LOC122361050 (LOC107717367,LOC107666876)


Basic Information

Item Value
gene id LOC122361050
gene name LOC107717367,LOC107666876
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 20759368 ~ 20764347 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043261990.1
TGAATACCAAATATGTCTGTGCAGGAAATACACAAATTTGATCATGAAGTGCTGTGACTGAATGCCAGTGTTTTTAAAAGGCGCTGctcagaaaatgttttattaggggttgtttttttttttagttcaagtGAAAAACATCTTATTTGTTCAGATTTTAAGCATATCATCAGCAGCTGATAAATTAAGTCAAagctaaaaaattaatttcatgttttCCCAGCAAAGACTTGGTTGCAGTAAGTACAAAGAATGCTTTAGAGAAATGAGGAACTTTAAGTTATATGTTAGTTAAGAAATTTCTGTTTGGTAAAACttccattatatttaaaaaaaaagttaaatataatgGAAGGTTGTGTGTGATGTgtacataaaaacagttataaaaTTGTAACCTTTGTTTTGGAGCagaattattttgtgtataaagCCTTCTGTGAAGGTGTTGGTTAATTTCCACATCTGTAATATGAAACTTGTTGATCTTAAGGCACAAATGTTTCTGGAATCTTATGCAAAACCACAGGgggagaagagagaagagattTTGAATGTCAAATGTTCTTTTACCAAATGAACAGAGAATGCACAGCTTTTTCTGTTCAGATAGAGGAAGAGCGCCGGCCACGTTAAGctTCACACAAGGGGGAGCAGCATATGCAAAACGCAGTCATGTTGGCTGTTCTGGTGACCATTTTGATGTTTAGTCAAGGTCTCTCCTTGGACAATTGTGGGACGAGTTTCATCACGGCTTTCCCTGAGAACATTGCTGTTTATTATCGAAAGACCTATAACCTCTTCAAAATCGCCACCCTTCACCCAGACACTACGATCAATGTCACCTATATGGCTAACAACAACATCACCACCAACTCAAGCCTCGACAAAGGAATCGTTTGGACGTTGAATTTGACAAAGCAGGTTGAAGAATCCCTGTTTGTGTCTTCTAATAAGACGTTTCGAATCACcagcgataaaaacatcacagtgctTTCTGTGAGTGGATGGGAGGGGAGATTCCAGTCTCACGTTGTCCAGCCTGAACAAAACCTGGGAAATGTGTATCAGGTTCCCTCTCTGAATTACACCGCGATAGCCACGTCCCTTAACCTCGTGATGACATCAGATGTCAGATTCCTGCCTTTTAGGCTGATGATCATCAATGCAGTGAACAAGACCAACAGTGTCACCATAAAACGGGTGGACGAAAAAGGTCAGACCCAAGAAGATGCAATAATGCTCTATCCTTTCAATCTTTATCAGATTCAGATTGATTTGTCGGTGAGAGCAATCAAAGCAGAGCAGAAAGTGGCTGTGGTTCTGACCCATCCATGCTTTGACAGCAAAAACTGTTCATGCAACATGATTCTGAACCAGCTCCAACCCTATGAGCTGAACAAAGCCAATGACCAATTCCTTGTGCCCTCCATCTTCAGCGCCAGACAGCTACTTGTGACAACAAATCAACCCTTCAGAGCCTTTACTCCTACTACTAGTGTTTGGGTGCAGAattcttcagacattttgccgAATTTTAAGAACAACATCTCATTTATTAATACCAGCATCCAGATTTCCCTCAGATTAATCAGTCCCGGACTTATTCTAGACCTCATTCCGATAAGCAAGTTCTCTGGCTGCTATCTTGTGAATTTTAATTCCTTGTCCAGTGGTGCCTTGGTGATTGTAAATACGTCCAGCACTGATGCTGTGAGAATGAATGATCAACCTTTGCCTCAACAGATAAAATGGAACGTATTGAATGGAACAGATTACTCTTGGGCTCTAGTGGAGGGACAAAGGATAAGCACAATCTGGCATCCTTCTGCAAGGATTGGTGTATATATGATAGAACGCTTGGAGTTTAACAATACCTATGGAAGTGCGGCAACCGTTATAAGTATGGATCCAGATAATGGCGGCTGTCTGGTGACTCCAGAGATGTTTGTGCTTGGTGAAGATGAGTTGAGCTGGTTCAATTCCCGCTTGTACTGCATGGAAAATGCTGATCTGTTTGCCAGGCTCAACAACGAAAGCAGCCAGAATAAGATGGCCTTAAACATGACACTCCTAGAACCCACGGAGGGCTGGATCAGTCTGCGCCGGAGCTTGTACACAACAGACTGGTACTGGAAAAACGAGGACACTTTCGCACCCGACGTGGACTTTACTTACTGGGGGACAGGACAGCCTGAAAAACCGGAGAAAGGCTTGTGTGCTTCGGTTTCTCTGGATCCTAACAAGAAATACAAGTGGAAGAGTTCACGCTGCTGTACTAAAAAGAAGCCTGTTTGCTACAAAAGACCAAAGTATTTCACTTCATGAGATCCTTTGTAAACAGCAGATGTCTTAATTACAAGACATGGTTTTCCATATGCTCAACATACACCTGTCTATATATAGTGCAGCCCCTATATTAGACTAGATTGATCAAATGTTATGTGGTGGATAATGACATAGATCTAGCAAAAATAGTATCGGTCAAAAAATACTTGTATTGCAAACTTTTTAGGTTGaatataactaaattaaatatgagcTTGTAAGTTGAGATGTATTTTGAGCTGTATGCAGACTAAGATTTATTAAAGAATGTTA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107717367

