LOC122360694


Basic Information

Item Value
gene id LOC122360694
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 20751773 ~ 20755366 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261509.1
GAACAGTGCTGACCAAGACATCAGTGCTAGGACACTGAGCAAGTTAAAGCCATAACCATGCTTGTTTTCCTGCTGATCGCATCAATGTTTCGCCAAGGTCTTGCAGTAGTGAGCTACGGAGACAACTTTATCACTGTCTTTCCCGAGAACATTGGTTTCTTTTATCCATCTCCTACCACGAACCGTCTAAGAGTCACGACCCTTCATGACAACACCAACATCAAAGCCTTCTACAATAACGTGCTGAAAATTTATCAAATTCCAATGTCAGGGCAAACCTTAAGTATTGTGTTTCCAAAGTCGGCTGAAGTAAATCAACTAGGCCCCTCGACTTTATCTGTCAGAATTACCAGTGACAAAGACATCACAGTGGTTTCTATAAGTTCCCAGATGGGCAGCACTCAGACCTATGTCGTCCAGCCAACTGTAAATCTTGGCACAAACTATTTGATCCCTTTGCTGGATTACCCAGACTATCTTCAATCTTTCAACCTACCTACGCTTGTCAGTACAACCATAAGATACAGCTCATACAAGTTACTCATTATCAACGCAGTGGACAGTCAAAACAGCGTCACTATAGTCAAGAAAACGCCAGGTGCTGGCGACGAGACGTTCAGTATCGATCCCTACCAGCTGGTCCAGCTTCAGACCAACGGTTCTATTGTGAGGGTCAAATCGAGCAAAGAAGTCGCTGTGATATTGACTCACCCCTGTGTAGAGACCGAGAACTGTAATTGTAACATGGTAATGAATCAGATTCTTCCCACGGAGTTTTACGGTCGGAGATTCATCTTGCCTTCCATCTTCAACGTGGCCGAGACCAAGTTACTCATGCTGTCAGAAAACGCGTCCGCGCTATTTTACGCTGGTAACCAATTACAGGTTTCTGCCTCGACGCTTCTGCCATTTACAGACCTGCAGAAATCCCAGCTGCTTAATTCTACGGGGCCAGCGTCCCTCAGACTTTTCAGTCCGGGCCTCATTGTGGAGCTGATCCCAGAAAACAGGTTCTCTGCTTGCTACCTGCTGCAGCTTTCTACCGAAAATGGCAAGGCTTTGGTGATCGCTGAAACAAACAGTAAAGATGATGTGCACACAAACAGAGGTTTGCTCTCGGCATCTGACTGGACCGAAGTCGCTGGCACAATCTACTCTTCGGTTATTGTAACTATACCTGATAAATTTGCCACAATCTGGCATCCAACATCAAGGATTGCCGTTTATATGCTGGAATATATATCTGCAAAAGTAATATTCGCAAGTCCGGCTATACCAATCAATACAAAACCAGATCTTCATGGCTGTGTGTTGATTCCGGGAGCATTTGCGATTGGAAAAGACCCTCTGAATTGGAAGAAGTCTCGCGAGTATTGCATGAATAATGGAAATCAGTTTGCCTGTCCTATAACTGAAGCTGTCCAAAAAGACATGGCTGATAACCTGACCAAGGAGGATGGGGACGGCTGGATCGGTCTCCGTCGCAGTTTGCTAACTACAGACTGGTATTGGCAGGAGGAGTATGATACCCCAATCTCTGTCAATTACCTCCACTGGGACTACAAGCAACCGCTGGACCTTTTGAAGGGCTTTTGCACTTCAGTGTCCCTTGAccctaaaaataatttcaaatggCGAAGTGCACGCTGCTGTGATAAAAAGAAGCCTGTCTGCTACAAAAGGCCAGCGTATCTCAATCCCTTAGGCACTATTAATAGTATCAATTTTGTTTAGTGCTCTTTGGTAATGCTATCCTTTAGGTTcgttatttcatatttgtatcaCCTCCTGCATATCTgagctgtatttttaatgaatgtaatgtCTTCATGTGTTTTAGATCATAGTAAATTACACTAATGGCATTTTCAAATTATGTCAAGCAGTTAATATCATAAATTTATCTATAGACGCTTTAAACATCAAACAGTCGCATCCTGaattaaacagcttttttattaGCTTATAGACAACAACTGAAATGGTAGCCGAAATTACTGTATGAATGCCAcatcaacaaaatatatatcactaaaaatcactttaaagtgttttatataAGAAATCAATACGATATAAAGCGTGCTTTATttagtgctttattttattttacatgcttcattttagtattttttttccaccaccGACTACATCTACCGGTTTTATGCTCACAATGGAATATAGTGACtgattaaataatgttacataGCATACATATCTTTAATCAAAGCATGTAGTGACAATTTATATGTACATCAAATCCACAGGAACATCGAATAAcgacattatttacaaaaaggaggctattacattgaaaaataataacaccGGCACAGTTCTAGAGACCATCTCACGCCTAGGGACCAATgtattctttttacttttttaaatataaaagcagtGGTGTGTTCACAAATCTGTTTTCCAGACACACAATTTGACAAATGAACTGACTaagactaaaattaaaactagcATAGTCCTTTAGTTCAGACAGCATCTCAAAAGGGCAGcctattaaaatatgaatagaaCCTAACATTATTGGCTGAATTTAGCTTTCAGTTAACTACTAATTCTTTGAGTCTCGTCTGTCAGTCGTGAAAGCTCTGAAAAGTTCGTAATTATGAACGCTTGGTGgcgctgtgtgttttttttttttttttttgacgatCAGATCATTTTTAAGATCAGTGGTTAGTTACAATAGCTCTTTTAAAAGGAGcagcaaatgtataaaaataaaagaaag

