G112866


Basic Information

Item Value
gene id G112866
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 15753858 ~ 15755828 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU166651
TTCTATTTCTATGCGCAAATCCTTGCTTGTCTTCCTCTAGGAATGACGTAATGACCTTGGGCCATGTGACGCACTAGCCTCATGTGGATCCTTCCGCCAGGGCATCCTGTAGCACAGAACCCACAACAACCGTCCCGATAAGTGTTTAGTCCAGCTCAATCTGGGAGCCCATGTAAAGTAATACATTAGGATGTTCCCACTATATCTTTGGCCTTCACGGTAGGCCTTTTGGAGACTCTACAAACATCTAATTCTTCAGTCAGGTCATGCAGAGTacgaaaagtgtttattttcaatCTACGAAGAATACTGTGAAATGCACAATTCGGCAATTCAGAATCAGCCAAATCGATACAATTCAGGGACATTTTTATGGTAccataatcaaattaaatagaaaCAATAAATCGGTTACTGTTtcagcaataaaatatatattcttaacaACCGTTAGACATAgctcattatttttcttttgcaaatgcaaatttacAGTGATTGCGtaacagcaaaacatttaaaagaaagcaaaaataaatatgcatgtgaaGACTGAGACAGAAAGGCAACACTTTGTAAACACAGCATAGGTTATAAGTTTAACATACAAAGCTGCAcacaattaatttatataaaaaatattcatgatATAGCAAAGGTACAATCTAAAAAGGCAAATTCTAAAATAGTTTGTGACAATCGTGAGATGACACTGTTCACTTTTacaggcagtttttttttttttacaaaacaaatactaCAAGAAGAAAATCTGTTATGTACAATCACAATATCAAGATaatgaaatgtagaaatatgGCTTGTAATTAAATTATGGCTTGAGGCGATGTATACTACCACCTAGTGGTattggaaaaaaatacagtacaattaCAGTACACTTAGGTAAATGGTAATATTGTGCAcagaatttaatataattaattaatattaatgtttttgttaatgcaGTCCTCCCCACATCAGATGTGATTCTTCTTAAAGGTGATTTTCCATTAGTCAGGAGCGTTATATGcagaaactaatttaaaatgtcactcACACAGCACTCTTTGGCTTCAGTAAATTCTATTACTTTTAATAGAAAAGGTATAAGATGCTTGCTGTTTTAGAGGTAACTTCATGAACTATTACACCTGAGCTGAACCGCTGGTCAAATTTGGGAATGTGCGTCCATTGAGTATTTCAGTGAATAATTACATTCACTCAAACCAACTCTACCTCATTAAATATCACTCAAGTACACCATGAATAAAAAGttaccaaaacatttaaacactcaTTACAAAAGCTACTAGAAAAGCTGTGCTTTTCATATCTACGACTAATAAAGTTCAAGTATGCAGTCCACGCAAGTACGCATCCAACTTTGGCAAAGTTGAGAAATAATAGCTGTGTGCGATTATGATCCAAGTTATAACAAAGCCATTGTTTTGTGGAAGAGaagtttaaacatatttttagcaTATAAAAAAACGTAGAGCTAAAAaccttaaagaaaaaataaataatggtaaATAGGTGGAATGAAAAGCTTAAAGTTGATTTGAATATATAGGCCCAAAATCAGTGAAAAATGTAGAAAGTCAACATGCTTGACGCTATATTTCAAGTTTATgatttcattataatatgctataAAGTTCCCTGCAGATTGGCAGATGCGTCTTACATTACAGATACACAGGCTTTGGTTACCCTTTCACTGTCCCCCAGGTTTGGAGGGTAGCGTGAGGCACAATGAACTGAGGAGGTGCTTTGGGTACGACGTAGTAAGCAAACAATGGAGAAGGTGCTGGTGCACATACAGTCGTGAAGAACACGCCTCTCTTCTTCTTGTACTTGGGCCATATCTGTGCCGGGTTATAAAAGTACTGCGGGCCAGGGATCTGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU166651 True 1915 lncRNA 0.36 2 15753858 15755828

