CI01000001_00506140_00517386 (CAMK1GB, CAMK1G)


Basic Information

Item Value
gene id CI01000001_00506140_00517386
gene name CAMK1GB, CAMK1G
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 505754 ~ 517386 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_00506140_00517386.mRNA
ATGACCATAGGTGAAGGGGGATGTGCCACACCGGCTTCACATAAACCAGGATCATGCTCTCTCTCAGAAAAACATAATCCCAGGGGAGCGTTCTCAGAGGTCTTCATGGTGAAGGAGAGGAAAACAGGGAAGCTTTTTGCTATGAAGTGTGTGAAGAAGAAAAACAAAAGGGACATCAACCTGGAGAACGAAATCGCTGTGTTGCGGAAGATCAAACACGACAATGTGGTTTGCTTGGAGGATTTCTATGAAAGTCGGACACATTACTACCTGGTCATGCAGCTGTATGTATTACTGCCTACTGAAGTTACTTTAAATCTCTTCGTGTTTTTATGGCATGTTGTTAAATTGCTCGTATATCCCATCAGAGTTTCAGGCGGTGAGCTGTTTGACCGGATCCTGGACCGGGGCATGTTCTCAGAGTTGGATGCTAGTCAGGTTATCAAACAGGTGCTGGAGGCAGTCAGCTACCTGCACAAAAACGGCATAGTACATCGTGATCTCAAGCCAGAGAATCTGCTCTACTACAGCCCTGATGAAAACTCCAAGATCATGATCAGTGATTTCGGCCTCTCTAAGATGGAAGACCATGGCATCATGTCCACGGCCTGCGGGACTCCAGGATATGTCGCCCCTGAAGTGTTGGCTCAGAAACCCTACAGCAAAGCTGTTGACTGCTGGTCTATTGGAGTCATCACCTACATCCTTCTCTGTGGATATCCTCCTTTCTACGAAGAAACTGAGACTCGTCTGTTTTCTAAAATCATGAAGGCGCAGTATGAGTTCGACTCGCCCTTCTGGGATGAAATCTCTGACTCTGCAAAGGACTTCATTCGCAACATGATGCAGAAGAATCCTAAGATGCGGTATGATACAGAACAGGCTCTCAGACACCCCTGGATTATAGGAAAGACGGCCCGGAGTCAGGACATCTACCATTCCGTCAGTGAACAGATCCAAAAAAACTTTGCCAAGTCCAAGTGGAAGCGAGCCTTCAACGCTACAGTGGCCATTCGTCAGATGAAGAAGCTGCAGCTGGCCCACTCTCAGACCTGTCTGAAGCAGATCCCTCCAACTGTGCCTGAGATCAAGGTCATCGCAACATCCACACCTGAATCCGTCCGCAAGAAGCTGTTCGCCGAGACCCCCGAACAAAACGGCAGTGTGCCCAGTAATCAGATGAACTTGCCGTCCAGCTCCACCGAGTCAAAGAGTCAGTACCACCCGGTCCGGGTCAGTCACAGCGAGACCACCCATGTTGGGACCCTTACCATTGCAGAGAAGGGCAAACATGTGTATCACTCGGAGCCAGCTGATCTAAATGGGTCTGTGACCTTTCACCCAGCCACTAGCAGCTTTCTGTGGGCAGGTCCTGCTGCTCTGCTCTGGTCAAAAGTGTTGGCAAGACAGCAGGCCACCGACCCGCACCGCTCTGAAATACTGATGTTTAGGGGAGTGCCTCCATATTTAAACACACACACACATGCTCACAGAGCACAAATACAACCTGTCACACACTCAAAAAAGACACAGTATCCCTGTAAACTCAGAGACCTCACCTAAAACTTTGTATTTTCCCTTGAGGAAACAGTTTTACATTATCAAGGACAATTATTCTCTCTGTATTAAAACATTTGGAGCAGGGGTCCGTGTAACTGGACGCTTGTATAAGGAGTATTAATTCTGTGCTTTTGTACATTTACTCTCTGTGATGCATGGCTAGTTTGTATTGTGCAATAATGTGTACCGCAGAAATGTGAGTGTGTAAAACACTGTAAGCTTATCGATGTTAGATGTACATCCCTGGAATAAGACACTAACTGAAGATCCAGCCTTTACTTTATTCGTTAAATAGGTTTTTTGGTAATTTATCTAGAGTGAAGGTTTATTTTTCTAATGCAGAAATTATTATTGTATGTTTATCCATTATATATTTTTGTCATAATAAA

