G108154 (LOC107694807,LOC107755381,LOC107582218,LOC107739770,LOC107704708,LOC107585797)


Basic Information

Item Value
gene id G108154
gene name LOC107694807,LOC107755381,LOC107582218,LOC107739770,LOC107704708,LOC107585797
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 19730739 ~ 19735234 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU159770
GTAATTGATACGGATGTTCTCTGGTCAATGTGATGGTGAATCCATTCACAGTCACATTGACAGTGTGAGTGAAGCTCACTGCATTGCTCCATCGATGATCATTCTTAACTGTCACGTTAAAAGGCACAAGACTTGTATTAGCAATACATAGTGCTGCCAACTGATACACACACGTGCCCTGGAAATCATAATGGAGTCCGTCGAATGTGCGGTAATGTGGGTCCACTGAGCCTGTGCATATGGCGGGGCGACTTACTGGCCGACAACTGCGACTTCCATTAACAACTGAGCAGCTCTCACCGACGGCACAAGAAGATTCCCGACAAACCACAACTCTCAAATTACGGTCACACTCGCAAAGCCGATGACACTGCTCATCGGCCCAGAAGGTTTGGCCTTGTTGGTAGTAGGCGCCTTCGTAGAAGCAGCCACATTGATTTGTGGGCACACAAACACCAGCGCTGAGGACAAATCCGCTGTTACACACACAGGCTTCCACACAGGTCTCACTGCAGTTTAGCTGCTGATTTGGGTAAGGGCATGTCACTGGACACGGAGACGCACAGGCCTCATAATGACTGTTGGACGGGCA

Function

NR:

description
PREDICTED: IgGFc-binding protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU159770 True 592 lncRNA 0.50 2 19730739 19735234

Neighbor

gene id symbol gene type direction distance location
gmnc gmnc,LOC107704691,LOC107683460,LOC107739787,LOC107721147,LOC107587788 coding upstream 81033 19645509 ~ 19649706 (+)
masp1 LOC107586740,LOC107704738,LOC107739768,LOC107721148,LOC107683390,LOC107582221 coding upstream 113137 19607164 ~ 19617602 (+)
sst1.1 LOC107586749,LOC107582287,LOC106579799,LOC107704709,LOC107683458,LOC107721142 coding upstream 134436 19595005 ~ 19596303 (+)
sst1.2 sst1.2,LOC107739785,LOC107704710,LOC107683457,LOC107721144,LOC107582289 coding upstream 148724 19580539 ~ 19582015 (+)
col4a3 LOC107586745,LOC107704742,LOC107739767,LOC107683429 coding upstream 151879 19550700 ~ 19578860 (+)
kirrel3l kirrel3l,LOC107704734,LOC107739776,LOC107585713,LOC107755386,LOC107582216,LOC107694809 coding downstream 220754 19955988 ~ 19997163 (+)
aplp1 LOC107755388,LOC107683668,LOC107704731 coding downstream 292137 20027371 ~ 20074259 (+)
LOC122359578 NA coding downstream 339418 20074652 ~ 20086581 (+)
LOC122358428 LOC107683669,LOC107709782,LOC107701556,LOC107709781,LOC107739789,LOC107704729,LOC107585717,LOC107585716 coding downstream 358080 20093314 ~ 20095157 (+)
LOC122358430 LOC107683669,LOC107701556,LOC107709782,LOC107585716,LOC107704729,LOC107739789,LOC107585718,LOC107585717,LOC107709781 coding downstream 365486 20100720 ~ 20102104 (+)
G108124 NA non-coding upstream 40788 19689163 ~ 19689951 (+)
G108055 NA non-coding upstream 194892 19488226 ~ 19535847 (+)
G108058 LOC107704741,LOC107586757,LOC107683428,LOC107730819 non-coding upstream 213265 19514981 ~ 19517474 (+)
G108011 LOC107752015,LOC107683384,LOC107582227,LOC107586802 non-coding upstream 503357 19222740 ~ 19227382 (+)
G107996 NA non-coding upstream 509687 19171887 ~ 19221052 (+)
G108207 NA non-coding downstream 178915 19914149 ~ 19914443 (+)
G108211 NA non-coding downstream 263380 19998614 ~ 20055894 (+)
G108217 NA non-coding downstream 279579 20014813 ~ 20016629 (+)
G108231 LOC107571392,LOC107701561,LOC107740055 non-coding downstream 406571 20141805 ~ 20142372 (+)
G108240 NA non-coding downstream 435535 20170769 ~ 20233185 (+)
LOC122358990 LOC107586958,LOC107704764,LOC107752630 other upstream 734748 18993345 ~ 18995991 (+)
G107777 NA other upstream 886884 18842276 ~ 18843855 (+)
si:dkey-30e9.6 LOC107683422,LOC107752859,LOC107588226,LOC107704721,LOC107582296,LOC107730865 other upstream 934757 18794080 ~ 18795982 (+)
G107757 lsr,LOC107704772,LOC107587109,LOC107752648,LOC107683161,LOC107730812 other upstream 970242 18759582 ~ 18760497 (+)
G107756 LOC107752648,LOC107704772,LOC107587109,LOC107582275,LOC107683161 other upstream 971903 18756343 ~ 18758836 (+)
G108245 psenen,LOC107745203,LOC107675859,LOC107585723,LOC107701557 other downstream 448886 20184120 ~ 20249972 (+)
G108230 hspb6,LOC107675875,LOC107745202,LOC107571389,LOC107701566,LOC107747664 other downstream 453799 20189033 ~ 20254271 (+)
LOC122359185 LOC107742015,LOC107699248 other downstream 472936 20208170 ~ 20215479 (+)
G108431 LOC107698865,LOC107576883,LOC107559186,LOC107741632 other downstream 1476576 21211810 ~ 21214493 (+)
LOC122358705 NA other downstream 1989170 21724404 ~ 21726266 (+)

Expression


Co-expression Network