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043261990.1 True 2601 mRNA 0.40 4 20759368 20764347

Neighbor

gene id symbol gene type direction distance location
rpp25l rpp25l,LOC107666877,LOC107600503,LOC107717368,LOC107713839,LOC107592013,LOC107668321 coding upstream 136 20756995 ~ 20759232 (+)
LOC122360694 NA coding upstream 4002 20751773 ~ 20755366 (+)
LOC122360859 LOC107668277,LOC107592573,LOC107713820 coding upstream 8053 20747331 ~ 20751315 (+)
LOC122360262 NA coding upstream 12389 20741818 ~ 20746979 (+)
atp2c1 atp2c1,LOC107666823,LOC107592020,LOC107600500,LOC107668304 coding upstream 22208 20707026 ~ 20737160 (+)
cmtm7 cmtm7,LOC107666776,LOC107717357,LOC107668286,LOC107600545,LOC107592881,LOC107713818 coding downstream 6117 20770464 ~ 20774378 (+)
cmtm6 LOC107717369,LOC107600546,LOC107666873,LOC107668282,LOC107713799 coding downstream 13733 20778080 ~ 20784441 (+)
ptpn23a ptpn23a,ptpn23,LOC107666802,LOC107717372,LOC107668297 coding downstream 342740 21107087 ~ 21117690 (+)
kcnv1 kcnv1,si:dkey-201i6.2,LOC107717377,LOC107666889,LOC107668317,LOC107713815 coding downstream 383410 21147757 ~ 21157049 (+)
si:dkey-22o22.2 si:dkey-22o22.2,LOC107666790,LOC107717379,LOC107668308,LOC107592533,LOC107713796,LOC107600533,LOC108437325,LOC108272818 coding downstream 446505 21210852 ~ 21314454 (+)
G114826 NA non-coding upstream 120728 20637446 ~ 20638640 (+)
G114813 NA non-coding upstream 172541 20586060 ~ 20586827 (+)
LOC122360972 NA non-coding upstream 337179 20414210 ~ 20422189 (+)
G114707 NA non-coding upstream 345479 20413557 ~ 20413889 (+)
LOC122359979 NA non-coding upstream 516824 20234998 ~ 20242544 (+)
LOC122360417 NA non-coding downstream 164355 20928702 ~ 20929441 (+)
G114978 NA non-coding downstream 353802 21118149 ~ 21120532 (+)
LOC122360615 scap,LOC107666822,LOC107600505,LOC107668298,LOC107591983,LOC107717374,LOC107713836 non-coding downstream 364781 21129128 ~ 21132105 (+)
trnae-cuc_37 NA non-coding downstream 374534 21138881 ~ 21138952 (+)
G114983 NA non-coding downstream 376695 21141042 ~ 21142030 (+)
slc4a7 slc4a7,LOC107666816,LOC107686077 other upstream 454684 20267541 ~ 20304684 (+)
hjv hfe2,LOC107719159,LOC107666758,LOC107714319,LOC107592274 other upstream 532291 20219644 ~ 20227077 (+)
LOC122360533 dcstamp,LOC107556953,LOC107592504 other upstream 1111562 19643829 ~ 19647806 (+)
G114382 NA other upstream 1430605 19327104 ~ 19328763 (+)
fxyd3 fxyd1,plm,LOC107592153,LOC107728489,LOC107592449,LOC107665652,LOC105891849 other upstream 1466487 19283761 ~ 19292881 (+)
siglec15l NA other downstream 2931 20767278 ~ 20770392 (+)
tgfbr2b tgfbr2,LOC107730143,LOC107600517,LOC107551196,LOC107713826 other downstream 1085642 21849989 ~ 21872972 (+)
stt3b stt3b,LOC107668300,LOC107666808,LOC108434203,LOC107713794 other downstream 1119562 21883909 ~ 21921531 (+)
G115193 NA other downstream 1212770 21977117 ~ 21979368 (+)
LOC122359863 aldh5a1,LOC107704994,LOC107705391,LOC107700704,LOC107588482,LOC107755744,LOC107556105 other downstream 2145188 22909535 ~ 22915477 (+)

Expression


Co-expression Network