nudt8 (nudt8,LOC107567678,LOC107720444)


Basic Information

Item Value
gene id nudt8
gene name nudt8,LOC107567678,LOC107720444
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 7680713 ~ 7684393 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258835.1
GTGTTTGAACAGTAGGCGGCGCCACGCGACAGCTGAAGATTCAAACACGCgccgaagaagaagaagccgCTTCTGTCACAACATCCGGTGAACACCATCGAGCTCGTCTAGTTCTTTTAAGGATGCTCAGGCCCCCACAGACGAAGGCTTGCTTGAATCGGCTCCGACCGGTGTTGACGGCCAGAGACGCTGGAGAACGGACGCTCTGCAGCCGCCCGCCCGAGCTCTTCTCCCCCGGCCCTGTTTCCCGAGCGTCCTCCTTGGCGCCGGACTCTTCCAGACGTGCGGGCCCCGGCGCTCGCTCCCTGTTGAGACGCCCCACGAACTCTCCGCACGCACCGGATCACGCCTCTCCCTCACGGAGCTCCACCAATCCAAGCAGATGGCAGAGCAGTTCAAACGGCTCGGGCGTCCTTTCGACAGCCGGGCTGCACAGGAGGGCCGCGGGGGACGAGTGCCTGTCCGCCGGGAACGAGGCCCGCTGCAGACGCTCTCTGCAGGCGAACGCCGCCCTGTACGCCGGGGAGAGGACGAGCTGGGCGGCGGTGCTGGTGTGTCTGTGCGCCGTGAGCGGGGACCCCGCGCTGCTCTTCACGCTCAGATCCGCCAAACTGAAGGGCCGGCACAAAGGAGATGTCAGTTTCGCGGGGGGGAAGAAGGACCCGTCTGACAGGACCGTCGTGGACACGGCTCTCAGGGAAGCGCGCGAGGAGCTGGGCGTCCTCATCGCTGAGGATCAAGTGTGGGGTGTGCTCAAACCGCTGCGGGACGTGTCTGGAATGATGATTGCACCGGTGATAGCCAATCTTGGACCTCTGGAGGCTCTCTCTTTTCGACCTAATCCAAGTGAGGTGGAGGAGATTTTTACCCTGACGCTTGAGCATTTATGTCAACCCCAAAACCGAGGCTACACGCACTTCCGCACGGGAGATCGGTACGGATACACCCTCCCGGTGTTTCTCGGCCCCAAGCACCGCGTCTGGGGCCTCACGGCGGTGGCCCTGGATCACGCGCTCAAGATCATAGTGCCCCGGGAGCAGCTGCTGGACCACAGCGCCGTTCAGTAGCACCTTCGGGAGAAACCTCTGGCTTTCAACTCGCCTTCGTGTCGTTCTGAAGCCATAGGACCTGCTTTcaccttcagaacacaaatcaaGATATTTCTGATCAAATCCCTCCAGAGACCATAAAACTGCCACCACAATCAAGACCCAGAATCATAGCAAGGATATCCAGCGCTCTCTCATGAACATTTCATACGTATTTcatgaggtggctaattcgtacatttacatgcaatttGTCTAGATCTTGTgctactcctaaaatacaaaGCGTCGTATGAATTTGCGCGAGCGAGGCCGTACCAGTTTGTAcgaataaaatatgcatgaattGCTGGGACATCAGTAAAACTGTTCATGTGATGTCAGCGGTTCAACTGTCATTTTACGAAGCTAAGAGAATGCCATTTGTgcgcaaaa
>XM_043258836.1
GTGTTTGAACAGTAGGCGGCGCCACGCGACAGCTGAAGATTCAAACACGCgccgaagaagaagaagccgCTTCTGTCACAACATCCGGTGAACACCATCGAGCTCGTCTAGTTCTTTTAAGGATGCTCAGGCCCCCACAGACGAAGGCTTGCTTGAATCGGCTCCGACCGGTGTTGACGGCCAGAGACGCTGGAGAACGGACGCTCTGCAGCCGCCCGCCCGAGCTCTTCTCCCCCGGCCCTGTTTCCCGAGCGTCCTCCTTGGCGCCGGACTCTTCCAGACGTGCGGGCCCCGGCGCTCGCTCCCTGTTGAGACGCCCCACGAACTCTCCGCACGCACCGGATCACGCCTCTCCCTCACGGAGCTCCACCAATCCAAGCAGATGGCAGAGCAGTTCAAACGGCTCGGGCGTCCTTTCGACAGCCGGGCTGCACAGGAGGGCCGCGGGGGACGAGTGCCTGTCCGCCGGGAACGAGGCCCGCTGCAGACGCTCTCTGCAGGCGAACGCCGCCCTGTACGCCGGGGAGAGGACGAGCTGGGCGGCGGTGCTGGTGTGTCTGTGCGCCGTGAGCGGGGACCCCGCGCTGCTCTTCACGCTCAGATCCGCCAAACTGAAGGGCCGGCACAAAGGAGATGTCAGTTTCGCGGGGGGGAAGAAGGACCCGTCTGACAGGACCGTCGTGGACACGGCTCTCAGGGAAGCGCGCGAGGAGCTGGGCGTCCTCATCGCTGAGGATCAAGTGTGGGGTGTGCTCAAACCGCTGCGGGACGTGTCTGGAATGATGATTGCACCGGTGATAGCCAATCTTGGACCTCTGGAGGCTCTCTCTTTTCGACCTAATCCAAGTGGAGGAGATTTTTACCCTGACGCTTGAGCATTTATGTCAACCCCAAAACCGAGGCTACACGCACTTCCGCACGGGAGATCGGTACGGATACACCCTCCCGGTGTTTCTCGGCCCCAAGCACCGCGTCTGGGGCCTCACGGCGGTGGCCCTGGATCACGCGCTC

