G112881


Basic Information

Item Value
gene id G112881
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056714.1
NCBI id CM032083.1
chromosome length 28146790
location 15788243 ~ 15867545 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU166670
tttcttctttttttttttttttttttttttttttttttttttaatgtttgttctcagatgtttattttatgtttgccAAATTATATTGCAACATGCCATGATTATGGGCTCAAAAAAATCTGGGCGAGCTTAGTTGGAGTTGATGGTGGTGTTGATCCAGGAGATGTAGTTGCAGACCTTGGTATAGACACCAGGTTTGTTCCTCTGGGCACAGCCGTAACCCCAGGACACAATACCCTGCAGCCGGTTGCTGCACACCACTGGGCCACCAGAGTCACCCT
>TU166671
ttttttttttttttttttttttgtttgttctcagatgtttattttatgtttgccAAATTATATTGCAACATGCCATGATTATGGGCTCAAAAAAATCTGGGCGAGCTTAGTTGGAGTTGATGGTGGTGTTGATCCAGGAGATGTAGTTGCAGACCTTGGTATAGACACCAGGTTTGTTCCTCTGGGCACAGCCGTAACCCCAGGACACAATACCCTGCAGCCGGTTGCTGCACACCACTGGGCCACCAGAGTCACCCT

Function

GO:

id name namespace
GO:0004175 endopeptidase activity molecular_function
GO:0004252 serine-type endopeptidase activity molecular_function
GO:0016787 hydrolase activity molecular_function
GO:0008233 peptidase activity molecular_function
GO:0008236 serine-type peptidase activity molecular_function
GO:0017171 serine hydrolase activity molecular_function

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU166670 True 281 lncRNA 0.41 2 15788243 15867545
TU166671 False 258 lncRNA 0.44 2 15841512 15867545

Neighbor

gene id symbol gene type direction distance location
si:dkey-79d12.4 NA coding upstream 52535 15730695 ~ 15735708 (+)
smg9 smg9,LOC107595308,LOC107699520,LOC107570844,LOC107657666 coding upstream 57952 15725739 ~ 15730291 (+)
ywhabl ywhabl,LOC107595301,LOC107570839,LOC107723438,LOC108429958,LOC108265441,LOC105896388 coding upstream 70357 15707551 ~ 15717886 (+)
LOC122360844 NA coding upstream 285246 15497334 ~ 15502997 (+)
apoc2 LOC107582090,LOC107657613,LOC107699533,LOC107595154,LOC107714719 coding upstream 367821 15418103 ~ 15420422 (+)
si:ch211-261d7.3 si:ch211-261d7.3,LOC107714745,LOC107699514 coding downstream 3680 15871225 ~ 15875188 (+)
zgc:66448 LOC107699513,LOC107723510,LOC107657674,LOC107593703,LOC107714656,LOC107595406 coding downstream 7756 15875301 ~ 15882167 (+)
si:ch211-261d7.6 LOC107714670,LOC107699512,LOC107595413,LOC107723568,LOC107657673,LOC107593703 coding downstream 15058 15882603 ~ 15891170 (+)
LOC122360621 zgc:92590,LOC107715016,LOC107596533,LOC107699475 coding downstream 25045 15892590 ~ 15894474 (+)
LOC122359969 LOC107714685,LOC107699511,LOC107595429,LOC107657677,LOC107723481 coding downstream 31321 15898866 ~ 15908735 (+)
LOC122360188 NA non-coding upstream 17 15757539 ~ 15788226 (+)
G112875 NA non-coding upstream 25245 15762778 ~ 15762998 (+)
G112866 NA non-coding upstream 32415 15753858 ~ 15755828 (+)
G112850 NA non-coding upstream 125927 15661236 ~ 15662316 (+)
G112837 NA non-coding upstream 152183 15630544 ~ 15636060 (+)
G112914 NA non-coding downstream 91472 15959017 ~ 15960580 (+)
G112919 NA non-coding downstream 120144 15987689 ~ 15987924 (+)
G112927 pard6ga,LOC107699467,LOC107596551,LOC107715090,LOC107578647,LOC107657620 non-coding downstream 140074 16007619 ~ 16151438 (+)
LOC122361097 NA non-coding downstream 280113 16147658 ~ 16148829 (+)
LOC122359929 LOC107723533,LOC107657692 non-coding downstream 330793 16198338 ~ 16199708 (+)
si:dkey-56f14.7 si:dkey-56f14.7,LOC107699525,LOC107714704,LOC107595251,LOC107570835 other upstream 88305 15677165 ~ 15699938 (+)
LOC122360429 LOC107714724,LOC107699479,LOC107595242,LOC107657660,LOC107723414 other upstream 128630 15648271 ~ 15659613 (+)
G112816 LOC107595169,LOC107699531,LOC107714691,LOC107723516,LOC107657655 other upstream 312042 15444659 ~ 15476201 (+)
G112811 LOC107657655,LOC107582137,LOC107723516 other upstream 346166 15435772 ~ 15442077 (+)
apoc4 NA other upstream 375402 15411808 ~ 15412841 (+)
hcst NA other downstream 52530 15920075 ~ 15923797 (+)
cblc cblc,LOC107699489,LOC107595708,LOC107714982,LOC107593659,LOC107723469,LOC107657700 other downstream 434997 16302542 ~ 16312372 (+)
sec61b sec61b,LOC107593687,LOC107723518,LOC107595994,LOC102796100 other downstream 899515 16767060 ~ 16823983 (+)
stx17 stx17,LOC107706149,LOC107723570,LOC107593691,LOC107657726 other downstream 1033123 16900668 ~ 16911881 (+)
acbd7 acbd7,LOC107549230,LOC107717797,LOC107681577,LOC108440763 other downstream 1532739 17400284 ~ 17407196 (+)

Expression


Co-expression Network