lxn (lxn,LOC107573187,LOC107573184)


Basic Information

Item Value
gene id lxn
gene name lxn,LOC107573187,LOC107573184
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 7798162 ~ 7808797 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043259519.1
ATCTTGTTTGTTCAGATGTTGAGTGAGGAGCGCGTCATCTCTCGCTCGAGTTACGCAACGGTGCTCCTCTTTATAACCAGCAGCCGCTCGGGCCCCAGATCTTCTCCCGAGCGGATCATGAAGGCGTTCTGTGAGCTCTGTCTGCTTCTGTCTCTGGTCGAGCTTGGCCCGGCTCCGCCCGCGTCTCAGGGGCCGCCGCTGGCGTGCAGAGGGCCCACGGAGCCAGCGCTGCCACAGCCCGAGACGCCGGAGGACATGGCCGGCCCCGGGGACCTGGAGCCCACACACTTCCCGGCTCGGCGGGCGGCCACGGTGGCCCTGCACCGCCTCAACGTCGCCCACGGCTCGCCCTTCAGGGTGTTCGGCCTGCAGCAGGTGCACAAGGCCAGCGTGGAGGATGTGGCCGCAGCAGGCAGGAAGTACAGCCTGGACCTGTCGGTGACGGACTGGGCCGCTGGCAGCGCGggccCGGCGCTGCGCTGCTCGGCGGAGGTCTTGTTCTCCAGGACGGAGCAGAGCAGTGGTCCCGAGGTGCAGCTGCGCTGTGAGGCCCTGCAGAAGATCAACAGCACAGCCGAGGACCACGCTTTCTACCAGAAGTACCTCGCTCCCGCCAGCGCCGTCTCCGCTCAACACTTACCAGacagcTACGGTAACATGAGCGAGGAGATGCAGCCGTTCTGGCGCTTGGCTCGAGTGGCTGCGTCCTTCATCATGCTCCGAGAGTCCAGCGAGAACACCGAGTTCAACATGGCTCAGGTGGCCAGCATCACACAGCAGGAGTCGAGCGACAAGCAGCTGATGCTGGACTACGTGGTTCTTCTTCATGACCTGCCCTctcaggaGATCATTCAGTGGAAGCTGCTGGTGTCCTGGTCTCCAGACAGAGGCGTCAGGGTCCTTCAGACCGAGTGGCAGCCCAGATGTCCTCACGCCACCGAACCACCCAACTAACCCTGAGCTAACTAACCCGGTGCTGAACCTGTACTAAACCTGTACTGAACCTGTGCCAGACCAATAAAGACAGACCAACACA
>XM_043259520.1
CTGGAATGAATCGAACCTTTCAAAGCTCGATACGGGGGAAGAGTTGAGTTTTTAAGCGGAACCGGTTTGGTTTAGGATTCATCAGAGCTGTACCGGAGACGGTGTGTTTCTTGATTCGATCCGCTGCTTCTGCTGAAAGACGCCGGAGGACATGGCCGGCCCCGGGGACCTGGAGCCCACACACTTCCCGGCTCGGCGGGCGGCCACGGTGGCCCTGCACCGCCTCAACGTCGCCCACGGCTCGCCCTTCAGGGTGTTCGGCCTGCAGCAGGTGCACAAGGCCAGCGTGGAGGATGTGGCCGCAGCAGGCAGGAAGTACAGCCTGGACCTGTCGGTGACGGACTGGGCCGCTGGCAGCGCGggccCGGCGCTGCGCTGCTCGGCGGAGGTCTTGTTCTCCAGGACGGAGCAGAGCAGTGGTCCCGAGGTGCAGCTGCGCTGTGAGGCCCTGCAGAAGATCAACAGCACAGCCGAGGACCACGCTTTCTACCAGAAGTACCTCGCTCCCGCCAGCGCCGTCTCCGCTCAACACTTACCAGacagcTACGGTAACATGAGCGAGGAGATGCAGCCGTTCTGGCGCTTGGCTCGAGTGGCTGCGTCCTTCATCATGCTCCGAGAGTCCAGCGAGAACACCGAGTTCAACATGGCTCAGGTGGCCAGCATCACACAGCAGGAGTCGAGCGACAAGCAGCTGATGCTGGACTACGTGGTTCTTCTTCATGACCTGCCCTctcaggaGATCATTCAGTGGAAGCTGCTGGTGTCCTGGTCTCCAGACAGAGGCGTCAGGGTCCTTCAGACCGAGTGGCAGCCCAGATGTCCTCACGCCACCGAACCACCCAACTAACCCTGAGCTAACTAACCCGGTGCTGAACCTGTACTAAACCTGTACTGAACCTGTGCCAGACCAATAAAGACAGACCAACACA
>XM_043259521.1
GGGAGGAAAACAAGCacACGCCGGAGGACATGGCCGGCCCCGGGGACCTGGAGCCCACACACTTCCCGGCTCGGCGGGCGGCCACGGTGGCCCTGCACCGCCTCAACGTCGCCCACGGCTCGCCCTTCAGGGTGTTCGGCCTGCAGCAGGTGCACAAGGCCAGCGTGGAGGATGTGGCCGCAGCAGGCAGGAAGTACAGCCTGGACCTGTCGGTGACGGACTGGGCCGCTGGCAGCGCGggccCGGCGCTGCGCTGCTCGGCGGAGGTCTTGTTCTCCAGGACGGAGCAGAGCAGTGGTCCCGAGGTGCAGCTGCGCTGTGAGGCCCTGCAGAAGATCAACAGCACAGCCGAGGACCACGCTTTCTACCAGAAGTACCTCGCTCCCGCCAGCGCCGTCTCCGCTCAACACTTACCAGacagcTACGGTAACATGAGCGAGGAGATGCAGCCGTTCTGGCGCTTGGCTCGAGTGGCTGCGTCCTTCATCATGCTCCGAGAGTCCAGCGAGAACACCGAGTTCAACATGGCTCAGGTGGCCAGCATCACACAGCAGGAGTCGAGCGACAAGCAGCTGATGCTGGACTACGTGGTTCTTCTTCATGACCTGCCCTctcaggaGATCATTCAGTGGAAGCTGCTGGTGTCCTGGTCTCCAGACAGAGGCGTCAGGGTCCTTCAGACCGAGTGGCAGCCCAGATGTCCTCACGCCACCGAACCACCCAACTAACCCTGAGCTAACTAACCCGGTGCTGAACCTGTACTAAACCTGTACTGAACCTGTGCCAGACCAATAAAGACAGACCAACACA

