CI01000001_00436821_00439097


Basic Information

Item Value
gene id CI01000001_00436821_00439097
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 436731 ~ 439752 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_00436821_00439097.mRNA
ATGTCTGAGAAAGAGCTCGGCCAAAAGTGGGATCGCTGCCTCGCAGACTGCGCAATTAAAGTCGGTACCGGTCTGGGTCTAGGAATTGTGTTCTCTGTTGTATTCTTCAAGCGAGCAGTAGAGTTGCATCAGTTATGGATTCGGTCATCTGCCTTGCTTTTCTTAATTGAAGCCTGACTGCACTGTCAGACTGGTTGTCTTTCTCTCTCCATAATATACATGTTCTTGTACAGGACAGTCTGTGTTTATTTAATAAAATTATAAAGGAGATTTGAAGTTTGCTAAGGATGATATGAATGTGATTTTTTTTTTTTATTTATAAAAAAAAAATGGCCCTATAATATCATGCGTTCCAAAAATCATAGGCTTCTATTATAACCCCAGTGATAGCAGCCCACACTGTCCTCTGCCTTTTGACCCAGGCTAAGATGATTTTTGGCAACCATGCAAAACTAGTGCACTTATTATGCCTAAAGCAAAAAACCTGCAGTGTGTCCAGAGCAGTGTTGGCATGGTGACAGTTCTCCAACAGTGAAGTACAAGCATACATGTTTTTATTCCTCCGTGCTACTAATAATTGCACTTTTTTTTTTTTTCTTTTGTATTGTTTCTTTTTACCTAAAGGTAAAAGTACATATCAAAATAAGTTTCCATGCATGATCTTGTTCACAAGTAAGGCTTCAGAAATTGGTTGCAGGCATGTTTATGCTTATAAAATTACAAATATTAAATTAAATGTATCATCTCTTGCATTTGTCAAAGGTATTCACAACAGTTTTGGAAGACCGTCTTTTCAGCTTCTCTTTTGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_00436821_00439097.mRNA False 810 mRNA 0.37 3 436821 439730

Neighbor

gene id symbol gene type direction distance location
CI01000001_00433013_00435064 NA coding upstream 1282 433013 ~ 435539 (+)
CI01000001_00426295_00431004 IYD coding upstream 5589 426065 ~ 431232 (+)
CI01000001_00400604_00401694 NA coding upstream 34897 400425 ~ 401924 (+)
CI01000001_00353909_00354838 NA coding upstream 81983 353909 ~ 354838 (+)
CI01000001_00351249_00352199 NA coding upstream 83299 350551 ~ 353522 (+)
CI01000001_00440891_00444667 HTR6 coding downstream 1161 440891 ~ 444983 (+)
CI01000001_00483853_00488761 VWA1 coding downstream 44123 483853 ~ 488825 (+)
CI01000001_01088316_01091350 TSHZ2 coding downstream 648586 1088316 ~ 1091578 (+)
CI01000001_01168378_01169553 NA coding downstream 727787 1167517 ~ 1169642 (+)
CI01000001_01209204_01212045 PFDN4 coding downstream 769474 1209204 ~ 1212252 (+)
G12656 NA non-coding upstream 17586 418962 ~ 419235 (+)
G12648 NA non-coding upstream 19980 414496 ~ 416841 (+)
G12629 NA non-coding upstream 63336 372764 ~ 373485 (+)
G12628 NA non-coding upstream 76604 359969 ~ 360217 (+)
G12618 NA non-coding upstream 77065 358871 ~ 359756 (+)
G12664 NA non-coding downstream 28372 468102 ~ 468433 (+)
G12674 NA non-coding downstream 64757 504487 ~ 504749 (+)
G12685 NA non-coding downstream 84744 524474 ~ 538363 (+)
G12686 NA non-coding downstream 99966 539696 ~ 545356 (+)
G12698 NA non-coding downstream 112723 552453 ~ 552967 (+)
G12614 NA other upstream 125880 309144 ~ 310941 (+)
G13051 NA other downstream 603983 1043713 ~ 1045152 (+)
CI01000001_01668334_01670035 CAMK2N1B other downstream 1228290 1667762 ~ 1671167 (+)
CI01000001_03618075_03620436 NA other downstream 3176518 3618075 ~ 3621451 (+)
G15794 NA other downstream 4621488 5061218 ~ 5064704 (+)

Expression


Co-expression Network