aven (aven,LOC107549092,LOC107756595,LOC107671777,LOC107601941)


Basic Information

Item Value
gene id aven
gene name aven,LOC107549092,LOC107756595,LOC107671777,LOC107601941
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 15169355 ~ 15190219 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU204762
aaataattaaatctaagcTTCCTGGAAGTGTCAAAGCAAAATGAATACATTAGCTGCTCACTCAACGTatgtattttgatatattaattttatttttagatatatttttaaaggttttttttatttatttatttatttatgattttttttttttttttaatgtattacctgttttttaatttttaatgtattatctgtTTCAGGGGACTCATTTACACAGTTCAGATTCTCTGATGAGAAGGACTGGGAAATGGACTCCCTAGCAAAAAATCAGGTGCATGAGTTATTCCACAAGTTATTAAGTATTATAACTGACCTGCGTGTTTTGCACTGTAATAATTGATATCCTGTTGTTTGAGGAAGTATGTTCTCATGGTTAATTGTAATTTCTTCAGATTCCAGCTCTGTTTATAGACCTGCCGGCTTTAACTCAGACACTTCAAGAGCTTCCACTGCACACAAGACTGAACCTGGAGGCTGAGCTTGTGCAGGTGACGACTCCAATTGAACTTCCGTCTGTGACAGCGCCTCACAGGACTGACTCGACTCTAACAGCTGGATTGAAAGCTCCTCAGACAGGTGTAAAACCTGTTCCAGGTACCACAGCATCTCCCAGCGTCTCCACAGCTGTCCCTCCAGCCACAGATGATGCTGACCAGGAGCTCGACCTTCTCCTCAACTTGCAGAAACCCATCACAGAAATTGCTTCAGTCGAATCCCATGATGCAACAGACCATGTATTAAACGGCTCAACACAAGGTCCaggagaagagagaaaagaTCAAATGGTTGATATGAAAGAGACGAAGCCAGAAGTGGAAAGTGAAGCTAAACCTAcgagacaggaagtgacagaAGAGGATCTGGAGGACTGGTTGGACAGCATGATCTCCTGATCCCAGAGAAACTGACTGACACTGCTGTGGATTAAATCAGCACACGCAGCTTTGCTAATGCTGACATAGCATTACTTGTGTGCGGACGTGAACATCACACCGCGACACTTCATTAAGTCTTTTGATAGCCAAGACTAATTCAGTCATGTGGAATATGAAACGCTTCATCAATGTATTACTCAtaaaagtgatgtaatgctgtgCAACAGTTTACAGACCCATCATATTCTCACCCATCACTCGACGCTGATTAAAAGCAGCTATGACCAGCTTGGATTTATTGCATTAGctactttattttcattccCCCTgctcaaaacaaatgcaaatcacCAAAGCTACTAcctacatacatacaaatgGCCATACAATAGCAGTTTAGTGTATTAACTTCTgtttaataaacagtaaatgtttttgtcctcGAATGTAGATTCCTATTGTTTTGCAATCGTACTTCGTCAATGATCAGGCAGACAagatttcagttatttaaccttgaccaaacattaaaaaagcagtGTAATCTTTGCTCATGAACAAACGTCAACTAAAGCTACAAAACTACTAACCCAGGTGAGACGGTCTAAACTAAACTGCAGATAGCAAAACATACGAGCAGGAACAAAATGTTTGCATAGTCTCTTGTCGTAAGGCACTTTTTCAGTATGAGAAACAGCTAGTGGATTGAAGCAGATGATCGTTATATTTCTCATTCCACCAGTCAGGTTACCGTCCTTAAACGCATTGCACATTCTTcatagtcttttttttgtttttaaatcaaacaggCAGAAACTGTGTTTGGCACTCACTGAATACTAAGAAGGTATTCTTGTGCATATTTGTGTAGACGTTCATTCAacatcaaaaacatacatatgtCAACATCTCACaagtttgtgtgcatttgtgagTTAAGCAAATGAGGCATTTTcccatgtgtttttctttttatcaaacATGGCTTTGTGTCTTGATTTGGCAATGTGTGCtacatgttgtgttttttttgtttgtttgtttttttttttagttttttttaaa
