LOC122362557


Basic Information

Item Value
gene id LOC122362557
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 10148075 ~ 10160926 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043264075.1
CAGTCGATGACTTTCTAAAGACAATATACTCACCCGATTCCACTGCAATATACTTTCCATGCTCATCTGTGCAcctacttcctgtctgagtcTGCTTCCGTTACAAAGtgctctctcctctcctcagCTGCAATGAAGACCATTGTGCTCATTCTACTGCTTGTGGCTTTCAGCTCAGGTGATAAAATCATTGGAGGTTATGAATGTCGGCCGCACTCTCAGCCCTGGCAAGTGTACCTCAGCGATAATAGATTCTCATGTGGAGGATCATTGATTAATGAAAGATGGGTTATGTCTGCTGCTCACTGCACATTCATaaaaaacgaTCTCCTCATCCGCCTGGGAACCCATAACTTGCGTGCTACTGAAAGCACAGAGCAGAGGATCAGAGCAGAGAAGATCATCCCTTTCCCAAAATACAATAATCGGCCTCATAATAATGATATCACGCTGATCAAGCTGAGAAATCCTGCCACCCTCAACAATTATGTGAGGCCAATCCCTCTGCCAAACAACTGCACCTCTGCAGGGGAGCAGTGCTTGGTTTCTGGATGGGGCAGAACTGAAGCTGGCCCTGCTTCTGCCCTGCAGTGTTTGGATTTGCCTGTAATCTCAAACAAGCTTTGTAAGCGTGCTTATGGTCCattaataactaaaaacatGTTCTGTGCTGGATTCATGCAGGGAGAGAAAGACTCGTGCCAGGGGGATTCTGGTGGCCCTGTAGTGTGCGGCGGGAAACTGAAAGGTGTTGTTTCCTTTGGCGAGGGCTGTGCTAAACCGGATTTTCCTGGGGTTTATGTTGAGGTGTGCCGCTACACGAAATGGATCAATTCCATTATAGCGAAAAACTAACTGTTTATTTAGTCTGGTTGGCCCTTTACAAGTTATATCTGTAATTAAGTCAAAGTCCCTTTAAAAGTCAtccaaatttttaaaaagcctcTCAGACAGCTGTTTCAGTCATGCACGTACAGCtatttaaaagaagaaacattAAATTCTATAGCAACCAGAGATATCCACCttcctttttctatttttcttttgtatttcctCCCATTCACAAGTAATTTGAgtgcaaaatatttgtatatcttaatctttgaattaaattcatcttaaaatta
>XM_043264076.1
TGCTATTCCTGAACTTTGCAGAAGtgctctctcctctcctcagCTGCAATGAAGACCATTGTGCTCATTCTACTGCTTGTGGCTTTCAGCTCAGGTGATAAAATCATTGGAGGTTATGAATGTCGGCCGCACTCTCAGCCCTGGCAAGTGTACCTCAGCGATAATAGATTCTCATGTGGAGGATCATTGATTAATGAAAGATGGGTTATGTCTGCTGCTCACTGCACATTCATaaaaaacgaTCTCCTCATCCGCCTGGGAACCCATAACTTGCGTGCTACTGAAAGCACAGAGCAGAGGATCAGAGCAGAGAAGATCATCCCTTTCCCAAAATACAATAATCGGCCTCATAATAATGATATCACGCTGATCAAGCTGAGAAATCCTGCCACCCTCAACAATTATGTGAGGCCAATCCCTCTGCCAAACAACTGCACCTCTGCAGGGGAGCAGTGCTTGGTTTCTGGATGGGGCAGAACTGAAGCTGGCCCTGCTTCTGCCCTGCAGTGTTTGGATTTGCCTGTAATCTCAAACAAGCTTTGTAAGCGTGCTTATGGTCCattaataactaaaaacatGTTCTGTGCTGGATTCATGCAGGGAGAGAAAGACTCGTGCCAGGGGGATTCTGGTGGCCCTGTAGTGTGCGGCGGGAAACTGAAAGGTGTTGTTTCCTTTGGCGAGGGCTGTGCTAAACCGGATTTTCCTGGGGTTTATGTTGAGGTGTGCCGCTACACGAAATGGATCAATTCCATTATAGCGAAAAACTAACTGTTTATTTAGTCTGGTTGGCCCTTTACAAGTTATATCTGTAATTAAGTCAAAGTCCCTTTAAAAGTCAtccaaatttttaaaaagcctcTCAGACAGCTGTTTCAGTCATGCACGTACAGCtatttaaaagaagaaacattAAATTCTATAGCAACCAGAGATATCCACCttcctttttctatttttcttttgtatttcctCCCATTCACAAGTAATTTGAgtgcaaaatatttgtatatcttaatctttgaattaaattcatcttaaaatta

