LOC122363106 (olfcg4,LOC107751720,LOC107663261,LOC107572100,LOC107662185,LOC107728083,LOC107680406,LOC107564274,LOC107702188)


Basic Information

Item Value
gene id LOC122363106
gene name olfcg4,LOC107751720,LOC107663261,LOC107572100,LOC107662185,LOC107728083,LOC107680406,LOC107564274,LOC107702188
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056716.1
NCBI id CM032085.1
chromosome length 26409628
location 5314922 ~ 5318185 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043265035.1
TGGAGTTCAATCTTTGGGatgcttctctttttttacaCAATCCTGCTTTTACATCAGCTTCATACAAAGGCAGGAAACACACTATGCCGAATGATGGGAGACCCTAAGTACCCGCTGATTTCTAAGAATGGAGACCTAACCATTGGAGCACTTTTTCCAGTCCATAGCACAGAGACAGTACCTTCATTcgaatttagaaaaaaacctCAGCCTCTTTCATGCTCCAGtGTGAATCTAAGAGATTTTCGCCTTGCccaaattatgatttttgccatTGAAGAGATTAACAGAAGTGAACATTTGCTCCCAAATGTTTCTATTGGTTATCGAATTTTTGACACCTGTGGTTCAAGACTATCTACCATGAGTGCAATAATGGGACTGATGAATGTTCAGGAGTTTGAAGAAGAAGACAGTTGTACTGGGCAGTCTCCATTGCATGCTATAATAGGTGATTCAGAGTCTACTGCCACAGTGATTCTCTCCAGAACTACAGGACCTTTTAAGATACCGGTGataagTCATTCAGCTTCATGTGAATGCCTCGGCAATAGAAAAGATTACCCTTCATTCTTTAGGACTACAGCTAGTGATTACCACCAGAGCAGAGCACTTGCATACTTGGTCAAGGATTTAGGATGGTCTTGGGTTGGAGCTGTGAACAGTGACAATGAATATGGAAACTATGGAATGgcaatatttcagaaaatagcCCGGGAGGAGGGGATCTGCGTGGAGTACACAGTCAAATTCTATCGAACAGAAACTGAAAAATTACAGAAAGTGgtagaaagaattaaaaaaagcactgcAAAAGTGGttattgcatttgtttcatttcttgaGATGGGTTTACTCATTGATCAGCTaagtattcaaaatattacaggCATTCAAATGATTGGAGTAAAGTCATGGATAACATCAGAAAATTACATCACTCTAAACAGCTTTCATGTTCTAGGAGGGTCGCTGGGGTTTGCAATGAGAAAAATCAATATTGAAGGGTTTTCAGATTATGTTACAAAATCATTCTGGAAAACTGCCATCCCGTGCCTACACTTTGAGGGGAATTCTTCTCAATATGCAATAAGTTGCAGAAAATATGATGATCTACTTacaatgaaaaattacaatgaagATGTGACTGAACACAGATATTCAGCCAATGTCTATGAAGCAGTTTATGCTGTGGCTCATTCACTACACAGTCTTCTCAACTGCAAAGCACAAGAAGGTTGTGAAAAAGGCCTGACAATACAGCCACAGCagGTGGTCGAGGCtctgaaaaaagtaaatttcACCGTTAAGTTTGGTGATCGTGTGTGGTTTGACAGCAGTGGTGCAACAGTGGCCCAATATGAAGTTGTAAACTGGCAGCAGAACTCAGATGGATCATTCCAGTTTAGGCCGGTGGGATACTATGATGCCTCTTTGCCACCTGATCAACGTTTTGTgctcaaaactgaaaacataatcTGGGCTGGAGGAAAATTGCAAAAGCCAAGGTCTGTGTGCAGTGAGAGCTGTCCTCCAGGCACTAGGAAGGCTACACAGAAAGGAAGACCTGTCTGCTGTTATGACTGTATTCCATgtgcagaaggagaaatcagtaaTGAGACAGATTCAATTAACTGCAAGCAGTGTCCAGGGGAATTCTGGTCTAatgctgagaaaaataaatgtgtgctaaAGGCTGTAGAGTTTCTGTCATTCACAGAAGTTATGGGTATAGTGCtaatatttttctcattatttggaGTAGGATTAACTGTGCTAGTGGCCTTTCTGTTTTACAGTAAGAAAGACACCCTAGTAAAAGCCAACAACTCAGAGCTGAGCTTCCTGCTGCTCTTCTCACTgactctgtgttttctctgttctcttacTTTCATTGGTCGGCCCACTGAGTGGTCCTGTATGTTGCGTCACACAGCATTTGGGATCACTTTTGTTCTCTGTATCTCCTGTGTTTTGGGGAAAACAATAGTGGTCTTAATGGCCTTCAAGGCTACACTTCCAGGAAGTAAtgtcatgaaatggtttggTCCTGCACAACAACGGCTCAGTGTTTTTGCCTTTACACTAATACAAATTCTTATATGTGTGCTTTGGTTGACAATATCTCCTCCATTTCCTAacgaaaatatgaaatattataaggAAAAGATCATACTTGAGTGCAGTCTAGGTTCAACTATAGGTTTCTGGGCTGTGCTGGGTTATATTGGCCTTTTGGCTGTCTTGTGCTTTTTTCTGGCTTTTCTGGCTCGCACACTGCCTGATAACTTCAATGAAGCCAAATTTATAACATTCAGCATGATAATATTTTGTGCTGTATGGATTACGTTTATTCCAGCTTATGTCAGTTCTCCTGGCAAATTTACCGTAGCTGTAGagatttttgctattttagcCTCAAGCATTGGTTTactattttgcatatttgcgcctaaatgttatattatcCTGTGTAAGCCTGAACAAAATACAAAGCAACATGTTATGGGAAAAACACCATCTAAAACCTATTGA

