slc8a2b (slc8a2b,LOC107670115,LOC107725154,LOC107585757,LOC107558827,LOC107669914)


Basic Information

Item Value
gene id slc8a2b
gene name slc8a2b,LOC107670115,LOC107725154,LOC107585757,LOC107558827,LOC107669914
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 22360038 ~ 22443692 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258698.1
TTTCCACCGCACGAGAGAGTGAAACACAACAGAGTCAAACCGCAGAGAGACACACGCATCAGCACAAGCGGAGCAGCTTTCAATGAATGAGCCGGCGGCAGCAACATGCGCTTCTCAGCCACGCCTGCCTTGAACAACACCGCAAACTAGGATACAAGGTCCCCCGGCGGGCTGGTTCCTCTCCGTCTTGCATCACCTCCTTtatctcttctcctcctctgaaCTCCGAAGCCCTTTGAGGACCGAGGCCATGGCACCGTTTTCCTCTCCCGTCCTCCTCCTGTCTCTCGTCCTCCTCCTTTCTCTGCCTCGATCCATTTCTCCCGAATCCCAGCGAGAAGAGCCGTCTCTGCAGCCCTCCGTCGCTCCAGAAGCTCCTTCAGAACTTCAGAGTAACCTGACCGATGAAGGCGACGGCGCTGCTCCGAACAAACCGTGCACCGATCTGGTGGAGTGCAGGCCTGGGATCATCCTGCCTGTGTGGAAGCCCGTCAATCCCGGTCTGGGAGAGCAGATCGTCCGGGCCGTCGTGTATTTCGTCTCTCTCATGTACATGTTTCTGGGGGTGTCCATCATCGCTGATAGGTTCATGGCATCTATAGAGGTCATCACGTCACAGGAGAAAGAGGTGACCATAACCATGCCAAATGGAGAAACGTCAGTGGCCACGGTCAGAATCTGGAACGAGACCGTGTCTAATTTGACCCTGATGGCTCTGGGATCATCCGCCCCTGAAATCCTGCTGTCGGTCATCGAGgTGTGTGGTCATGGGTTTGAGTCCGGTGAGCTGGGTCCGGGCACCATCGTGGGCAGCGCTGCCTTTAATATGTTTGTGATCATCGGAATCTGTGTGTGGGTGATTCCTGACGGCGAGGTGAGGAAGATCAAACATCTGAGAGTCTTCTTCATCACCGCCTTCTGGAGTATCTTCGCTTACATCTGGCTGTACCTGATCCTGTCCATCATCTCACCTGGAAtcgtggagTTATGGGAAGCTCTGGTCACTCTCTGCTATTTCCCCGTTTGTGTGATTCTGGCCTGGATCGCTGACCGGCGCCTCCTTTTCTACAAGTATATGTCCAAGCGCTACCGTGCTGACAAAAGAACAGGGGTTGTTGTTGAGACCGAGGGGGACATGACCCCCAAAGGTATGGAGTTGATGATGGATGGCAAGTTTCCACTGAGGGGCGGAGCCATAGGGATCGGCATACAGGAACATTACCAGGATGGAACGGGCAACACAACAGGGACCATGGCAACTCTACCCAACTCTAACAGCACGACCGTTTACATGGATGGTGCCAAGGACCTGGACGAGAGCCGCAAAGAAGTGATTCGTATCCTGAAGGACCTTAAGCAGAAATACCCAGATAAGGAGTTGGATCAACTGGTGGAATTGGCCAACTACTACGCCCTCCTCCATCAGCAAAAGAGCCGTGCTTTTTATCGCGTCCAGGCCACACGCATGATGATCGGGGCCGGTAATGTACTGAAGAAACACGCAGCAGATCAATCTCGCCGTGCTGTTGTGGCGGGTGGTGATGAAGCTTCAGAGGAGGATGACCTGGCCGTCTGCAGCCGTATCTCCTTCGAGAGCCCACACAGTCAGTGTATGGAGAACTGCGGCTCCATCATGATACCCGTGGTGTGTCGAGGAGGCCTGGGGGAGAGCACTTTCTACATTGACTACTGTACGGAAGACGGCACAGCCAATGCCGGCTCAGATTATGAGTATTGTGAAGGGACACTGGTGTTCAAACCAGGAGAAACCAGGAAAGACATAAAGGTGGGCATCATTGATGATGACATCTTTGAGGAAGACGAACATTTCTTTGTGCGTTTGCTGAACCTGCGTGTTGGTGATGCGGAGGGTATGTTTGAGAGTGACGATGCGGATCAGGCTCCCAAGGCCCGGTTGATGGAACCGCTGATGGCCACGGTCACCATCCTGGATGACGACCACGCAGGTATCTTCACTTTCACGGACCGCCTGATGCGAGTGAGCGAGAGCGTGGGAACCATGGAGGTGACAGTAGTCCGGAACTCCGGCGCTCGAGGAACCGTGATCATTCCGTATCACACGGAGCCCGGGACGGCCCAAGGTGGAGGGCTCGACTACGAGGACACACACGGAGAGCTGGAATTCACCAACGACCAAACAACTCAGACCCTTCAGGTGAGGATCATTGATGATGAAGAGTACGAGAAACATGAGAATTTCTTCATCGTTCTTGAGGAACCACGCTGGCTGAAGAGAGGAATCTCagCCCTGCTGCTGAACCAAGAAGATCCCGAGGGACAGCTGAGtgctgaggaggaggaggccaGGAGGATAGCGGAGATGGGGAAACCTGTTCTGGGAGAGCACAGCCGGCTGGAGGTGGTGATCGAGGAGTCCTATGAATTTAAGAGCACCGTTGATAAACTGATCAAGAAGACTAACCTGGCTCTGGTGATCGGCACTCACTCCTGGAGAGAGCAGTTCGTGGAGGCCGTGACCGTCAGCGCAGGCGACGGAGATGAAGACGAAGAGGAGGGTCGAGAGGAGCGTCTCCCGTCCTGCTACGATTACGTCATGCACTTCCTGACGGTGTTCTGGAAGGTTCTGTTCGCGTTCGTTCCTCCCACGGAGTACTGGAACGGCTGGGCCTGTTTTTTGGTGTCCATCACTGTAATCGGCCTCCTCACCGCCATCATCGGAGACCTGGCGTCACACTTCGGCTGCACCGTGGGCCTCCGGGACACCGTCACCGCCGTGGTGTTCGTCGCTCTGGGCACCTCTATCCCAGACACATTCGCCAGTAAAGTCGCCGCTACTCAGGATCAGTACGCAGACGCCTCGGTGGGAAACGTCACGGGCAGCAACGCCGTCAACGTGTTTCTGGGCATCGGCGTGGCCTGGTCCGTGGCAGCCGTGTACTGGGGCGTCCAGGACAAGAACTTTCATGTGgagcccggctcgctggccttCTCCGTCACCCTCTTCACTATCTTTGCCTTCATCTGCATGGCTGTGCTGCTGTTCCGGCGCCGGCCGTCTATCGGCGGAGAGCTGGGCGGCCCTCGGGTCTCTCGTCTGCTCACTACGCTCCTCTTTCTTGGTCTGTGGTTCCTCTACATCCTCTTCTCCAGCCTTGAGGCCTACTGCCATATCGAGGGCTTCTGAACACGCTtatatcaacaaaacaaatctaaagAGGTTTCGATCAACTACACACATCAACACaagtttgcacacacacacacacacacttacaaaacACTTATGAATCGCTGAATGCACTAATGCAAATCGTTCGACTTAGCCGAGAATCTGaggtgaaagagaaaaagagacggATGATGCTGGAGGGAGATGAAAGATGAGTTTATGAAAAAGGAAGCAAAGCATGTAGCAAAAGAGGGCGAAGATGAGCGCGATGCACTGTAAAGAGGGAGCGATGCTGTAAAATAGCGACACTTCTATATTGCCGTCTCTCAAGCTCAAAGGCAAAATTGACCACTTTTATTTCGCACTGCACGTAACAGGACTTTTTATGGTTCAAGGGCACAATGAATCTGAGTAAAGATAAAAGGCGCGTTAAGAGCTATAGTGATGGCATTTTAGATGCTAATGAAAATGCACCAGCAATCGTGCTGCTCGACCGATCCGCAGTTTCGCTTGCGACGCGCATTATTCCGCGCTAAAGCAATCATTTATGATTGTTGCTCGTGCAAAAATGGCCGTAGAGTTCTTGAGTAAAAAACAAGACGGATTGAAAGTTGTCACGTGGACTTTAAGCATGGAGAATTACGTTAGACCCCGGCATTGAATATGCACATTAGGATATGTTGTCATTTTCTAGGgcttcttattttaatatttaataaataacaatgcaGTCTGGTGCGACTGCACGTAGCTTTGAAATGATTCCACGTAAAACCAAGCACGCCGTTTGGCTAACGTTGCCAATTGTTCGCCTGCTTGATGACGGAACTGGGCAAAATCAaagttaaagtgcccctgttatccgttttttaaaaatacatccatCGATAACGTCCTGCAAAGGTACAGTTATCGtatctcaaaagaaagagtcgattCTGAATCGTTGAAGCGAATCATTTTTGAAATGAGTCACAAGACGAGTCCTTGCATGCATTTCATCCTGTTTTTGGACTCCCAAACCAAAACATGAACATTTCATAACCCATTATAAGGGACACTTTAATAGTAATGTGAAGATAATactaaataatcaaatattgtaCGTGAATACGTCAAATGGAGACTCCAAGACTTTCAGTTGCTtcctgaaatgacaaaaaaatcattttaattgcattttaatgctacaattatactaaatataaacgtttagaacaaaataataataaaaatagtcatattatactcctttttttttttaaatatgaaatattggCCGTTTTTACAACCTTATTGGTATGTAAATATACCACTGATCTCACAGTCTACTTTTTTTTAGACTCATCAGACACAGTTGTGCTctacaatgaaaatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatatgcaaaaatagtctggcttaaagtgatagttcacccaaatgaaatgtgtcatcatttactcaccctcaagttgatccaaacctgtatgatatTTTATGATTGTCGGTGACCAAAAAGTTGTTGGTAGCAGCATTAGCTCATGGACGGGAGATTAATTGAAGATGGAATTAGAAAGTTATCCATTAGAAAAGGTCCAGTATTCCGCTAGATTATCCTTCATCATCCGATcgggtcatttttaaaaaaaaattgaggaTTCATCTCACACCGAAtccagatacttttttttttacatgactgCCTATTCTACACCTCAACAATCCTTCTAATCCAACGAACGAAACATCTTATGACTTTGCAATTACTGGGATCTTCTGAAACAGACCACTGAACATCGTAACGGTTTGAATCTTCAGTTGTTACATTTATTCCGAAACGGAACACTCGACATCATAATGATTTGGATCTTCGGTTGCTGCATTCATTCCGCGCTTTCGCTGCCTAGAGACAATGGAGCTCctcttttaaaagtgttaatgtaaaaaaaaaaaaatagtcgtCACCTCCGTATCTCCAACGGCCAAAACATGCGCGCTAAACATAGCAGTGTTCAGAGTACGCTAGGAATAAAAGACAGCTCTGTCGATGCTTGCAGTGGCTGAATGGGTACCGTTAAAGTAACTCTCAATACAAGTTTATTAAAAGAGCAAATGATTTGGGTGTCTACGGTACACAAACTGAAGCTCGCGTTCATTCGATGTATCCAATGACTTCAAAAAGTTCTCATAACGAAGCGCTGAAGTCAAAATGTCACTGTACAGTTTCTCTCTGCATTGTGTAAACCTGTCTGGGGCTTCTTGATCTAGAACAATTAAGTGCTGCCCGGTGATTGGTTCTTTATAAACACTTTAGCTGGTTGGTCCACTCGTTATGTGTGGAgctgaaagctgattggtcCCTGACAGATTcacaataaaatgttgtttactcGTAGAGCACTCAG

