LOC122323198 (LOC107741381,LOC107697634,LOC107569150,LOC107557170,LOC107748085,LOC107697635,LOC107569152,LOC107557168,LOC107748086)


Basic Information

Item Value
gene id LOC122323198
gene name LOC107741381,LOC107697634,LOC107569150,LOC107557170,LOC107748085,LOC107697635,LOC107569152,LOC107557168,LOC107748086
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 5928406 ~ 5932318 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043216889.1
atgtggATCACTGTAAACATTTGCCTGTATCTGTCTTTTAATTGCATCTCTGCAGCGTCAAATTACAGATCAGGTACTTGTCAGCTCCAGGGACACTTCACGTTAAATGGAATGTACCAGGATGGAGATGTTATACTCGGAGGCCTGTTTGAGGTTCATTTTTTCACTGTGTTCCCAGAGTTGAGCTTCAGAACTGAACCAGAATCACCATACTGTGAAAAGTTTGATATGGAAAGTTTCCAGCAGGCACAGACCATGGTTTTTGCTATAGATGAGATCAATAAGAATCCAAATCTGCTGCCTAACATCACTCTTGGTTACCATCTTTATGACAACTGTGTGATGCTAGGAATGGCATTTCGTGCTGCCATAGCCCTTGTTAGTGGAACAGAAGAGAGGTATTCCAACCTCAACTGCACTGGCCCTCCTCCAGTGATTGGGATTGTGGGAGATCCAGGTTCAACTCCATCCATTGCAATTTCCAGTGTTCTGGGACTGTTTCGAGTACCTATAGTTAGTCACTATGCCACCTGCTCCTGTTTGAGTGACAGGAAAAAGTACCCCTCTTTCTTCAGAACAATCCCCAGTGATGCCTTCCAGGTGCGGGCTATGATTCAGATCTTGAGACATTTTGGATGGACCTGGGTTGGTCTTTTGTACAGTGATGATGATTACGGCATCTATGCTTCTTTGTCCTTCAAGCAAGAAATGCAATTGTTTGGAGGTTGTGTTGCTTTTTCTGAAATCCTGCCCCATGATAACAACCTAAAAGACATTCAGCGAATAATAGGAGTGATCCAGGCCTCTACAGCTAGAGTGGTAGTTGTTTTTTCTACTTCATCCTATCTGATGACTTTGATGGATGAAGTGGTTTTGCAAAACCTGACAGGCAGACAGTGGATTGCAAGTGAAGCATGGGCCACCTCCCCTGTGTTTCACACTTCACGTTTCCTGCCTTTTTTGGGGGGTACACTGGGCATTGCCATCAGACGTGGAGAGATCCTAGGACTGCAAGAGTTTTTGCTGCGTCTTTGTCCCAGCAATGATTCAAGAAATAATATGCTGAAGATCTTTTGGGAAAACATGTTCAGGTGCAGTTTTAAAACTGGGGCTACAGCGATAGATGGAGAGCAAGTGAAAAAGGTGTGTACAGGACAGGAGGATCTGAGCACAACAAACACACCATACACTGATGTTTCTGGGCTGAGAGCAGCATATAATGTCTATAAGGCAGTTTATGCTCTCGCACATGCACTTCATGACCTGATGCAGTGTGAGGAGGGTAGTGGACCATTCAGTAGGAACAGCTGTGCTGAAATAACCAATCTAAAACCGTGGCAGATGGTTCACTACCTACAGAAAGTGAAGTTCACCACAGGATTTGGTGATCATGTGTCATTTGATAAGAATGGAGATGCTCTGGCCATCTATGATGTGTTGAACTGGCAGCCGAGCTCTGATGGGTCAATAAGGATCTACACAGTTGGTGTAGTAAATGAAGGGGCAGGGAATGGGAAAGTGCTTTCACTGAACAAGGATGCGTTATACTGGAACTTTCAGCTTAAAAAACCCCCACGGTCTGTATGCAGTGAGAGCTGTCCCCCAGGCACCAGACAAGCCATGAGGAAGGGCCTTCCTGTCTGCTGTTTTGACTGCCTGCCATGTGGAGATGGAGAGATTTCTAATGCAACAGATGCAATTGAGTGTACTGCATGTCCAGATGAGTTCTGGTCCAATCCGGATAAGGATCAGTGTGTTCCGAAAGAAGTAGAGTTTCTTTCCTATGAGGATCCACTGGGCATCTCTCTGACCACTGCCTCTTTGCTTGGCACCTGCATCTGTGTTCTTGTGATGGTTATCTTCGCTCACCACCGTAACACTCCTATAGTACGAGCCAACAATTCAGAGCTCAGCTTCCTGCTGCTGTTGTCACTCaaactgtgttttctgtgtgtgctgCTGTTCATTGGCCGACCACAGTTATGGACATGTCAGTTAAGACATGCTGTGTTTGGTATAAGCTTTGTCCTGTGTGTCTCCAGCATCCTGGTCAAGACTATGGTAGTAATAGCTGTGTTCAAGTCATCTCGACCAGAGGGTAAAGGGGCAATGAAATGGTTTGGAGCAGCTCAACAAAGATGCACAGTTCTGGTCCTAACAGCACTTCAGGTTGTGATATGTGCAGTCTGGCTATCAACTGCCTCTCCAACACCACATAAAAACAGCCAGTATACTCGCTCTAAAATAGTATATGAATGTGCTATAGGATCAGTGGCTGGGTTTTCTTTGCTCCTCGGATACATTGGACTCTTGGCAGCAGTAAGCTTTCTATTAGCCTTTCTTGCGAGAAATCTACCAGataattttaatgaagcaaAGTTCATCACGTTTAGTATGTTGATCTTCTGTGCTGTGTGGATTGCGTTTGTTCCAGCATATGTGAGTTCACCAGGGAAATATGCAGTGGCTGTGGAGATATTTGCCATCCTAGCTTCCAGTTTTGGATTACTGGTGGCCATATTTGCCCCAAAGTGCTACATCATTCTTTTACAtccagagagaaacacaaaaaaagccatcatgggaagagaaacacaaaagaaatag

