G114103


Basic Information

Item Value
gene id G114103
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 18560214 ~ 18560969 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU168457
AATTATCTTTGCAGGAACCcctgtaaaacattaaatgtaatattctaAGGTTTTCAGAAGGAACTCACAGAAGTAAGGGTGGTCCATGGCCTCGCGGGCTGTCAGTCGGGCCTGGTGGTCATAACGTAGCAGCTTATCCAGAAAATCCAGAGCCTCAGTACTGACCAGGTGCTGGTTCTCACTGTGCACAAACCGTTCCCATCTCTTCCTGGAGTGTCTGCCAAAATGTCATTAAAGCGTGGGTCCAGCTCAATGTTATATTTGTCGATGTAGTCATACAGGTCCTCTGTACCCAGAACCTTTGCAATTCGAACCAactagaaagaaaaataaatcacctcAGAAACTAAATTCAACAAACAAATACCCAGCATATTAAAACAagcaattatttgtttttgcaaatttgcACAgcaaatttatgaattaatcaGTTGAATGACTGAACATACctgctatttgtttttaataagtctgttcatgtttaaaaaaaataaataaataaacattatataaccTGATCATAGTTGTCATGTCCATGGAAAAATGGTTCCTTCCTGAAGATCATACTGGCCAGCATGCATCCAAGACTCCACATATCCAAACTGTA

Function

GO: NA

KEGG:

id description
ko04966 Collecting duct acid secretion
ko04721 Synaptic vesicle cycle
ko05110 Vibrio cholerae infection
ko05323 Rheumatoid arthritis

RNA

RNA id representative length rna type GC content exon number start site end site
TU168457 True 610 lncRNA 0.39 2 18560214 18560969

Neighbor

gene id symbol gene type direction distance location
scxb scxb,LOC107714619,LOC107704851,LOC107724780,LOC107672140,LOC107552813,LOC107576100 coding upstream 17577 18539263 ~ 18542637 (+)
fam210ab fam210ab,LOC107587812,LOC107704893,LOC107741733,LOC107723107,LOC107671697,LOC107598002 coding upstream 320889 18232044 ~ 18239325 (+)
mc2r LOC107704892,LOC107741732,LOC107587907,LOC107598023,LOC107723103,LOC107672129 coding upstream 338278 18221031 ~ 18221936 (+)
pear1 pear1,LOC107741736,LOC107587815,LOC107704888,LOC107671660,LOC107597999,LOC107732476 coding upstream 365404 18160023 ~ 18194810 (+)
tmem79b tmem79b,LOC107741741,LOC107704887,LOC107587819,LOC107732471,LOC107597995 coding upstream 416235 18139916 ~ 18143979 (+)
ndrg1b ndrg1b coding downstream 31299 18592268 ~ 18596824 (+)
LOC122360632 LOC107672171,LOC107552811,LOC107724789 coding downstream 48013 18608982 ~ 18612472 (+)
LOC122360004 fkbp14,LOC107596753,LOC107743226,LOC107685615,LOC107550815,LOC107745381 coding downstream 110990 18671959 ~ 18673711 (+)
LOC122360773 LOC107666789,LOC107600495,LOC107705096 coding downstream 122350 18683319 ~ 18684515 (+)
LOC122360227 LOC107592439,LOC107714343,LOC107666800,LOC107719142 coding downstream 143434 18704403 ~ 18751686 (+)
G113988 NA non-coding upstream 182573 18320745 ~ 18377641 (+)
G113969 NA non-coding upstream 275450 18284154 ~ 18284764 (+)
G113954 lmna,LOC107741735,LOC107587813,LOC107704890,LOC107598000,LOC107671682,LOC107723101 non-coding upstream 359785 18199250 ~ 18200429 (+)
G113942 LOC107587908,LOC100536175,LOC103025787 non-coding upstream 423225 18133886 ~ 18136989 (+)
LOC122359994 NA non-coding upstream 626737 17892970 ~ 17933477 (+)
G114104 NA non-coding downstream 311 18561280 ~ 18561911 (+)
LOC122360728 NA non-coding downstream 89804 18650773 ~ 18653605 (+)
G114172 NA non-coding downstream 102859 18663828 ~ 18664762 (+)
G114175 NA non-coding downstream 106876 18667845 ~ 18669187 (+)
G114132 NA non-coding downstream 205649 18766618 ~ 18888286 (+)
ensab ensab,LOC107587831,LOC107741750,LOC107663348,LOC107597988,LOC107732479,LOC107689847,LOC108441925,LOC108268136 other upstream 712804 17841802 ~ 17847410 (+)
mettl25b rrnad1,LOC107689858,LOC107549245,LOC107587879 other upstream 822732 17732604 ~ 17737482 (+)
acbd7 acbd7,LOC107549230,LOC107717797,LOC107681577,LOC108440763 other upstream 1153018 17400284 ~ 17407196 (+)
stx17 stx17,LOC107706149,LOC107723570,LOC107593691,LOC107657726 other upstream 1648333 16900668 ~ 16911881 (+)
sec61b sec61b,LOC107593687,LOC107723518,LOC107595994,LOC102796100 other upstream 1736231 16767060 ~ 16823983 (+)
G114131 NA other downstream 87576 18648545 ~ 18857430 (+)
LOC122360853 LOC107700173,LOC107717447,LOC107551678,LOC107723400,LOC107582047,LOC107671182 other downstream 114591 18675560 ~ 18680093 (+)
LOC122359904 psma2,si:rp71-45k5.4,LOC108440756,LOC103045926,LOC107686300,LOC107592434,LOC107714337,LOC107724313,LOC103023870,LOC108425697,LOC107653859,LOC107556413 other downstream 197336 18758305 ~ 18761771 (+)
LOC122360692 NA other downstream 247775 18808744 ~ 18821136 (+)
LOC122360132 NA other downstream 266285 18827254 ~ 18841584 (+)

Expression


Co-expression Network