Function

symbol description
slc8a2b Predicted to enable calcium:sodium antiporter activity. Predicted to be involved in calcium ion import across plasma membrane and sodium ion transmembrane transport. Predicted to act upstream of or within cell communication; metal ion transport; and transmembrane transport. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be active in axon; postsynapse; and sarcolemma. Predicted to be integral component of plasma membrane. Is expressed in brain; eye; and ovary. Orthologous to human SLC8A2 (solute carrier family 8 member A2).

NR:

description
PREDICTED: sodium/calcium exchanger 2-like

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0006816 calcium ion transport biological_process
GO:0007154 cell communication biological_process
GO:0016021 integral component of membrane cellular_component
GO:0005432 calcium molecular_function

KEGG:

id description
K05849 SLC8A, NCX; solute carrier family 8 (sodium/calcium exchanger)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258698.1 True 5592 mRNA 0.48 14 22360038 22443692

Neighbor

gene id symbol gene type direction distance location
grik1b grik1b,LOC107670116,LOC107669874 coding upstream 34331 22295316 ~ 22325707 (+)
LOC122358830 LOC107722268,LOC107585749,LOC107670104 coding upstream 66649 22289930 ~ 22293389 (+)
cldn8.1 cldn8,LOC107722270,LOC107670101,LOC107705635,LOC107669885,LOC107578419 coding upstream 71368 22286790 ~ 22288670 (+)
LOC122358834 zgc:110333,LOC107722269,LOC107670094,LOC107585751,LOC107669883,LOC107705634,LOC107558842 coding upstream 76006 22282680 ~ 22284032 (+)
LOC122358842 NA coding upstream 80810 22277988 ~ 22279228 (+)
acsl3a acsl3a,acsl3,LOC107585759 coding downstream 3902 22447594 ~ 22471189 (+)
kcne4 LOC107669903,LOC107725203,LOC107733928,LOC107558850,LOC107670090 coding downstream 30312 22474004 ~ 22475711 (+)
scg2a LOC107585745,LOC107670131,LOC107725137 coding downstream 46192 22489884 ~ 22493619 (+)
dhrs12la flj13639,LOC107725108,LOC107670134,LOC107669913,LOC103025652,LOC108433977,LOC108278219 coding downstream 55454 22499146 ~ 22507783 (+)
zgc:85932 NA coding downstream 103661 22547353 ~ 22569791 (+)
G108723 NA non-coding upstream 4125 22340732 ~ 22355913 (+)
LOC122358849 NA non-coding upstream 10408 22346451 ~ 22349630 (+)
G108721 NA non-coding upstream 36418 22265832 ~ 22323620 (+)
G108713 NA non-coding upstream 181408 22177392 ~ 22178630 (+)
G108654 LOC107739918,LOC107722272,LOC107722276,LOC107558836,LOC107669876,LOC107585787,LOC107696356,LOC107565148 non-coding upstream 323200 22028437 ~ 22036838 (+)
G108743 NA non-coding downstream 58079 22501771 ~ 22511258 (+)
G108740 NA non-coding downstream 79058 22522750 ~ 22564181 (+)
G108762 NA non-coding downstream 89180 22532872 ~ 22533227 (+)
G108777 LOC107731820,LOC107570111,LOC107737423,LOC107670127,LOC107558840,LOC107669915 non-coding downstream 144243 22587935 ~ 22648345 (+)
LOC122358854 NA non-coding downstream 175984 22619676 ~ 22629112 (+)
G108573 NA other upstream 622351 21736680 ~ 21737687 (+)
G108572 LOC107745176,LOC107698871 other upstream 624320 21735014 ~ 21735718 (+)
G108571 NA other upstream 626931 21731981 ~ 21733107 (+)
LOC122358705 NA other upstream 633772 21724404 ~ 21726266 (+)
G108431 LOC107698865,LOC107576883,LOC107559186,LOC107741632 other upstream 1145545 21211810 ~ 21214493 (+)
G108951 LOC107560855,LOC107670124,LOC107731823,LOC107558828,LOC107669926,LOC107706052 other downstream 331957 22775649 ~ 22777725 (+)
G108990 NA other downstream 505448 22949140 ~ 22953513 (+)
msantd4 msantd4,LOC107566896,LOC107725759,LOC107670113,LOC107689580,LOC107756207,LOC107560841 other downstream 512019 22955711 ~ 22959679 (+)
G109132 NA other downstream 803083 23246775 ~ 23271291 (+)
G109193 NA other downstream 1065740 23509432 ~ 23510315 (+)

Expression


Co-expression Network