Function

GO:

id name namespace
GO:0008289 lipid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261509.1 True 2752 mRNA 0.40 4 20751773 20755366

Neighbor

gene id symbol gene type direction distance location
LOC122360859 LOC107668277,LOC107592573,LOC107713820 coding upstream 458 20747331 ~ 20751315 (+)
LOC122360262 NA coding upstream 4794 20741818 ~ 20746979 (+)
atp2c1 atp2c1,LOC107666823,LOC107592020,LOC107600500,LOC107668304 coding upstream 14613 20707026 ~ 20737160 (+)
cep85 LOC107717359,LOC107600497,LOC107666796 coding upstream 51924 20687866 ~ 20699849 (+)
si:dkey-199f5.8 si:dkey-199f5.8,LOC107717362,LOC107666799,LOC107713844,LOC107592109,LOC107668306,LOC106605235 coding upstream 71572 20661662 ~ 20680201 (+)
rpp25l rpp25l,LOC107666877,LOC107600503,LOC107717368,LOC107713839,LOC107592013,LOC107668321 coding downstream 1629 20756995 ~ 20759232 (+)
LOC122361050 LOC107717367,LOC107666876 coding downstream 4002 20759368 ~ 20764347 (+)
cmtm7 cmtm7,LOC107666776,LOC107717357,LOC107668286,LOC107600545,LOC107592881,LOC107713818 coding downstream 15098 20770464 ~ 20774378 (+)
cmtm6 LOC107717369,LOC107600546,LOC107666873,LOC107668282,LOC107713799 coding downstream 22714 20778080 ~ 20784441 (+)
ptpn23a ptpn23a,ptpn23,LOC107666802,LOC107717372,LOC107668297 coding downstream 351721 21107087 ~ 21117690 (+)
G114826 NA non-coding upstream 113133 20637446 ~ 20638640 (+)
G114813 NA non-coding upstream 164946 20586060 ~ 20586827 (+)
LOC122360972 NA non-coding upstream 329584 20414210 ~ 20422189 (+)
G114707 NA non-coding upstream 337884 20413557 ~ 20413889 (+)
LOC122359979 NA non-coding upstream 509229 20234998 ~ 20242544 (+)
LOC122360417 NA non-coding downstream 173336 20928702 ~ 20929441 (+)
G114978 NA non-coding downstream 362783 21118149 ~ 21120532 (+)
LOC122360615 scap,LOC107666822,LOC107600505,LOC107668298,LOC107591983,LOC107717374,LOC107713836 non-coding downstream 373762 21129128 ~ 21132105 (+)
trnae-cuc_37 NA non-coding downstream 383515 21138881 ~ 21138952 (+)
G114983 NA non-coding downstream 385676 21141042 ~ 21142030 (+)
slc4a7 slc4a7,LOC107666816,LOC107686077 other upstream 447089 20267541 ~ 20304684 (+)
hjv hfe2,LOC107719159,LOC107666758,LOC107714319,LOC107592274 other upstream 524696 20219644 ~ 20227077 (+)
LOC122360533 dcstamp,LOC107556953,LOC107592504 other upstream 1103967 19643829 ~ 19647806 (+)
G114382 NA other upstream 1423010 19327104 ~ 19328763 (+)
fxyd3 fxyd1,plm,LOC107592153,LOC107728489,LOC107592449,LOC107665652,LOC105891849 other upstream 1458892 19283761 ~ 19292881 (+)
siglec15l NA other downstream 11912 20767278 ~ 20770392 (+)
tgfbr2b tgfbr2,LOC107730143,LOC107600517,LOC107551196,LOC107713826 other downstream 1094623 21849989 ~ 21872972 (+)
stt3b stt3b,LOC107668300,LOC107666808,LOC108434203,LOC107713794 other downstream 1128543 21883909 ~ 21921531 (+)
G115193 NA other downstream 1221751 21977117 ~ 21979368 (+)
LOC122359863 aldh5a1,LOC107704994,LOC107705391,LOC107700704,LOC107588482,LOC107755744,LOC107556105 other downstream 2154169 22909535 ~ 22915477 (+)

Expression


Co-expression Network