trnat-ugu_48


Basic Information

Item Value
gene id trnat-ugu_48
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 16693577 ~ 16693649 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>unassigned_transcript_2158
GGCTTCATAGCTCAGTGGTTAGAGCACTGGTCTTGTAAACCAGGGGTCGCGAGTTCGATCCTCGCTGAGGCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
unassigned_transcript_2158 True 73 tRNA 0.56 1 16693577 16693649

Neighbor

gene id symbol gene type direction distance location
cdh17 LOC107706528,LOC107687825,LOC107595837,LOC107657630,LOC107723411,LOC107593711 coding upstream 11635 16672486 ~ 16681942 (+)
gem gem,LOC107706541,LOC107595923,LOC107687823,LOC107723394,LOC107593681,LOC107657629 coding upstream 22818 16666676 ~ 16670759 (+)
rad54b rad54b coding upstream 28799 16652160 ~ 16664778 (+)
LOC122359829 fsbp,LOC107593680,LOC107723453,LOC107687811,LOC107706263,LOC107595917 coding upstream 35714 16654048 ~ 16657863 (+)
virma si:ch211-79l20.4,kiaa1429,LOC107706278,LOC107595823,LOC107723452,LOC107593674 coding upstream 47138 16631606 ~ 16646439 (+)
LOC122360491 LOC107706488 coding downstream 763 16694412 ~ 16697173 (+)
galnt1 galnt1,LOC107657719,LOC107723435,LOC107687813,LOC107706221,LOC107593713 coding downstream 8311 16701960 ~ 16781427 (+)
nr4a3 nr4a3,LOC107657725,LOC107596005,LOC107706170,LOC107687818,LOC107593690,LOC107723503 coding downstream 180157 16873806 ~ 16896250 (+)
invs invs,LOC107596027,LOC107706121,LOC107593695,LOC107657729,LOC107723456 coding downstream 235193 16928842 ~ 16950628 (+)
si:ch211-197h24.6 LOC107706089,LOC107689894,LOC107596055,LOC107657728,LOC107593693 coding downstream 275346 16968995 ~ 16978309 (+)
G113375 NA non-coding upstream 9747 16682235 ~ 16683830 (+)
G113379 NA non-coding upstream 70895 16593092 ~ 16622682 (+)
G113377 NA non-coding upstream 75855 16586100 ~ 16617722 (+)
G113020 NA non-coding upstream 274527 16417880 ~ 16419050 (+)
G113019 NA non-coding upstream 277947 16414657 ~ 16415630 (+)
G113398 LOC107687814,LOC107706205,LOC107595951,LOC107593683 non-coding downstream 104456 16798105 ~ 16802754 (+)
G113401 alg2,LOC107706186,LOC107723517,LOC107593685,LOC107657723 non-coding downstream 125746 16819395 ~ 16820019 (+)
G113512 NA non-coding downstream 175996 16869645 ~ 16869869 (+)
G113537 NA non-coding downstream 274285 16967934 ~ 16968793 (+)
G113539 steap4,LOC107689887,LOC107705999,LOC107671369,LOC107723567,LOC107593701 non-coding downstream 300447 16994096 ~ 17059091 (+)
cblc cblc,LOC107699489,LOC107595708,LOC107714982,LOC107593659,LOC107723469,LOC107657700 other upstream 381205 16302542 ~ 16312372 (+)
hcst NA other upstream 769780 15920075 ~ 15923797 (+)
si:dkey-56f14.7 si:dkey-56f14.7,LOC107699525,LOC107714704,LOC107595251,LOC107570835 other upstream 993639 15677165 ~ 15699938 (+)
LOC122360429 LOC107714724,LOC107699479,LOC107595242,LOC107657660,LOC107723414 other upstream 1033964 15648271 ~ 15659613 (+)
G112816 LOC107595169,LOC107699531,LOC107714691,LOC107723516,LOC107657655 other upstream 1217376 15444659 ~ 15476201 (+)
sec61b sec61b,LOC107593687,LOC107723518,LOC107595994,LOC102796100 other downstream 73411 16767060 ~ 16823983 (+)
stx17 stx17,LOC107706149,LOC107723570,LOC107593691,LOC107657726 other downstream 207019 16900668 ~ 16911881 (+)
acbd7 acbd7,LOC107549230,LOC107717797,LOC107681577,LOC108440763 other downstream 706635 17400284 ~ 17407196 (+)
mettl25b rrnad1,LOC107689858,LOC107549245,LOC107587879 other downstream 1038955 17732604 ~ 17737482 (+)
ensab ensab,LOC107587831,LOC107741750,LOC107663348,LOC107597988,LOC107732479,LOC107689847,LOC108441925,LOC108268136 other downstream 1148153 17841802 ~ 17847410 (+)

Expression


Co-expression Network