foxj2 (LOC107549475,LOC107692570,LOC107724837,LOC107744299,LOC107672970)


Basic Information

Item Value
gene id foxj2
gene name LOC107549475,LOC107692570,LOC107724837,LOC107744299,LOC107672970
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 13498815 ~ 13506578 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261307.1
AGAAAAATCTGAATGGAAATTATTACCGCCTGGTGCTCCGCAGCTCTCTTATTTCAGCAGAGAAACAGGAACTTACTCACCAGGAGGAGAAACGCACCGACTTCTCAAATGTCAACCGGAGGGTGGAGTATGTGACGTTCGACGCAGGCAGATCGGGAgggggaaagagaaagaaaaggaagaactttttttttccgaCAGCTTTTTCTTCTCCCAAACAGAAATTTCATACAAAACGCGTTAACTTGGGCGCTTCGGGTGGCGAATGAACGCGGCGATAAACGCGAGACGAGCGAGGAGGAGGATAAACGAGCTTTCGCGGAGATCCCTCAGATGTCTGTGCGACAGATGACAGCGTTAAAACTCGACACAGCGTGAAGCCTGTGGCCTTTTGACAGAACGGAGATATCCCCTTCAGCATGACTTCTGAACTGGACTCTAGCTTGACCAGCATCGACTGGCTTCCTCAGCTGGGGATCAGCACTTTGAGATCAGGCAAAGAAAGAGTGGAGCGAAAAAAAGAACGAGGAAGAGAGAAGGACATCCCTCCCATACCTACACCGTCCCCTGGGTCTAACTCCAAAGTGAAACCCCCTCACAGCTACGCCACTCTCATAGCCATGGCAATCAGCTCTGCTCCTGAAATGAAGCTGAGTTTGAATGATATTTACACATGGATCAGCAATACGTTTCCTTATTACAGCAGAGCAGGAAGAGGATGGAAGAACTCAATTCGACACAATCTGTCCCTCAATAAATGTTTCCGAATTCCTCGACCACAGAGCGATCCTGGGAAGGGCTCATACTGGACGATGGATGTACCGCCTGACTCGGCTCAACCCAGGGGAGTTAAACGTGCTTATCCTAAAGAGGAGGAGGCTCCATTCTCAGAGGCTCAAGTGCCCGTCAGTCAAGCAGAGCCCCTCCAACCTCAACCAGACACCAAAAGCACGTTCTCTCCCCCTCCTTGCAAGcaacGTCCCAGCATTCCGGTACCTACATCTCTTCCTTCGAACCCTCATGCTGACCCCTCGCTACGATTCTCCTTCGCTGATTTGAACCTACCAGATCTGTACAATTCCTTCCAGTCCCTCTGTCGCTCTGTAAGAGACAGAGTCACCTCACAATcGGACATTACCAGTTTACTTGGACTAACTCACGACAGTACGCCTCTCCACACACCAACCCTGCCTCCTCTCTCCCCCTGCCCCTGTCCAAACCCTAACATGAACCAGTACACCAACCCTACTCTAAACCCAAATCTCAATACCAACGGCAACTTCAACCCAAACACACCCAGTACTAACTCCAGCTTTATCCACAACCTAAACCCAAACCAGAACTCTACCATTCATCCGAACGCCAACACTGAGCCCGACAAGCTGCTGCACAGTAATGcagTTCCTGCAGATTGGTTCAGTAACGCTGACTCTTTGAGAGAGAGTTTCAGAATTGCTAGTAGTCTGGACTGGGCTAACATTGATCTCACCAGTCACCCTGACCTGGTAGAGAGCATGCGGCAGGCCGAGCTCTGTGACTGGGCGTTGGATTCGACACTCTTCACCTCGCTCTGTGATTCACTCAACCGTTTCTTCACTCAGAAGGGTCTCATTGGCTCACCCTCTGGTGGGCCCTCCTCTTTTGGACAAATGGCCCCACCTCCTATGAATATGCCGCCCACTAATCCTCCCAGCCTGGCTAGTTTAACTCAACCCTCTCCACTCATCTACCCCTCTCAGCTCCCTCCTGGCACTGGTGAATCTCCCCTCCAAAGTCCCAGGAGAACCCTGACCCCTCACACCCAGAACCAGATGGCACAGAGATCGCCGATCCAGCAGCCCACCACAAGCCAGCCTCTGACTCCTAGCACACTTCAGACTCAACCACTGACCCCAACAGGACGTCCGCACTTGAAGAAAGTCAACAGCGAGGAAATCCAGGATGATTTCGACTGGGATTCTTTGATTGagtaattttgttttgcagATAAATACACAGCAAAGAAAACATACAATTATCGAGAAAAGGCATGACTCAAAAAGTAAATGAAGCCAACTCATTCATCTCGTTTCATTTACAAAAGCAGCACCGCTGTAACAATGTTCATCATTCAGCTGTTTGATTTCCTTATGGCACAATGGTGCTGCTATAGTCAACTGCATGTTGGAGAACAATAATAGCAGCACCAAATTGTGAGGTTAACCAAAATTtgcaatgcaaaatatttatcatGTTTGTTTCTAAACCGCTCCAGACCTTGAAGGTTGGGGTGGATCGATCCACGCCAGGCTGCCTTGTTATGTAAGTgtattacaatgtaaataacATTAGCATTTCCAAAGCCTTAGCCAGCTGACAATGGCTCAGTTTTTGCTGAATGTTGATAAAGGCTTTAGTCAATTTAATAGCTGTTGGAAGAATTGTTTTCGGAAGAAATGATCTTAAATTGCACTTTTTCAACAAATTGCATGTACACTAACAATTTCTGGGagaataaatgcagtttaacaGTACACTGAGGTATATTATGGCAATATATATGGGTGTATTTTGACTGAAACCAATTATGACAtatattgctttatattttgtCACATAGCAAATCCCCTTAGGGTACAATTGTcttatcaaaaacaaaataaaaagaatggtttaatgtttgtcattttaattgccGTTTAAAAGCAAACCAatgccaaagaaaaaaaaaagcgtagaccttttttttgtgattttgtttttatttcttaaagttctttgattttttttttcctccattttatatttaaatgtgaatgtcAACACCACACGATTTTTGACCATAGCCAATATTAGAGAAATGTCTCtaaaattttcatatatataaaataattcattgaaagtaaataaagaataaCAGCATGGATCATGTCATTCAGTCCCCAAATTTTATGATTTCCCATAATCATTCaggtaattttctttttcagtttcaatAGCATTAACACTTTCCCACTTGTGTAAATgttcaaggaaaaaaaaaatgtgctgaagTGAAATGCAAAGACAGGCTGATTCCACGTGAACAGGTGTCGAATTAATGCTTTGATTCTTACAactgtcaaaaaacaaaaaaaaaagtgtgaaaagaaGGACCCTTATAACAAGTTAAGAGTGCTGAAAGTGAGACTATGCTGATAAAAACCCCCATCAGAAGCACAGGACCGAGTGAAAACAATGGACACATCATATAagctcactctctcactcactcacacacacacacacacacacacacacacacactcaccatcTCTTCATGTGTACCACTTAACATGGACTGAAATTTTGCAGGTGGTCAACGGAGACCAATCAGGCATCTCTTTGAATGGCAATTTCCAGTGCGATTTTCCTTGGTTTAATCGATCCCAGGAGTCAGAGACATacgattaaaataaattacacaagattacacataaattaaattaaaagtaatacatctatcgaatgattttttttttttactagagtTGTGAATAAAACAGCTGACGACTTCTCAGTCTGTTCAGGGCGAGCCCATCACAGTCATACTTCATGCACTCTTTCATCAGAGGGTCGACGGCTCAATGAAAGGGGGAGAAAGGGGTGTATGATTGAGTTCATTAGTGGCTTGTTTTCCTCCTCCCTTTTCTTCATGTTTCTGAACAATAACAATCATcctaataatataacaatattaacaGCCTGCATTCATTGAATGAACCCACCAATCGTCCatgtctgtcaaaaaaaaaaaaaaaaaaaaaaactaataggGAAATAAATAGA