Function

symbol description
olfcg4 Predicted to enable G protein-coupled receptor activity. Predicted to act upstream of or within G protein-coupled receptor signaling pathway. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane.

NR:

description
PREDICTED: extracellular calcium-sensing receptor-like

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0005886 plasma membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043265035.1 True 2535 mRNA 0.40 7 5314922 5318185

Neighbor

gene id symbol gene type direction distance location
rpl4 rpl4,LOC107686296,LOC107596972,LOC107718306,LOC107583768,LOC107672218 coding upstream 571012 4740143 ~ 4743910 (+)
LOC122323236 NA coding upstream 572487 4742307 ~ 4742435 (+)
LOC122323242 NA coding upstream 573271 4741554 ~ 4741651 (+)
LOC122323241 NA coding upstream 573598 4741255 ~ 4741324 (+)
LOC122323235 NA coding upstream 573957 4740868 ~ 4740965 (+)
LOC122322945 LOC107674897 coding downstream 13018 5331203 ~ 5332855 (+)
LOC122322946 olfcg5,LOC107564274,LOC107702188,LOC107728083,LOC107680406,LOC107719307,LOC107569497,LOC107739792 coding downstream 28979 5347164 ~ 5350497 (+)
LOC122322947 LOC107564267,LOC107702191 coding downstream 51900 5370085 ~ 5381964 (+)
LOC122322926 LOC107742941,LOC107564271,LOC107557161,LOC107702193,LOC107742944,LOC107564269,LOC107557163,LOC107748628 coding downstream 66910 5385095 ~ 5389352 (+)
LOC122322940 LOC107742941,LOC107564271,LOC107557161,LOC107748627,LOC107557163,LOC107748628,LOC107702193,LOC107557162 coding downstream 88153 5406338 ~ 5409528 (+)
G124544 NA non-coding upstream 131385 5011405 ~ 5183537 (+)
G124547 NA non-coding upstream 257084 5056750 ~ 5057838 (+)
G124533 NA non-coding upstream 406753 4903768 ~ 4908169 (+)
G124506 NA non-coding upstream 558303 4756230 ~ 4756619 (+)
G124505 NA non-coding upstream 559736 4754738 ~ 4755186 (+)
G124595 NA non-coding downstream 36528 5354713 ~ 5354980 (+)
G124622 v2rx1,LOC107703364,LOC107568274,LOC107716020 non-coding downstream 341721 5659906 ~ 5660233 (+)
G124672 NA non-coding downstream 703056 6021241 ~ 6021636 (+)
G124673 NA non-coding downstream 705474 6023659 ~ 6023991 (+)
G124703 NA non-coding downstream 909296 6227481 ~ 6230584 (+)
G124580 NA other upstream 84976 5228563 ~ 5229946 (+)
G124577 NA other upstream 88865 5225808 ~ 5226057 (+)
G124553 NA other upstream 174251 5139490 ~ 5140671 (+)
G124548 NA other upstream 204289 5071645 ~ 5110633 (+)
LOC122322928 megf11,LOC107596974,LOC107686294,LOC107672222 other upstream 519086 4759628 ~ 4795836 (+)
G124598 NA other downstream 76710 5394895 ~ 5395312 (+)
LOC122363125 LOC107702192,LOC107742943,LOC107564270,LOC107557162,LOC107702193,LOC107742944,LOC107748627,LOC107671076,LOC107748628,LOC107564269,LOC107702194,LOC107671077,LOC107557163 other downstream 174052 5492237 ~ 5495793 (+)
LOC122323196 v2ra17,v2ra16,LOC107695207,LOC107568277,LOC107716837,LOC107695208,LOC107568268,LOC107568349 other downstream 301285 5619470 ~ 5624977 (+)
G124612 v2ra17,LOC107568349,LOC107568268,LOC107703349,LOC107695207,LOC107722082,LOC105904790,LOC107695201 other downstream 305268 5623453 ~ 5629653 (+)
G124661 NA other downstream 658025 5976210 ~ 5979282 (+)

Expression


Co-expression Network