>XM_043219959.1
ATGTCTAATTATAAAAGCTTTTTacctgatttatttttgtaaagtgtCAATCAATACGTCACTCAAAGTGTTCAAAACACAATTGccttttacattaattttttcattcattatgaAGGCATTGGCATCTCACACGCCCCGCACCTCGCTGCTTCTACTGCTTTTAATACTACTCACACCCATACTGTTTTCCCTCGGTTTGACTAGATTAAACTTTGATGCACATTTGTCAATTAATAAACTCATTTGTCAATTAATAAACTTTATCACATTATGCGGAACTAGTTGAACGGGCGGAACGTTTCCCCGTTGAAGAGGGTTCTCTTTTAAGTGTAACAACGGTTGTGGTGTTACACGATTACAGTCTCGGCATTAGTTCTGTACATGTTGAGTTATGGAAGGCAGACACAGTCGGGGACGCGGTGGGCATTGGAAaagaggaggtggaggtggaagTGGAGGTGATGCTGAGGCCGGCAGTTCGGGAGAGCACCGAGGTCGCGGAAGAGGAGGCCAGTATCATCGTGGAAGAGGAAAACGGGATCATCGTAGAGGAAGAGGGCGAGCGTTTGGACCTCCTGCTGATTTTAGACGAgTCGCTTTCCAGAATCAAGATGACAGTGACGACAAAGAAAACTTTGAGCAAGCGGAGGAGGACAACACCTTCTCTAGACGAAAGCTTGAGTCCAATTGGAACCGTTATGAGGAATCCGAGAAAGAAGAAATGAATGAAGATGTTCCCGCACAGAGAGGCACAGAGTATCATGTCCTCCTCAGTTCGGCTGGGGACTCATTTACACAGTTCAGATTCTCTGATGAGAAGGACTGGGAAATGGACTCCCTAGCAAAAAATCAGATTCCAGCTCTGTTTATAGACCTGCCGGCTTTAACTCAGACACTTCAAGAGCTTCCACTGCACACAAGACTGAACCTGGAGGCTGAGCTTGTGCAGGTGACGACTCCAATTGAACTTCCGTCTGTGACAGCGCCTCACAGGACTGACTCGACTCTAACAGCTGGATTGAAAGCTCCTCAGACAGGTGTAAAACCTGTTCCAGGTACCACAGCATCTCCCAGCGTCTCCACAGCTGTCCCTCCAGCCACAGATGATGCTGACCAGGAGCTCGACCTTCTCCTCAACTTGCAGAAACCCATCACAGAAATTGCTTCAGTCGAATCCCATGATGCAACAGACCATGTATTAAACGGCTCAACACAAGGTCCaggagaagagagaaaagaTCAAATGGTTGATATGAAAGAGACGAAGCCAGAAGTGGAAAGTGAAGCTAAACCTAcgagacaggaagtgacagaAGAGGATCTGGAGGACTGGTTGGACAGCATGATCTCCTGATCCCAGAGAAACTGACTGACACTGCTGTGGATTAAATCAGCACACGCAGCTTTGCTAATGCTGACATAGCATTACTTGTGTGCGGACGTGAACATCACACCGCGACACTTCATTAAGTCTTTTGATAGCCAAGACTAATTCAGTCATGTGGAATATGAAACGCTTCATCAATGTATTACTCAtaaaagtgatgtaatgctgtgCAACAGTTTACAGACCCATCATATTCTCACCCATCACTCGACGCTGATTAAAAGCAGCTATGACCAGCTTGGATTTATTGCATTAGctactttattttcattccCCCTgctcaaaacaaatgcaaatcacCAAAGCTACTAcctacatacatacaaatgGCCATACAATAGCAGTTTAGTGTATTAACTTCTgtttaataaacagtaaatgtttttgtcctcGAATGTAGATTCCTATTGTTTTGCAATCGTACTTCGTCAATGATCAGGCAGACAagatttcagttatttaaccttgaccaaacattaaaaaagcagtGTAATCTTTGCTCATGAACAAACGTCAACTAAAGCTACAAAAC

