Gene
RNA
| Item | Value |
|---|---|
| gene id | adgrb1a |
| gene name | adgrb1,adgrb1a,LOC107697227,LOC107756055 |
| gene type | coding |
| species | tiger barb (Puntius tetrazona) |
| category of species | ornamental fish |
| Item | Value |
|---|---|
| chromosome id | NC_056714.1 |
| NCBI id | CM032083.1 |
| chromosome length | 28146790 |
| location | 22553763 ~ 22639975 (+) |
| genome version | ASM1883169v1_2021_tiger_barb_Genome |
| symbol | description |
|---|---|
| adgrb1a | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in adenylate cyclase-activating G protein-coupled receptor signaling pathway and engulfment of apoptotic cell. Predicted to act upstream of or within G protein-coupled receptor signaling pathway; cell surface receptor signaling pathway; and negative regulation of angiogenesis. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in dendrite and postsynaptic density. Predicted to be integral component of plasma membrane. Is expressed in muscle; nervous system; and testis. Human ortholog(s) of this gene implicated in glioblastoma. Orthologous to human ADGRB1 (adhesion G protein-coupled receptor B1). |
| adgrb1 | Enables G protein-coupled receptor activity. Involved in several processes, including engulfment of apoptotic cell; negative regulation of endothelial cell migration; and positive regulation of reactive oxygen species biosynthetic process. Located in extracellular space; perinuclear region of cytoplasm; and plasma membrane. Implicated in glioblastoma. Biomarker of carcinoma (multiple); gastrointestinal system cancer (multiple); invasive ductal carcinoma; and malignant astrocytoma (multiple). |
| description |
|---|
| PREDICTED: brain-specific angiogenesis inhibitor 1 |
| id | description |
|---|---|
| K04596 | ADGRB1, BAI1; adhesion G protein-coupled receptor B1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_043261393.1 | True | 7036 | mRNA | 0.51 | 33 | 22553763 | 22639975 |
| XM_043261395.1 | False | 7020 | mRNA | 0.51 | 33 | 22553764 | 22639975 |
| XM_043261396.1 | False | 7000 | mRNA | 0.51 | 32 | 22553763 | 22639975 |
| XM_043261397.1 | False | 6975 | mRNA | 0.51 | 32 | 22553764 | 22639975 |
| XM_043261398.1 | False | 6960 | mRNA | 0.51 | 32 | 22553764 | 22639975 |
| XM_043261399.1 | False | 6960 | mRNA | 0.51 | 32 | 22553764 | 22639975 |
| XM_043261400.1 | False | 6937 | mRNA | 0.51 | 32 | 22553763 | 22639975 |
| XM_043261401.1 | False | 6930 | mRNA | 0.51 | 32 | 22553764 | 22639975 |
| XM_043261402.1 | False | 6900 | mRNA | 0.51 | 31 | 22553764 | 22639975 |
| XM_043261403.1 | False | 6876 | mRNA | 0.51 | 31 | 22553764 | 22639975 |
| XM_043261404.1 | False | 6867 | mRNA | 0.51 | 32 | 22553764 | 22639975 |
| XM_043261405.1 | False | 6861 | mRNA | 0.51 | 31 | 22553764 | 22639975 |
| XM_043261406.1 | False | 6855 | mRNA | 0.51 | 31 | 22553764 | 22639975 |
| XM_043261407.1 | False | 6852 | mRNA | 0.51 | 32 | 22553764 | 22639975 |
| XM_043261408.1 | False | 6792 | mRNA | 0.51 | 31 | 22553764 | 22639975 |
| XM_043261409.1 | False | 6786 | mRNA | 0.51 | 30 | 22553764 | 22639975 |
| XM_043261411.1 | False | 6777 | mRNA | 0.51 | 31 | 22553764 | 22639975 |
