G112816 (LOC107595169,LOC107699531,LOC107714691,LOC107723516,LOC107657655)


Basic Information

Item Value
gene id G112816
gene name LOC107595169,LOC107699531,LOC107714691,LOC107723516,LOC107657655
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 15444659 ~ 15476201 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU166579
AGAAAACCTTGATCTGGGTCTTATCTTCAGAGAACCCTAAAGCTCCTGCGGACACTTGGCAGATGTAGACTCTCTCATCTTCCACCATGACTGGGGAGATGGTGATGGACAGGTCTTCTCCCATGGTTAAGCGATCTGTCATTGTTGTGCCTGAATCAACACCAAAACCTTGTGGAGACTTGAAAGCAATTTGCTTTCTTGCACCTGCAACCTCAACCACTGGACCACAATGGCAGAGCCCGGTGCAGATGTGGTATAGCTGCAATGCAGTTTAGCTGTCTCCCCTTTAATCACTTCCACCTCTGGAGTCACCTTGACCGTGACCGAAGCCAGACATACTGCAGCGCAACAGCAAGCAAGGTGCAGAAAATCCCGAAGCGTCCCAACATCGCTCTCTCCATAGTTGCGTCTCAACTTGGCGGCTTTGTTTGGCGTCGCGCCGTTGTGTTTCTTTGCAGCTTCTGGTCTCGGTACAGCTCCTTCGCCCTCTGCTCTGCTGTCGTGCTCACTCGCAGTAATGCGGTGCGCTCCCCAGTCCTTCTTGGCGCAAGAAATCTGATGCGGATGGCAGTGACTTGG

Function

NR:

description
PREDICTED: basal cell adhesion molecule-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166579 True 579 TUCP 0.52 3 15444659 15476201

Neighbor

gene id symbol gene type direction distance location
apoc2 LOC107582090,LOC107657613,LOC107699533,LOC107595154,LOC107714719 coding upstream 24237 15418103 ~ 15420422 (+)
apoa2 NA coding upstream 28975 15413969 ~ 15415684 (+)
apoeb apoeb,LOC107714700,LOC107595129,LOC107723536,LOC107699536,LOC107657653 coding upstream 40043 15402435 ~ 15404616 (+)
LOC122360315 LOC107723413,LOC107657612,LOC107714702,LOC107723544,LOC107714703,LOC107595112,LOC107596500,LOC107699537 coding upstream 47774 15395427 ~ 15396885 (+)
LOC122359883 LOC107596479,LOC107714701,LOC107657652,LOC107723545,LOC107582169 coding upstream 61598 15381396 ~ 15383061 (+)
LOC122360844 NA coding downstream 21133 15497334 ~ 15502997 (+)
ywhabl ywhabl,LOC107595301,LOC107570839,LOC107723438,LOC108429958,LOC108265441,LOC105896388 coding downstream 231350 15707551 ~ 15717886 (+)
smg9 smg9,LOC107595308,LOC107699520,LOC107570844,LOC107657666 coding downstream 249538 15725739 ~ 15730291 (+)
si:dkey-79d12.4 NA coding downstream 254494 15730695 ~ 15735708 (+)
LOC122360120 LOC107596518 coding downstream 312381 15788582 ~ 15797155 (+)
G112814 NA non-coding upstream 3081 15440831 ~ 15441578 (+)
G112809 NA non-coding upstream 11375 15430848 ~ 15433284 (+)
G112775 NA non-coding upstream 138653 15199638 ~ 15306006 (+)
LOC122360506 NA non-coding upstream 410170 15014554 ~ 15034489 (+)
LOC122360138 LOC107751180 non-coding upstream 614113 14829927 ~ 14830546 (+)
LOC122360481 NA non-coding downstream 54369 15530570 ~ 15533701 (+)
G112841 NA non-coding downstream 152942 15629143 ~ 15629458 (+)
G112837 NA non-coding downstream 154343 15630544 ~ 15636060 (+)
G112850 NA non-coding downstream 185035 15661236 ~ 15662316 (+)
G112866 NA non-coding downstream 277657 15753858 ~ 15755828 (+)
G112811 LOC107657655,LOC107582137,LOC107723516 other upstream 2582 15435772 ~ 15442077 (+)
apoc4 NA other upstream 31818 15411808 ~ 15412841 (+)
apoc1 NA other upstream 33647 15409481 ~ 15411012 (+)
LOC122360316 LOC107699540,LOC107723413,LOC107657612,LOC107714702,LOC107723544,LOC107714703,LOC107595112,LOC107596500,LOC107699537 other upstream 56631 15383607 ~ 15388028 (+)
LOC122360840 LOC107582135 other upstream 161679 15279044 ~ 15282980 (+)
LOC122360429 LOC107714724,LOC107699479,LOC107595242,LOC107657660,LOC107723414 other downstream 172070 15648271 ~ 15659613 (+)
si:dkey-56f14.7 si:dkey-56f14.7,LOC107699525,LOC107714704,LOC107595251,LOC107570835 other downstream 200964 15677165 ~ 15699938 (+)
hcst NA other downstream 443874 15920075 ~ 15923797 (+)
cblc cblc,LOC107699489,LOC107595708,LOC107714982,LOC107593659,LOC107723469,LOC107657700 other downstream 826341 16302542 ~ 16312372 (+)
sec61b sec61b,LOC107593687,LOC107723518,LOC107595994,LOC102796100 other downstream 1290859 16767060 ~ 16823983 (+)

Expression


Co-expression Network