LOC122358967 (LOC107672075)


Basic Information

Item Value
gene id LOC122358967
gene name LOC107672075
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056713.1
NCBI id CM032082.1
chromosome length 23709629
location 16849447 ~ 16854802 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043258982.1
ctgATGAGCATTTTTAAGTAACAGATCACTGaaatatgtttctgttggaTAAAAACTATAGTGgtaatgttttgaataaatgtatgttAGTGTACATATTCAAGAATTTGATATGtgccatttgtttttatttaacaatatctCCCACCAGGCACTGGATGTCTATATAACGTCAGATTGATGTTGGACATGTTGTGTTGTGTGCCTGCTGGCTATTTTGAGTAATTGTGGGATGTAGGTGGGTTTCTGTGTTaagaatttagaaaaaatacttgaaatacTGCTTGTCAGCaattgaaaacaacaacaacaacaacaacaacaacaacaactagtACCTAAATAGTACTTTTGAAATGATCCCTGGCCAGTTTTTGTACCTTATCCCTAAAGATTGCATGTATGCTctagttttgtgttttagttatCTTGCAGACAGTATGTCCAGGTAATTTCCACATAGGTATATCTATCCAGAAATCACAAATAATTATACTGTATACCTAGATATCCATCAATGTTTGTGTCCCTTACATGCAGTTTTGGTCATATCatgttcttcagtgtcactGTTATGCCAAAAGTAGCCATACATGACTGTCTCTTGTTATTCGTTTTCATTTTAGATGTCAAGGTAGATTGCCGTTATTTCCAGGAAAGGATATCTACCCAAAATTGTGTATACACTACATATAATATATGGGTGGGCTTAAAATGAGAGTTATATTTAGGCTACTCAACCTCATGCTCTACCATCCTTGATGCTCCAACCTTGGTCTTGAACACCAGGCTAAAGCAACTGGAAGAATGGCAGATTATCAGATGACAATTCATAAACAAACAATCCAAGTTACATCAATCGAGGGAGGCTTGCAGGAAGGGAAGAGTATTATCATAGTTGGAAGGATTGTGCCAGATGCTAACAgATCACATGTGATCCTTCAGTGCGGTTCAGATTCTAAGGCTGATATTGCTCTGTGCATAAACCCACGCTACGAGAAAGGCAGTGCACGAGTAATGTACAACACCTACAAGAACGGCGCCTGGGGCTCCGAAAGATCCACACCTGAGTCTCCTATCGTCAAAGACAAACCATTCGTCATCGAGATTCTCGTCACCAAGGAGGCATACAAGATAAGCATCAATGGGAAACACTTAATGGACTATGAACACCGTATTCCAGTCATTCAAGTGAACACCATCTCGGTGGACCAAAACATCAAGCTGGAGTTCACTGGCTACCAGAATTCTCTgGTGGTCCCATACAAAACCCTGATTAATGGTGGGCTACAGCCTGGcaaaaaaatggttatttatgGAGTTCCTAATGCTGACTCTAAAAGGGTCGAGTTTAATCTACGTCACAGGTATGGGATTGCATTTCACTACCTATCCCTTTTTGATGAGAATGTGGTTGTCTGCAATACCTATGAGAATGGAAGATGGGGGACAGAAAAAAGGAGTGCAGCTGTGCCTTTTATAAAAGGTCATCTGTTTCAGGTCAAAATCATCTGCAACAGAGAGCATTATGAGGTGTTTGTGAATGGAGTGAAAGTGCACACTTACAAGCATCGCTTTACTAAGCTGGACGACGTTGATGTCTTTGAAGTGCATGGACAGCTGCAGCTGATTTTTGTGAACATCTAACAATCATCCAGGTTCCACAAATAAACCTGATTAAAAATGCACTAGGTCAGATAAATTCAACTGgtcaaatatattttgctgGTGATAACTTTATAATTATCATAAATTTCATATCTAATTTTTTCACTCTTTTGCACTTGAAATTGAAGATGCAAGTGACTTTCATGATTCGATGCTTTGGTAGTTTTCAGTTCAGGGCAAGGGTTTCTTATGATATAATTACTGATTTCCCACCTAGTTCTTAACTATAATTCTTAAACAAATTCTGCAGGTAATATCTTGCCTATCCAACCTGTTTTTCTGTGACCCTGCTGCCCCTATGAGCACTTCTTGTCAGTGACCATACTATGATTTAGCTAATTTTGTAgcattgcatccaaaataaataaaattc