Function

symbol description
aven Predicted to be involved in negative regulation of G2/M transition of mitotic cell cycle. Orthologous to human AVEN (apoptosis and caspase activation inhibitor).

NR:

description
cell death regulator Aven

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU204762 True 1943 lncRNA 0.38 4 15182802 15190219
XM_043219959.1 False 1922 mRNA 0.44 6 15169355 15186000

Neighbor

gene id symbol gene type direction distance location
emc7b emc7,LOC107721381,LOC107549094,LOC107671783,LOC107756596,LOC107668257,LOC107601948 coding upstream 3445 15163524 ~ 15165910 (+)
katnbl1 LOC107668266,LOC107721278,LOC107671774,LOC107756597,LOC107601956 coding upstream 6437 15158987 ~ 15162918 (+)
gpr176 LOC107671784,LOC107721385,LOC107602001,LOC107668268,LOC107549088 coding upstream 117217 15043439 ~ 15052138 (+)
acot20 si:dkey-11e23.4,LOC107668224,LOC107756598 coding upstream 127471 15037737 ~ 15041884 (+)
fntb fntb,LOC107721314,LOC107671778,LOC107756604,LOC107668263,LOC108424508,LOC108257588,LOC106571088 coding upstream 173131 14985633 ~ 14996224 (+)
fmn1 fmn1,LOC107721260,LOC107549073,LOC107601882,LOC107756565 coding downstream 70208 15260427 ~ 15276678 (+)
ywhaqa ywhaq,ywhaqa,LOC107549101,LOC107721301,LOC107756586,LOC107668239 coding downstream 132494 15322713 ~ 15332877 (+)
adam17b adam17,LOC107549102,LOC107756583,LOC107668236,LOC107693239,LOC107601850 coding downstream 143287 15333506 ~ 15341938 (+)
asap2b asap2,asap2b,LOC107693238,LOC107601837,LOC107756582,LOC107668233 coding downstream 159478 15349697 ~ 15365361 (+)
mboat2b mboat2b,mboat2,LOC107668249,LOC107693237,LOC107601827,LOC107756580,LOC107549076,LOC108257786,LOC108410960 coding downstream 180374 15370593 ~ 15392335 (+)
LOC122325557 NA non-coding upstream 92694 15057216 ~ 15076661 (+)
G138675 NA non-coding upstream 189678 14976262 ~ 14979677 (+)
LOC122324711 NA non-coding upstream 264844 14903324 ~ 14904511 (+)
G138606 NA non-coding upstream 374551 14794594 ~ 14794804 (+)
G138605 NA non-coding upstream 376423 14792621 ~ 14792932 (+)
G138726 NA non-coding downstream 68776 15258995 ~ 15278536 (+)
G138732 NA non-coding downstream 101267 15291486 ~ 15292209 (+)
G138743 LOC107693241,LOC107721299,LOC107549105,LOC107756581,LOC107668234,LOC107580993 non-coding downstream 177972 15368191 ~ 15368542 (+)
G138763 NA non-coding downstream 247229 15437448 ~ 15437736 (+)
LOC122325432 NA non-coding downstream 401921 15592140 ~ 15594172 (+)
slc10a1 slc10a1,LOC107668231,LOC107671779,LOC107756602,LOC107721315 other upstream 153983 15003410 ~ 15015372 (+)
LOC122324585 kif26aa,LOC107721264,LOC107602192,LOC107711661,LOC107668200,LOC107569886,LOC107659150 other upstream 899017 14210022 ~ 14270338 (+)
prima1 si:dkey-85n7.6,LOC107602279,LOC107659191,LOC107583807,LOC108424448,LOC103041400 other upstream 1021442 14126015 ~ 14147913 (+)
si:dkey-85n7.8 si:dkey-85n7.8,LOC107602311 other upstream 1059751 14108293 ~ 14109604 (+)
tmem251 tmem251 other upstream 1114522 14051969 ~ 14054833 (+)
LOC122325444 rps7,LOC107668222 other downstream 531642 15721861 ~ 15922280 (+)
G138869 LOC107732629,LOC107726464,LOC107693230,LOC107549112,LOC107601686 other downstream 572895 15763114 ~ 15797028 (+)
henmt1 henmt1,LOC107710559,LOC107698398,LOC107555628,LOC107601273,LOC107726462 other downstream 2306676 17496895 ~ 17502015 (+)
ivns1abpa ivns1abpa,LOC107732388,LOC107726450,LOC107553504,LOC107599089,LOC107696153 other downstream 2599075 17789294 ~ 17802450 (+)
il17a/f3 stmn4,LOC107698329,LOC107553446,LOC107732387,LOC107719388,LOC103148820,LOC106907996,LOC106571034,LOC106608277 other downstream 2838911 18029130 ~ 18034178 (+)

Expression


Co-expression Network