G116057


Basic Information

Item Value
gene id G116057
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 25003262 ~ 25057168 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU171329
ttttttttttttttttttttttttttttCTTTCCATATCAAAGTTTATTGCTGACATGCATGTAGAGATTTGATGAAGTACAAAAATATGTCTTTTatacaaatttgtttttcatctctgtACAATtacccagttttttttttctttgacaccATTCTAACCGAGCAGCTTACGACATCAAACGTTCAGGCTTTTGACCAGtttcattgtgttttgttttacaccagatttatattttccagttttaataaaagatgcaaaaaaaggTAACAATTCTAAAGAGAGATCTCCCAAATTATGAAACATCTGCACAAAGTGgcctaaaaagaaaagaaaatctaagTTAAACTTAAATGTTCAGTATCTTCCCTTGCAATCTTTAAGTATTCATCATTTGCAAAACACCCACATCCACTCCAATTTCTGCTGCATCTTCTGGCACGTCTTGCTAATTAGAATCATGCACTAATTGCTTTGAAATTGTATAcagagctcaaaaaaaaaacaaaaaacgtacACTTCTCATGCTGCAGACAGAATTTTGGACGTCACGAAACTGTCTATGCAATGGAGACCGGGGGGTTTGCAGTCACTTGTGCAGGGGGGgcatattaaacatatttactaATTTCTTTGATCTAGGTTTTGGGTACAGACTACACAACCACATCAACAGCAGCCATATTGCAACTGTACAAATTTGCTATGATATAATGGCTTTTGTGAGAACTCTACGTGGACCTAGGATATAGCCTTGAGGCACTCCTTTTTGAATACAAGGGAAAGACTTTGATTTGCTCACAAAAAGTCCCTCTCCATCAAATCACGCATATTATCCACTACAATACTGCTTTACAACCAAATATATTCACATTGAGGTGGGAAAAACTAATGCTTTCGATGGTGGCTTGTGTGGAAAGATTGGTGcgattctttaaaataataatacccCGCACTGGGTTTTGCACTATTGATGCCTATCCGCCATTACGATGTCTTTCACACTGGCCAGAGTGCAGTATCATTCTATCTTGCAAGATAAACTCTACACCGATTCTACATGTCATGCTAATGTGCACGATAATTTAGTTTACTTAAAATAGAGCTATGCAAAGTCAGTCACCTAATTAGTGTAGCTTAATATACCGACAGGATTGTTGCAATAATTAttcaagaatataaaaaaaaaaaaaaaagagggaaagagacaataaaacaaaaccttcaCTGAAgatagaaggaaaaaaaaaaacgtgagaGATCACAGCAATGCTTTTGAGTGATACATGATCTCTACATTTACCATGGCAGatgaattaaaaacagcaaataaattaaaaggaaaactaAAAGGTACGGATATACTACCAGGCTGTACGTCTTCAAAAGAGGAAATCAAAGTGGAGATTAAAAGGACAAGCCAAGCTGCTAGTCATGAGCTCAGAGATCTACAGTACTGAATGACCTTTTCATCTAAATGACATGAGTGGAGCCAGACATAAAGGCATTGCAAACTAAGCCACAGGTCCACAGGTCGATGCAAGCCAACCGCCTAGTATACTAAGATATATTCTAGCATCAAAAGTACATATTCACTGCTCACGGTTGAGTTGAGAATCTGTTGATAATCTAAGGCAAGATATCCCACAGTTATGCTTTATACACATGGGCTAGCTTAAAACGGGACTGAAAAAAGTCGAATGACATTAAGAATCTGTTTCCTTGCAATATTCTCACACAAGAAACAGATGGAGAGGAGTGGGTTTCATGGCATTTCCTTCCTGATGATCGTGAAGTAGTTAACCATACGTGGAAATGAGCGGTAGGTAAgagaataagaaaaacaaaaagaaacaatccCCTAAGAAATGGGTTTCTTTGTATCACTGTGGCCAGAAACGTTCCCTAGCGGCCAATCCTCGATCCCTGAGCTGCAGCTGAAATCTGTGTGGGGAACAAAAGCACCGGAGATACAGGACATGGCAGAAGATGCACTTTGATGGCTTGGCATGCTATCAGAGGGCGAGCGCTCTAGACGGAGGGACACAAAAGGAAAGGAGGGCTTAAGGGCTGTGCTTACGGGGCTTATCTTGGCTTAGACTTCCGCATGACTGCCGGCTCAGCCGCCCTGCTTCCTGACAGTTTCATCCCATCACCAGCTGTCCCGTACCTCGTCTTTTTCCAAGCACAGTCCCGCAATGAGTCCCTGTGTGACACACAGCCGAATGCACAAAAGTACCACCTAGCTCAGCTCTCGAGAGTCCTCTGTAGTGGCACATCACATGATTAAAAGTACATTTCCGTTTGGTCGAATGCACGGGAAGTGGCGGCCTTGCACTTTCTGCTGCCTTCTGATTGGACGAAAGCAATAGGGGAGAATAACGTACCATATCATCCGGTTTGGATGACAAGTTATGCTTTTGGTTGTATGCATCCAGACACAGATGCTAGCTGCCAACAGAAACCCATTCAAATAGAGGAGGAGAAATACGTGCTGCTATGATTTCAGTAATATGAGGTTTTTAGCTTTCTAACTTGTAAAACTTAACATCTTcaatggaaataaaaagaataaccTTACTTAAAATGCTACCGTTTTAGTAAGAGAGGAGAGGGGGGAGCTTATTTAGATTGTAAGGAAAAACCAATCACTGGTTTTGACACAGAATAGTTACACAACCACAATGCTAATGCTCTTGAGCCTGTGCTTGTCTCCCCTCAACATAATGAGTCCTGCTTTCATAAGAACGGAGAGCGTTGTTAAAAACCGACTAAGAAAGGAGGAAATAgagagatagaaaaaaaaatggtaagaGGTAGATTTGCAGTCATAGATACAGATGGGAGAAGAACAGACAAACTGGTTGAGGGGAACAGAACAAAAGGGTTGATCATGTGATCCGAGGCGTTCCTGTAGAAAGTGCTGGGGGAGAGGCGGATGGAAAAAGGGTGGTTGTGTGTGATCTGCTACATGATTCTGTTGGGGTAttgctgaaaatgtgtgtgcgtgtgtatgtgtgtgtgtgtcagatttGGGCAAGGATTGGCATGGTGGAGGTGGTGGTCAGAGTCTCATCAGACCTGGTTTCAGAGTCTGTGTTCTGGGCCGATGAATGGAGCAACGGAGCGCTGAGCTGTTCCTTGGCCCATGTTTGCGTCTGCCAGACTCACGCtgcatgctcacacacacatacacatacactctcacacgcaAATGTACATAAAAGAGAGCGCCCAGTTCCGTGGCTTGCTCCACTCCTGGTGACCCCTGCTTGCGGACAGAATGACAGCGCTACTTTCGGAGGAAGCGCTGGGCCAGTATTGCGGCATCCAGAGGGCTTATGGGTTGAGCATCGTGGCCGAGGCGCCTCACCGGAGGCACATTACCGAAGTGCCTCTTGCTGAGGAAGTTTTTGGTCTCATGAATagtgtttttctcttctgcCAACAAAAGCTGTTGCCTCATGTAGTTCTCAAATTCGTACTGAGATGACTCCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU171329 True 3500 TUCP 0.42 2 25003262 25057168