Function

NR:

description
PREDICTED: galectin-9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043258982.1 True 2041 mRNA 0.38 7 16849447 16854802

Neighbor

gene id symbol gene type direction distance location
LOC122358464 NA coding downstream 2417 16843727 ~ 16847030 (-)
akap1b akap1b,LOC107587463,LOC107746655,LOC107592918,LOC107672073,LOC107683393 coding downstream 65579 16770502 ~ 16783868 (-)
LOC122358647 wscd1,LOC107756514,LOC107682602,LOC107666180,LOC108432998,LOC107714157 coding downstream 512695 16316642 ~ 16336752 (-)
samsn1a LOC107714174,LOC107682540,LOC107589736,LOC107588143,LOC107756545 coding downstream 789725 16049164 ~ 16059722 (-)
hspa13 hspa13,LOC107666191,LOC107714176,LOC107682527 coding downstream 802096 16043268 ~ 16047351 (-)
LOC122358648 LOC107672096,LOC107746653,LOC107746654,LOC107672110,LOC107587388,LOC107682756,LOC107756325 coding upstream 1229 16856031 ~ 16867677 (-)
ksr1b LOC107746652,LOC107592917,LOC107587380,LOC107682697 coding upstream 13943 16868745 ~ 16899914 (-)
wsb1 wsb1,LOC107756317,LOC107746651,LOC107682796,LOC107587373,LOC107672108,LOC107592922 coding upstream 50869 16905671 ~ 16917813 (-)
cuedc1b cuedc1b,LOC107587359,LOC107672109,LOC107682807,LOC107746650,LOC107757269,LOC107592934 coding upstream 65027 16919829 ~ 16941815 (-)
vezf1b vezf1b,LOC107756309,LOC107672112,LOC107587351,LOC107682824,LOC107592962,LOC107746692,LOC108425912 coding upstream 88380 16943182 ~ 16956170 (-)
G107217 NA non-coding downstream 565271 16164441 ~ 16284176 (-)
LOC122358383 NA non-coding downstream 700709 16141997 ~ 16148738 (-)
G107208 LOC107587564,LOC107714172,LOC107666194,LOC107682571,LOC107756533,LOC107589737 non-coding downstream 728895 16115547 ~ 16120552 (-)
G107205 NA non-coding downstream 777346 16071892 ~ 16072101 (-)
G107090 NA non-coding downstream 1018266 15828688 ~ 15831181 (-)
G107429 NA non-coding upstream 220828 17075630 ~ 17075857 (-)
G107431 NA non-coding upstream 228919 17083721 ~ 17084238 (-)
G107435 NA non-coding upstream 250312 17105114 ~ 17105384 (-)
G107448 NA non-coding upstream 453848 17308650 ~ 17315028 (-)
G107474 NA non-coding upstream 633466 17488268 ~ 17488488 (-)
nf1a nf1,nf1a,LOC107682681,LOC107672107 other downstream 7709 16785025 ~ 16841738 (-)
msi2b msi2b,msi2,LOC108425902,LOC107682662,LOC108435815,LOC108277875,LOC107587484,LOC105028669,LOC106603292 other downstream 87383 16551191 ~ 16762064 (-)
LOC122359003 LOC107714165,LOC107588126 other downstream 423033 16412636 ~ 16426414 (-)
ly6d si:ch211-207n23.2,LOC107587620,LOC107683433,LOC107666183 other downstream 785707 15955009 ~ 16063740 (-)
xaf1 LOC107714184,LOC107578343 other downstream 938973 15907362 ~ 15910474 (-)
LOC122358654 msi2b,LOC108425902,LOC107587484,LOC107666187,LOC107682662,LOC107756385,LOC107592958 other upstream 208606 17063408 ~ 17075480 (-)
LOC122359261 msi1,LOC107712472,LOC107550984,LOC105899087,LOC107687968,LOC107753116 other upstream 231857 17086659 ~ 17101997 (-)
G107442 NA other upstream 342487 17197289 ~ 17199728 (-)
hsph1 NA other upstream 623462 17478264 ~ 17489834 (-)
frem2b frem2b,LOC107704782,LOC107730863,LOC107582282,LOC108433801,LOC107683412,LOC107752721,LOC107587905,LOC108277768 other upstream 1008644 17863446 ~ 18149659 (-)

Expression


Co-expression Network