Function

NR:

description
PREDICTED: extracellular calcium-sensing receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043216889.1 True 2607 mRNA 0.45 6 5928406 5932318

Neighbor

gene id symbol gene type direction distance location
LOC122323201 LOC107557170,LOC107748085,LOC107741381,LOC107748086,LOC107697634,LOC107557168,LOC107741383,LOC107569151,LOC107707880,LOC107569150 coding upstream 3843 5921291 ~ 5924563 (+)
LOC122322966 NA coding upstream 7463 5919685 ~ 5920943 (+)
LOC122322887 si:dkey-47k20.3,LOC107569155,LOC107741380,LOC107676312,LOC107697634,LOC107741381,LOC107557170,LOC107748085,LOC107676311,LOC107748086 coding upstream 13964 5911025 ~ 5914442 (+)
LOC122362979 si:dkey-47k20.2,LOC107676311,LOC107569153,LOC107741377,LOC107697634,LOC107741381,LOC107557170,LOC107569155,LOC107569150,LOC107748086 coding upstream 22491 5902171 ~ 5905915 (+)
LOC122362980 si:dkey-47k20.1,LOC107569154,LOC107676314,LOC107676311,LOC107569153,LOC107741377,LOC107697634,LOC107741381,LOC107557170 coding upstream 27638 5734427 ~ 5900768 (+)
LOC122323199 LOC107569152,LOC107697635,LOC107557170,LOC107741381,LOC107748085,LOC107697634,LOC107569150,LOC107569151,LOC107741383 coding downstream 7633 5939951 ~ 5943398 (+)
LOC122323197 LOC107569152,LOC107697635,LOC107557170,LOC107741381,LOC107697634,LOC107748085,LOC107569150,LOC107557168,LOC107748086,LOC107741383 coding downstream 21932 5954250 ~ 5958173 (+)
LOC122323200 LOC107569152,LOC107697635,LOC107557170,LOC107748085,LOC107741381,LOC107697634,LOC107569151,LOC107557168,LOC107748086 coding downstream 37969 5970287 ~ 5973815 (+)
LOC122322895 si:dkey-47k20.8,LOC107741383,LOC107569151,LOC107748085,LOC107557170,LOC107697635,LOC107569152,LOC107557168 coding downstream 48373 5980691 ~ 5984732 (+)
LOC122322932 LOC107741383,LOC107569151,LOC107557170,LOC107748085,LOC107557168,LOC107748086,LOC107741381,LOC107697635 coding downstream 55216 5987534 ~ 5991345 (+)
G124622 v2rx1,LOC107703364,LOC107568274,LOC107716020 non-coding upstream 268173 5659906 ~ 5660233 (+)
G124595 NA non-coding upstream 573426 5354713 ~ 5354980 (+)
G124544 NA non-coding upstream 744869 5011405 ~ 5183537 (+)
G124547 NA non-coding upstream 870568 5056750 ~ 5057838 (+)
G124533 NA non-coding upstream 1020237 4903768 ~ 4908169 (+)
G124672 NA non-coding downstream 88923 6021241 ~ 6021636 (+)
G124673 NA non-coding downstream 91341 6023659 ~ 6023991 (+)
G124703 NA non-coding downstream 295163 6227481 ~ 6230584 (+)
LOC122362614 NA non-coding downstream 358204 6290522 ~ 6290901 (+)
G124711 NA non-coding downstream 363612 6295930 ~ 6296436 (+)
G124612 v2ra17,LOC107568349,LOC107568268,LOC107703349,LOC107695207,LOC107722082,LOC105904790,LOC107695201 other upstream 298753 5623453 ~ 5629653 (+)
LOC122323196 v2ra17,v2ra16,LOC107695207,LOC107568277,LOC107716837,LOC107695208,LOC107568268,LOC107568349 other upstream 303429 5619470 ~ 5624977 (+)
LOC122363125 LOC107702192,LOC107742943,LOC107564270,LOC107557162,LOC107702193,LOC107742944,LOC107748627,LOC107671076,LOC107748628,LOC107564269,LOC107702194,LOC107671077,LOC107557163 other upstream 432613 5492237 ~ 5495793 (+)
G124598 NA other upstream 533094 5394895 ~ 5395312 (+)
G124580 NA other upstream 698460 5228563 ~ 5229946 (+)
G124661 NA other downstream 43892 5976210 ~ 5979282 (+)
LOC122362599 LOC107557170,LOC107748085,LOC107741383,LOC107569151,LOC107741381,LOC107697634,LOC107697635,LOC107568278,LOC107712093,LOC107671063,LOC107569152 other downstream 88231 6020549 ~ 6029121 (+)
G124707 NA other downstream 359173 6291491 ~ 6291925 (+)
G124727 LOC107750410,LOC107695433,LOC107548924,LOC107739781,LOC107739761,LOC107564274,LOC107702188,LOC107728083,LOC107739792 other downstream 606929 6539247 ~ 6540907 (+)
G124881 LOC102215562 other downstream 1094000 7026318 ~ 7027135 (+)

Expression


Co-expression Network