Neighbor

gene id symbol gene type direction distance location
si:dkey-79d12.4 NA coding upstream 18150 15730695 ~ 15735708 (+)
smg9 smg9,LOC107595308,LOC107699520,LOC107570844,LOC107657666 coding upstream 23567 15725739 ~ 15730291 (+)
ywhabl ywhabl,LOC107595301,LOC107570839,LOC107723438,LOC108429958,LOC108265441,LOC105896388 coding upstream 35972 15707551 ~ 15717886 (+)
LOC122360844 NA coding upstream 250861 15497334 ~ 15502997 (+)
apoc2 LOC107582090,LOC107657613,LOC107699533,LOC107595154,LOC107714719 coding upstream 333436 15418103 ~ 15420422 (+)
LOC122360120 LOC107596518 coding downstream 32754 15788582 ~ 15797155 (+)
fpr1 fpr1,LOC107714672,LOC107699476,LOC107593626,LOC107657616,LOC107723415,LOC107595349,LOC108429924,LOC108265369 coding downstream 61160 15816988 ~ 15819121 (+)
si:dkeyp-84f3.5 LOC107699518,LOC107714741,LOC107595358,LOC107657669,LOC107723548,LOC107593627 coding downstream 64729 15820557 ~ 15825861 (+)
znf1035 LOC107714742,LOC107595368,LOC107723434,LOC107593629,LOC107657596,LOC107699453 coding downstream 77679 15833507 ~ 15854653 (+)
im:7147486 LOC107714743,LOC107699517,LOC107595378,LOC107657670,LOC107593630,LOC107723558 coding downstream 100103 15855931 ~ 15861906 (+)
G112850 NA non-coding upstream 91542 15661236 ~ 15662316 (+)
G112837 NA non-coding upstream 117798 15630544 ~ 15636060 (+)
G112841 NA non-coding upstream 124400 15629143 ~ 15629458 (+)
LOC122360481 NA non-coding upstream 220157 15530570 ~ 15533701 (+)
G112818 NA non-coding upstream 246203 15468481 ~ 15507655 (+)
LOC122360188 NA non-coding downstream 1711 15757539 ~ 15788226 (+)
G112875 NA non-coding downstream 6950 15762778 ~ 15762998 (+)
G112881 NA non-coding downstream 32415 15788243 ~ 15867545 (+)
G112914 NA non-coding downstream 203189 15959017 ~ 15960580 (+)
G112919 NA non-coding downstream 231861 15987689 ~ 15987924 (+)
si:dkey-56f14.7 si:dkey-56f14.7,LOC107699525,LOC107714704,LOC107595251,LOC107570835 other upstream 53920 15677165 ~ 15699938 (+)
LOC122360429 LOC107714724,LOC107699479,LOC107595242,LOC107657660,LOC107723414 other upstream 94245 15648271 ~ 15659613 (+)
G112816 LOC107595169,LOC107699531,LOC107714691,LOC107723516,LOC107657655 other upstream 277657 15444659 ~ 15476201 (+)
G112811 LOC107657655,LOC107582137,LOC107723516 other upstream 311781 15435772 ~ 15442077 (+)
apoc4 NA other upstream 341017 15411808 ~ 15412841 (+)
hcst NA other downstream 164247 15920075 ~ 15923797 (+)
cblc cblc,LOC107699489,LOC107595708,LOC107714982,LOC107593659,LOC107723469,LOC107657700 other downstream 546714 16302542 ~ 16312372 (+)
sec61b sec61b,LOC107593687,LOC107723518,LOC107595994,LOC102796100 other downstream 1011232 16767060 ~ 16823983 (+)
stx17 stx17,LOC107706149,LOC107723570,LOC107593691,LOC107657726 other downstream 1144840 16900668 ~ 16911881 (+)
acbd7 acbd7,LOC107549230,LOC107717797,LOC107681577,LOC108440763 other downstream 1644456 17400284 ~ 17407196 (+)

Expression


Co-expression Network