Function

NR:

description
forkhead box protein J2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261307.1 True 3807 mRNA 0.43 11 13498815 13506578

Neighbor

gene id symbol gene type direction distance location
isoc2 isoc2 coding upstream 685 13494746 ~ 13498130 (+)
cacng8b cacng8b,LOC107598392,LOC107724881,LOC107692566,LOC107549473,LOC105894622,LOC105934996 coding upstream 27127 13449986 ~ 13471688 (+)
cacng7b cacng7b,LOC107549472,LOC107598394,LOC107672975,LOC107724890,LOC108437486,LOC108259712 coding upstream 51951 13435399 ~ 13446864 (+)
LOC122360375 prkcg,LOC107672987,LOC107598406,LOC107724902,LOC107549469,LOC100149482,LOC108437450,LOC107744308,LOC108276343,LOC107549470,LOC107692563,LOC107672989,LOC108437484,LOC102194125,LOC102306909,LOC100699493 coding upstream 65274 13328566 ~ 13433541 (+)
si:dkeyp-69b9.3 LOC107750016,LOC107737921,LOC107549467,LOC107673045,LOC107692576 coding upstream 207651 13275732 ~ 13291164 (+)
sbk3 sbk3,LOC107692583,LOC107724984,LOC107549477,LOC107598393,LOC107672974,LOC107744295 coding downstream 13139 13519717 ~ 13525869 (+)
ephb6 ephb6,LOC107724759,LOC107672963,LOC107744289,LOC107700205,LOC108432347,LOC108270687,LOC106576842,LOC107549482 coding downstream 113897 13620475 ~ 13665213 (+)
trpv6 LOC107549483,LOC107700202,LOC107744287,LOC107672966,LOC107598386,LOC107724748 coding downstream 161456 13668034 ~ 13673621 (+)
leng8 leng8,LOC107744285,LOC107672965,LOC107724921,LOC107549486,LOC107700201 coding downstream 176380 13682958 ~ 13693942 (+)
LOC122361372 NA coding downstream 189190 13695768 ~ 13695823 (+)
G112006 NA non-coding upstream 190052 13304582 ~ 13308763 (+)
G112011 NA non-coding upstream 228622 13269878 ~ 13270193 (+)
G111993 NA non-coding upstream 337867 13158802 ~ 13160948 (+)
G111998 NA non-coding upstream 352394 13141213 ~ 13146421 (+)
G111987 LOC107692542,LOC107596619 non-coding upstream 391661 13106286 ~ 13107154 (+)
G112046 NA non-coding downstream 30207 13536785 ~ 13543333 (+)
LOC122361042 LOC107724977,LOC107692585,LOC107672983,LOC107549448,LOC107598400,LOC107744312 non-coding downstream 40463 13547041 ~ 13552978 (+)
G112066 NA non-coding downstream 170442 13677020 ~ 13679008 (+)
G112065 NA non-coding downstream 187639 13694217 ~ 13701775 (+)
G112078 NA non-coding downstream 209883 13716461 ~ 13789090 (+)
nbeal2 nbeal2,LOC107596634,LOC107752840,LOC107685597,LOC107743212,LOC107673027,LOC107581539 other upstream 942457 12500071 ~ 12556358 (+)
LOC122359987 LOC107685557 other upstream 1022307 12474517 ~ 12476508 (+)
LOC122360650 LOC107685555,LOC107743206,LOC107596715 other upstream 1108030 12379703 ~ 12390785 (+)
LOC122360824 dnah11,dnah9,LOC107596639,LOC107685550,LOC107743202,LOC107740597,LOC107677540 other upstream 1360969 12106111 ~ 12137846 (+)
LOC122359964 pde11al,LOC107743218,LOC107684552,LOC103364058,LOC107685581,LOC107596730,LOC107550795,LOC107744711,LOC108441531 other upstream 1956576 11525296 ~ 11542239 (+)
mfap5 mfap5,LOC107692584,LOC107549447,LOC107672984,LOC107598402,LOC107744296,LOC107724932 other downstream 24591 13531169 ~ 13544412 (+)
LOC122360452 cox6b2,LOC107744291,LOC107598404,LOC107692571,LOC107549480,LOC108432349,LOC108270780 other downstream 100029 13606607 ~ 13609407 (+)
slc2a3b LOC107692573,LOC107724776,LOC107672969,LOC107744290,LOC107598389 other downstream 104671 13611249 ~ 13619347 (+)
zgc:158701 LOC107598451,LOC107671172,LOC107755974 other downstream 358043 13864621 ~ 13867229 (+)
LOC122360840 LOC107582135 other downstream 1772466 15279044 ~ 15282980 (+)

Expression


Co-expression Network