| XM_043261412.1 | False | 6672 | mRNA | 0.51 | 30 | 22553764 | 22639975 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| rspo2 | rspo2,LOC107679648,LOC107705839,LOC107600624,LOC107755916,LOC107551185 | coding | upstream | 240738 | 22261301 ~ 22313025 (+) |
| eif3ea | eif3ea,LOC107755923,LOC107551184,LOC107679649,LOC107705216,LOC107666832,LOC108434212 | coding | upstream | 294997 | 22220874 ~ 22258766 (+) |
| LOC122360094 | tmem74,LOC107705834,LOC107666858,LOC107713801,LOC107679640,LOC107551181,LOC107579295 | coding | upstream | 413936 | 22136568 ~ 22139827 (+) |
| gdf6a | gdf6a,LOC107705204,LOC107600621,LOC107666829,LOC107551190,LOC107679643,LOC107713806 | coding | upstream | 543604 | 22004235 ~ 22010159 (+) |
| ebag9 | ebag9,LOC107666870,LOC107705161,LOC107600620,LOC107679646,LOC107713822,LOC107551191 | coding | upstream | 563847 | 21983890 ~ 21989916 (+) |
| si:ch211-198c19.1 | si:ch211-198c19.1 | coding | downstream | 95904 | 22735879 ~ 22737796 (+) |
| cep162 | cep162,LOC107681424 | coding | downstream | 104909 | 22744884 ~ 22761065 (+) |
| pogzb | pogzb | coding | downstream | 177088 | 22817063 ~ 22830341 (+) |
| selenbp1 | selenbp1,LOC107588475,LOC107556087 | coding | downstream | 193753 | 22833728 ~ 22838634 (+) |
| pi4kb | pi4kb,LOC107556110,LOC107681428,LOC107588477 | coding | downstream | 199447 | 22839422 ~ 22855839 (+) |
| G115288 | NA | non-coding | upstream | 23501 | 22527157 ~ 22530262 (+) |
| G115200 | NA | non-coding | upstream | 552146 | 21997010 ~ 22001617 (+) |
| G115157 | NA | non-coding | upstream | 724232 | 21828216 ~ 21829531 (+) |
| G115134 | NA | non-coding | upstream | 859219 | 21693494 ~ 21694544 (+) |
| G115074 | NA | non-coding | upstream | 1162601 | 21390781 ~ 21391162 (+) |
| G115342 | NA | non-coding | downstream | 127526 | 22767501 ~ 22768460 (+) |
| G115401 | NA | non-coding | downstream | 343086 | 22983061 ~ 22983700 (+) |
| LOC122359996 | NA | non-coding | downstream | 359474 | 22999449 ~ 23003110 (+) |
| G115384 | NA | non-coding | downstream | 368629 | 23008604 ~ 23009835 (+) |
| G115371 | NA | non-coding | downstream | 412445 | 23052420 ~ 23077876 (+) |
| G115193 | NA | other | upstream | 574395 | 21977117 ~ 21979368 (+) |
| stt3b | stt3b,LOC107668300,LOC107666808,LOC108434203,LOC107713794 | other | upstream | 632232 | 21883909 ~ 21921531 (+) |
| tgfbr2b | tgfbr2,LOC107730143,LOC107600517,LOC107551196,LOC107713826 | other | upstream | 680791 | 21849989 ~ 21872972 (+) |
| siglec15l | NA | other | upstream | 1783371 | 20767278 ~ 20770392 (+) |
| slc4a7 | slc4a7,LOC107666816,LOC107686077 | other | upstream | 2249079 | 20267541 ~ 20304684 (+) |
| LOC122359863 | aldh5a1,LOC107704994,LOC107705391,LOC107700704,LOC107588482,LOC107755744,LOC107556105 | other | downstream | 269560 | 22909535 ~ 22915477 (+) |
| LOC122360067 | calb1,LOC107704882,LOC107588486,LOC107556079,LOC107700706,LOC106580458 | other | downstream | 324594 | 22964569 ~ 22975774 (+) |
| LOC122360203 | LOC107704907,LOC107714612,LOC107587796 | other | downstream | 470308 | 23110283 ~ 23116815 (+) |
| wnt4b | wnt4b,LOC107704912,LOC107552850,LOC107587793,LOC107671942,LOC107724774,LOC108443656 | other | downstream | 524591 | 23164566 ~ 23169677 (+) |
| rps9 | rps9,LOC107587787 | other | downstream | 582075 | 23222050 ~ 23223928 (+) |