Function

symbol description
lxn Predicted to enable metalloendopeptidase inhibitor activity. Predicted to be active in extracellular space. Orthologous to several human genes including LXN (latexin).

NR:

description
latexin-like

GO: NA

KEGG:

id description
K23594 LXN; latexin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043259519.1 True 1036 mRNA 0.63 7 7798162 7806556
XM_043259520.1 False 932 mRNA 0.60 7 7798162 7808522
XM_043259521.1 False 810 mRNA 0.62 7 7798162 7808797

Neighbor

gene id symbol gene type direction distance location
aadac aadac,LOC107750087,LOC107551291,LOC107720424,LOC107572522 coding downstream 58298 7727802 ~ 7739864 (-)
cbln20 LOC107750124,LOC107703012,LOC107720430,LOC107567680,LOC107680811 coding downstream 77238 7719387 ~ 7720924 (-)
cbln18 LOC107551293,LOC107703013,LOC107720443,LOC107567681,LOC107680810 coding downstream 83777 7710877 ~ 7714385 (-)
tagln LOC107567684,LOC107703031,LOC107551297 coding downstream 88632 7704261 ~ 7709530 (-)
nudt8 nudt8,LOC107567678,LOC107720444 coding downstream 113769 7680713 ~ 7684393 (-)
si:dkeyp-97b10.3 LOC107750093,LOC107551284,LOC107702998,LOC107701299,LOC107720419,LOC107577739 coding upstream 125458 7934255 ~ 7951212 (-)
ift80 ift80 coding upstream 151286 7960083 ~ 7979546 (-)
trim59 trim59 coding upstream 186786 7995583 ~ 7999227 (-)
med17 med17 coding upstream 209604 8018401 ~ 8024176 (-)
LOC122358760 LOC107551275,LOC107750107,LOC107720462,LOC107572376,LOC107689293,LOC107663740 coding upstream 543533 8352330 ~ 8381497 (-)
G104666 NA non-coding downstream 4664 7792917 ~ 7793498 (-)
G104664 NA non-coding downstream 14581 7781583 ~ 7783581 (-)
G104626 NA non-coding downstream 143979 7627413 ~ 7654183 (-)
G104634 NA non-coding downstream 148452 7645426 ~ 7649710 (-)
G104622 NA non-coding downstream 180687 7617231 ~ 7617475 (-)
G104674 NA non-coding upstream 13109 7821906 ~ 7822376 (-)
G104678 NA non-coding upstream 88495 7897292 ~ 7897491 (-)
G104683 NA non-coding upstream 94992 7903789 ~ 7919320 (-)
G104682 NA non-coding upstream 104668 7913465 ~ 7927594 (-)
G104696 NA non-coding upstream 149758 7958555 ~ 7958898 (-)
G104628 NA other downstream 157823 7639644 ~ 7640339 (-)
G104603 LOC107703035,LOC107750119,LOC107551239 other downstream 226072 7569846 ~ 7572090 (-)
mmp28 mmp28 other downstream 678876 7111256 ~ 7119286 (-)
G104011 NA other downstream 1651645 6146173 ~ 6146517 (-)
LOC122359408 LOC107744036,LOC107704290,LOC107562996,LOC107680065 other downstream 1997081 5794803 ~ 5801081 (-)
G104695 LOC107750114,LOC107701289,LOC107702996,LOC107720420,LOC107570341 other upstream 149039 7957836 ~ 7958231 (-)
nipsnap2 gbas,LOC106581053 other upstream 236025 8044822 ~ 8050710 (-)
zgc:114130 zgc:114130,LOC107758457,LOC107749642,LOC107678256,LOC107560624,LOC107684198,LOC107561367 other upstream 701585 8510382 ~ 8513459 (-)
LOC122359140 pnkp,LOC107561379,LOC107758514,LOC107672387,LOC107749649,LOC107678254,LOC107560617 other upstream 848891 8657688 ~ 8662864 (-)
LOC122359046 camkk1b,LOC107758636,LOC107592750,LOC107752383,LOC107694030,LOC107582651,LOC108410854 other upstream 1230099 9038896 ~ 9046115 (-)

Expression


Co-expression Network