CI01000001_00426295_00431004 (IYD)


Basic Information

Item Value
gene id CI01000001_00426295_00431004
gene name IYD
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 426065 ~ 431232 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_00426295_00431004.mRNA
CAATAAAAACGCATTGCTTATTATTATACTCTTAAATAATGTTATAATTATTATAACTAGTACAGATATATTATATGGATGTTAACAGAATGTTATAACGAGACTTAGATTGCATATTTATATTAGAGATAACTGCGGTATTGTGTTCCCAATATTAACAGAAGAAAGTGAGTCCCTCCCCTTTCACTGAACTTTAGTGAAATTCCTCAAGACTCACTCGTTGGTTCATCATGGCGGTGTTTTCGACTCTTACTCCGGTGTTCGTGGCGGTTTTGTGCGTGATTATCGGGTTTCTCTTCAAAAACTCCCTGAGGAGAGAGACCAGATCAAAGCAGAAGCGTTCAGAGGATGATGATGATTGGCTTGACACAACAGAGGAAGAAAACTTGCCCTATATCCCGTACACTCCAGCTCAGTACTCTGCTGCCGAGATGCTGGAGCGCTCGGAGAAGTTTTACTCGCTCATGAATCTGAGACGGTCTGTCCGCTTCATCAGCCCAGAACCGGTACCGAAAGAAGTGATCGACAATGTCATACGCACTGCAGGCACTGCACCCAGTGGAGCTCACACTGAGCCCTGGACGTTTGTGGTGGTGTCTGATGCTGATGTCAAACACAAGATCAGAGAGATTGTGGAGGAAGAGGAGGAGATCAACTACAAGCAGAGGATGGGAGACAAGTGGGTCCATGACCTGAAGAGACTGAGGACAAACTGGGTGAAGGAGTATTTGGATGTGGCTCCGTATCTGATTCTAGTGTTTAAGCAGACATATGGAGTTCTGCCCAATGGCAAGAAAAAGACTCACTATTACAATGAAATCAGCGTGTCGATTTCCTGTGGGATTCTACTGGCCGCCCTGCAGAATGTTGGGCTGGTTACCGTGACGACCACTCCTCTGAACTGCGGTCCACAGCTCAGGTCCCTCCTCCAGCGACCAGCCAATGAGAAGCTTCTAATTTTGCTCCCTGTTGGCTACCCTGCTTCTGACGCCAAAGTGCCTGACCTCAAACGCAAGGACCTCAGTGACATAATGGTGACTGTGTGACACTATCAACAAGCACCAGCTGTTGGAAGCCATGATAAGACCAAATTTACAGACCTGTTTTAAATTTATGATTATGTTCTTTGTAATAGAAATGAGTTATGGCAAATTAGACCATGTTCTCATATCACTGCTTTGTTTTTATGATACCTTACCATAAAGGGATGTTACAGTAATAGTACACATTAGAATACTTTTATTGAATCTGCTGTGATCTATGCAAAACATTAA

Function

symbol description
iyd Predicted to enable oxidoreductase activity. Predicted to be located in cytoplasmic vesicle membrane. Predicted to be integral component of membrane. Is expressed in gut; liver; thyroid follicle; and thyroid primordium.

NR:

description
Iodotyrosine dehalogenase 1 precursor

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K17231 IYD, DEHAL1; iodotyrosine deiodinase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_00426295_00431004.mRNA True 1274 mRNA 0.44 5 426065 431232

Neighbor

gene id symbol gene type direction distance location
CI01000001_00400604_00401694 NA coding upstream 24141 400425 ~ 401924 (+)
CI01000001_00353909_00354838 NA coding upstream 71227 353909 ~ 354838 (+)
CI01000001_00351249_00352199 NA coding upstream 72543 350551 ~ 353522 (+)
CI01000001_00343451_00343828 NA coding upstream 81666 343451 ~ 344399 (+)
CI01000001_00337674_00339265 NA coding upstream 86715 337281 ~ 339350 (+)
CI01000001_00433013_00435064 NA coding downstream 1781 433013 ~ 435539 (+)
CI01000001_00436821_00439097 NA coding downstream 5589 436731 ~ 439752 (+)
CI01000001_00440891_00444667 HTR6 coding downstream 9659 440891 ~ 444983 (+)
CI01000001_00483853_00488761 VWA1 coding downstream 52621 483853 ~ 488825 (+)
CI01000001_01088316_01091350 TSHZ2 coding downstream 657084 1088316 ~ 1091578 (+)
G12656 NA non-coding upstream 6830 418962 ~ 419235 (+)
G12648 NA non-coding upstream 9224 414496 ~ 416841 (+)
G12629 NA non-coding upstream 52580 372764 ~ 373485 (+)
G12628 NA non-coding upstream 65848 359969 ~ 360217 (+)
G12618 NA non-coding upstream 66309 358871 ~ 359756 (+)
G12664 NA non-coding downstream 36870 468102 ~ 468433 (+)
G12674 NA non-coding downstream 73255 504487 ~ 504749 (+)
G12685 NA non-coding downstream 93242 524474 ~ 538363 (+)
G12686 NA non-coding downstream 108464 539696 ~ 545356 (+)
G12614 NA other upstream 115124 309144 ~ 310941 (+)
G13051 NA other downstream 612481 1043713 ~ 1045152 (+)
CI01000001_01668334_01670035 CAMK2N1B other downstream 1236788 1667762 ~ 1671167 (+)
CI01000001_03618075_03620436 NA other downstream 3185016 3618075 ~ 3621451 (+)
G15794 NA other downstream 4629986 5061218 ~ 5064704 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_022584 IYD coding NC_007134.7 CM002907.2 39774931 ~ 39784368 (-)