Function

GO:

id name namespace
GO:0008236 serine-type peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043264075.1 True 1130 mRNA 0.43 6 10148075 10160926
XM_043264076.1 False 1046 mRNA 0.43 5 10159276 10160926

Neighbor

gene id symbol gene type direction distance location
LOC122363015 myo5a,myo5aa,LOC107746947,LOC107712751 coding upstream 346504 9751257 ~ 9801571 (+)
arpp19a arpp19a,LOC107704273,LOC107676482,LOC107712699,LOC107550627,LOC107588548,LOC108413875 coding upstream 398292 9744904 ~ 9749783 (+)
fam214a fam214a,LOC107676484,LOC107704272,LOC107550636,LOC107588549 coding upstream 408669 9709204 ~ 9739406 (+)
onecut1 onecut1,LOC107746960,LOC107676486,LOC107712763,LOC107704258 coding upstream 445929 9696223 ~ 9702146 (+)
iqcg iqcg coding upstream 583828 9555052 ~ 9564247 (+)
LOC122362596 NA coding downstream 29844 10190770 ~ 10193160 (+)
gnb5b gnb5,gnb5b,LOC107700591,LOC107588534,LOC107704270 coding downstream 35878 10196804 ~ 10209150 (+)
bcl2l10 bcl2l10,LOC107747612,LOC107700593,LOC107588535,LOC107704269 coding downstream 48427 10209353 ~ 10214486 (+)
tmod2 tmod2,tmod3,LOC107700589,LOC107746940,LOC107747615,LOC107704266,LOC107550632,LOC108440576,LOC108264495 coding downstream 136571 10297497 ~ 10320648 (+)
lysmd2 lysmd2,LOC107746939,LOC107747616,LOC107704265,LOC107588532,LOC107700588,LOC107550629 coding downstream 168016 10328942 ~ 10335753 (+)
LOC122323099 NA non-coding upstream 12987 10133971 ~ 10135088 (+)
G125254 NA non-coding upstream 85295 10057741 ~ 10062780 (+)
G125253 NA non-coding upstream 93018 10054812 ~ 10055057 (+)
G125240 NA non-coding upstream 110147 9802919 ~ 10037928 (+)
G125243 NA non-coding upstream 359972 9786260 ~ 9788103 (+)
G125341 mapk6,LOC107550634,LOC107704268,LOC107747613,LOC107588533,LOC107700590 non-coding downstream 87214 10248140 ~ 10249308 (+)
G125344 NA non-coding downstream 123712 10284638 ~ 10288340 (+)
G125347 NA non-coding downstream 125801 10286727 ~ 10341585 (+)
G125352 NA non-coding downstream 180841 10341767 ~ 10343454 (+)
G125353 LOC107700587,LOC107746952,LOC107588544,LOC107588531,LOC107747623,LOC107704264 non-coding downstream 183843 10344769 ~ 10348696 (+)
G125192 NA other upstream 782587 9359436 ~ 9365488 (+)
LOC122362511 cmc2,LOC107711752 other upstream 1600352 8544699 ~ 8547723 (+)
G125041 atmin,LOC107719888,LOC107711756,LOC107567294,LOC107667974 other upstream 1611127 8176353 ~ 8536948 (+)
si:ch73-103b9.2 LOC107675000,LOC107667976,LOC107719884,LOC107711755,LOC107567296,LOC101883751 other upstream 1616003 8168865 ~ 8532072 (+)
gldn gldn,dmxl2,LOC107588556,LOC107700585,LOC107550630,LOC107704260,LOC107700583,LOC107746935,LOC107704254,LOC107550623 other downstream 255087 10416013 ~ 10425840 (+)
sema6dl sema6dl,sema6d,LOC107588527,LOC107683673,LOC107557846,LOC107692740 other downstream 471551 10632477 ~ 10718085 (+)
G125461 ugt5c1,LOC107692742,LOC107738533 other downstream 664048 10824974 ~ 10837276 (+)
G125496 snrpd2,LOC106612977 other downstream 807159 10968085 ~ 10969767 (+)
ccnl1a ccnl1a,LOC107710830,LOC107563513,LOC107684610,LOC107691967,LOC107557837 other downstream 1065187 11226113 ~ 11233814 (+)

Expression


Co-expression Network