Neighbor

gene id symbol gene type direction distance location
map7d1a map7d1a,LOC107705598,LOC107556093,LOC107700716 coding upstream 38026 24945236 ~ 24965236 (+)
si:ch211-1i11.3 LOC107705646,LOC107704978,LOC107588497,LOC107700717,LOC107556089 coding upstream 79320 24907377 ~ 24923942 (+)
cited4b cited4b,LOC107705696,LOC107704975,LOC107588500,LOC107755532 coding upstream 118047 24882873 ~ 24885215 (+)
rab42b rab42b,LOC107705715,LOC107588502,LOC107704972,LOC107755478,LOC107700723,LOC107566931 coding upstream 167636 24833517 ~ 24835626 (+)
si:dkey-34d22.1 si:dkey-34d22.1,LOC107755496,LOC107700721,LOC107704969,LOC107705703,LOC107566930,LOC107588520 coding upstream 175888 24814714 ~ 24827374 (+)
sh3bp5b sh3bp5b,LOC107705532,LOC107588490,LOC107755668,LOC107700710,LOC107704986,LOC107556100 coding downstream 36013 25093181 ~ 25106459 (+)
col6a4a LOC107704846,LOC107705786,LOC107588488 coding downstream 79768 25136936 ~ 25161646 (+)
decr1 decr1,LOC107704989,LOC107705494,LOC107756153,LOC107700707 coding downstream 115407 25172575 ~ 25177859 (+)
LOC122360523 rab5ab,LOC107688205,LOC107707637,LOC107716989,LOC100701272,LOC103038585 coding downstream 149128 25206296 ~ 25213787 (+)
efhb efhb,LOC107671426,LOC107688256,LOC107743149 coding downstream 243091 25300259 ~ 25312298 (+)
G116048 NA non-coding upstream 112700 24890275 ~ 24890562 (+)
G116043 NA non-coding upstream 116907 24885714 ~ 24886355 (+)
G116039 NA non-coding upstream 158132 24843422 ~ 24845130 (+)
G116029 NA non-coding upstream 166345 24835971 ~ 24836917 (+)
G115861 pkib,LOC107374466,LOC105417165 non-coding upstream 542943 24452231 ~ 24460319 (+)
G116072 NA non-coding downstream 10230 25067398 ~ 25070377 (+)
G116082 NA non-coding downstream 27854 25085022 ~ 25085365 (+)
G116101 NA non-coding downstream 235043 25292211 ~ 25323742 (+)
G116120 NA non-coding downstream 248593 25305761 ~ 25308931 (+)
G116136 NA non-coding downstream 644048 25701216 ~ 25701429 (+)
LOC122360598 NA other upstream 170644 24773819 ~ 24832618 (+)
cnr2 LOC107716825,LOC107587892,LOC107704869,LOC107700673,LOC107597120 other upstream 1180816 23815924 ~ 23822446 (+)
tstd3 si:dkey-165n16.1,LOC107700689,LOC107704863,LOC107716817,LOC107587896,LOC107711730 other upstream 1390869 23609448 ~ 23612393 (+)
LOC122360149 LOC107704935,LOC107716843,LOC107587775,LOC107552833,LOC107700676,LOC107711721 other upstream 1644483 23274989 ~ 23358779 (+)
G115449 NA other upstream 1748696 23251382 ~ 23254566 (+)
G116099 rab5a,LOC103388351,LOC105904716,LOC101157247,LOC108411561 other downstream 495695 25552863 ~ 25554807 (+)
G116141 usf2,LOC107688254,LOC107707624,LOC107671406,LOC107568863,LOC107552520 other downstream 661352 25718520 ~ 25778407 (+)
hmgn2 NA other downstream 1155564 26212732 ~ 26215779 (+)
G116445 ubr5 other downstream 1784212 26841380 ~ 26842025 (+)
G116459 LOC102223539,LOC107092448,LOC103472369,LOC102305030,LOC102207943,LOC100703061,LOC104937165 other downstream 1838270 26895438 ~ 27171468 (+)

Expression


Co-expression Network