Function

symbol description
nudt8 Predicted to enable hydrolase activity. Orthologous to human NUDT8 (nudix hydrolase 8).

NR:

description
PREDICTED: uncharacterized protein LOC106580825 isoform X1

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K18665 NUDT8; nudix motif 8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258835.1 True 1484 mRNA 0.57 5 7680713 7684393
XM_043258836.1 False 1011 mRNA 0.63 5 7681181 7684393

Neighbor

gene id symbol gene type direction distance location
nmd3 nmd3,LOC107750082,LOC107720439 coding downstream 42948 7628677 ~ 7637765 (-)
otol1b otol1b,LOC107551238,LOC107662588,LOC107567675,LOC107720408,LOC107703004,LOC107750108 coding downstream 65667 7606890 ~ 7615046 (-)
dnajc30b NA coding downstream 105261 7574565 ~ 7575452 (-)
srprb srprb,LOC107720437,LOC107708336,LOC107551302,LOC107573098 coding downstream 142314 7535595 ~ 7538399 (-)
shox2 shox2,LOC107709009,LOC107598669,LOC107703017,LOC107720426,LOC107661335 coding downstream 298605 7375213 ~ 7382108 (-)
tagln LOC107567684,LOC107703031,LOC107551297 coding upstream 19868 7704261 ~ 7709530 (-)
cbln18 LOC107551293,LOC107703013,LOC107720443,LOC107567681,LOC107680810 coding upstream 26484 7710877 ~ 7714385 (-)
cbln20 LOC107750124,LOC107703012,LOC107720430,LOC107567680,LOC107680811 coding upstream 34994 7719387 ~ 7720924 (-)
aadac aadac,LOC107750087,LOC107551291,LOC107720424,LOC107572522 coding upstream 43409 7727802 ~ 7739864 (-)
lxn lxn,LOC107573187,LOC107573184 coding upstream 113769 7798162 ~ 7808797 (-)
G104626 NA non-coding downstream 26530 7627413 ~ 7654183 (-)
G104634 NA non-coding downstream 31003 7645426 ~ 7649710 (-)
G104622 NA non-coding downstream 63238 7617231 ~ 7617475 (-)
G104607 NA non-coding downstream 101358 7577691 ~ 7579355 (-)
G104597 NA non-coding downstream 129828 7549934 ~ 7550885 (-)
G104663 NA non-coding upstream 95423 7779816 ~ 7805389 (-)
G104664 NA non-coding upstream 97190 7781583 ~ 7783581 (-)
G104666 NA non-coding upstream 108524 7792917 ~ 7793498 (-)
G104674 NA non-coding upstream 137513 7821906 ~ 7822376 (-)
G104678 NA non-coding upstream 212899 7897292 ~ 7897491 (-)
G104628 NA other downstream 40374 7639644 ~ 7640339 (-)
G104603 LOC107703035,LOC107750119,LOC107551239 other downstream 108623 7569846 ~ 7572090 (-)
mmp28 mmp28 other downstream 561427 7111256 ~ 7119286 (-)
G104011 NA other downstream 1534196 6146173 ~ 6146517 (-)
LOC122359408 LOC107744036,LOC107704290,LOC107562996,LOC107680065 other downstream 1879632 5794803 ~ 5801081 (-)
G104695 LOC107750114,LOC107701289,LOC107702996,LOC107720420,LOC107570341 other upstream 273443 7957836 ~ 7958231 (-)
nipsnap2 gbas,LOC106581053 other upstream 360429 8044822 ~ 8050710 (-)
zgc:114130 zgc:114130,LOC107758457,LOC107749642,LOC107678256,LOC107560624,LOC107684198,LOC107561367 other upstream 825989 8510382 ~ 8513459 (-)
LOC122359140 pnkp,LOC107561379,LOC107758514,LOC107672387,LOC107749649,LOC107678254,LOC107560617 other upstream 973295 8657688 ~ 8662864 (-)
LOC122359046 camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other upstream 1354503 9038896 ~ 9046115 (-)

Expression


Co-expression Network