Function

symbol description
camk1gb Predicted to enable calmodulin binding activity and calmodulin-dependent protein kinase activity. Acts upstream of or within locomotor rhythm. Is expressed in diencephalon; sensory system; and yolk syncytial layer. Orthologous to human CAMK1G (calcium/calmodulin dependent protein kinase IG).
camk1g Predicted to enable calmodulin binding activity and calmodulin-dependent protein kinase activity. Predicted to be involved in peptidyl-serine phosphorylation. Predicted to be located in endomembrane system. Predicted to be part of calcium- and calmodulin-dependent protein kinase complex.

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process

KEGG:

id description
K08794 CAMK1; calcium/calmodulin-dependent protein kinase I

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_00506140_00517386.mRNA True 1949 mRNA 0.46 11 505754 517386

Neighbor

gene id symbol gene type direction distance location
CI01000001_00500347_00500698 G0S2 coding downstream 5056 500083 ~ 500698 (-)
CI01000001_00493196_00498517 OTUD3 coding downstream 7237 492765 ~ 498517 (-)
CI01000001_00445369_00466166 TMCO4 coding downstream 38857 445240 ~ 466897 (-)
CI01000001_00362143_00378213 NA coding downstream 127541 361614 ~ 378213 (-)
CI01000001_00305883_00333574 FYCO1A coding downstream 171956 305491 ~ 333798 (-)
CI01000001_00538192_00559082 MICAL1 coding upstream 20207 537593 ~ 559082 (-)
CI01000001_00580789_00602408 SRC coding upstream 61690 579076 ~ 602628 (-)
CI01000001_00636063_00642086 KCNG1 coding upstream 118656 636042 ~ 642379 (-)
CI01000001_00716122_00741331 NA coding upstream 198717 716103 ~ 741620 (-)
CI01000001_00754687_00806154 ATP9A coding upstream 237179 754565 ~ 806542 (-)
G12955 NA non-coding downstream 706 504849 ~ 505048 (-)
G12946 NA non-coding downstream 91806 413684 ~ 413948 (-)
G12945 NA non-coding downstream 99595 405331 ~ 406159 (-)
G12896 NA non-coding downstream 146015 358871 ~ 359739 (-)
G12933 NA non-coding downstream 169721 335725 ~ 336033 (-)
G12963 NA non-coding upstream 87715 605101 ~ 606584 (-)
G12907 NA non-coding upstream 96834 614220 ~ 711316 (-)
G12997 NA non-coding upstream 300401 817787 ~ 818127 (-)
G12999 NA non-coding upstream 303003 820389 ~ 820588 (-)
CI01000001_00238241_00249437 NA other downstream 248237 238241 ~ 249437 (-)
CI01000001_00124107_00131285 ELOVL4B other downstream 370829 122814 ~ 131380 (-)
G14104 NA other upstream 1246283 1763669 ~ 1771468 (-)
G14219 NA other upstream 1476824 1994210 ~ 1994898 (-)
G14228 NA other upstream 1538588 2055974 ~ 2056478 (-)
CI01000001_02258523_02262621 NA other upstream 1742003 2258442 ~ 2263103 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A other upstream 3874928 4392314 ~ 4399804 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_021922 camk1gb coding NC_007134.7 CM002907.2 39558508 ~ 39597901 (+)