nfkbie (LOC107568226,LOC107704051,LOC107559117,LOC107669434,LOC107726706,LOC107732488)


Basic Information

Item Value
gene id nfkbie
gene name LOC107568226,LOC107704051,LOC107559117,LOC107669434,LOC107726706,LOC107732488
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 24532504 ~ 24544049 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219086.1
ATGAGGAACAGGGCCGCGGTCGAGGTGTTTGAGGAGATTCCGCGGGGCTGCGTTCGGGTGGGATCGGTAACGGCACGGGTTTGCCACTCCCTGCGGGGAATTCCCACTTCAGCCGAATCGAAACGCCCCGCCTCCTCCCACGGCGCGCATTACCGCCAGCGCGCTCCGCGGCGCTTCCACTAACTTTAACCAGCTCGGCTCGCGCGCTTCGCTTTAACCCGGCGTTTGTTAAACTAGCAGCCGTCGTGGAGTACCCGAGGCGGGCGGCGGAGTCACCGGTGGTGGGATGAGAAACAAAAGCGGATGTCTCTGGTGTCATAATGTCACGGTGATTTCGCGCTCGTACCCCTCCACGTTCACGCACTGACTCGGGATGGCGCGAAGCGGCGGCGAGAAACAAGGCAAGCTCGATTTCGACGAGAGCCGGGTCGACTCCGGAATCGACTCGTACAAGTCCGTGTCCAGGGAAGCGGACGGCGGCTCGGACGGCGCCGAGGAGAAGAGCTGCGACGCGGGCGAGAGGCTGGACTCCGCGTACGTCTCGTCCTCGCTGACCGTGGACAGCTTGGGGGATTTTATCGAGAAATGCAGCGTTTCTGAATGTGAACGCGCGGCGGACTGTGCGTACACCGAAGAGGAAGTCGGTTTCCTAACCACCGTTACAGAAGATGGAGACACGATTCTCCACTTGGCCATAATCCACGAAGAGGAATATTTTGCACGCCAATTGATAGACCTGTTTCCTCCAGATCTGATGGATATTCAGAACAACCTGTATCAGACGCCGTTGCATCTGGCCACGTACTTGAACCAGCCCGGCATAGTGAAGGGCCTTGTAGAGAAGAGGGTCTCGCTGGAGCTCCAGGACCAGGAGGGAAACACCCCTCTCCATGTGGCGAGCGAGCACGGGTTCTGGGACTGTGCCAATGAGATGATCCACAGCGCCTCGCCCAGCAAACTCTCCAACGTGCTGGAAGCCCAGAACTGGAGAGGTCTGACTTGCCTCCACGTGGCTGCGCTGCACAAACATCACCGTCTCCTCCGGCTGCTGATGAAGAGCGGCGTGGATCTGAACGTCCAGGAGGGGACGAGCGGGAAGACGGCGCTGCACGTGGCCGTGGAGCTGCACGACGCGCCGGCGGTGAACCTGCTGCTCAACAAAGGGGCTAACGTCGACGCGGTGATGTTCAACGGCTGCACCGCGCTGCATCTGGCCGTGGGCCGCCAGGACGCCGCCATCGCCAACCTCCTGTGCCAGGCTGGGGCCGACAAGATGATCCGAAACATGGAGGACGAGACGGCCCTGGATCTAGCCGACGGCAACGATGACATTTTGGCTCTGTTCCCCTTCGACGACATTCAGATCATGGGCAGGACCGTCACGAACTTCTCCTGAGCCCGGCGGCGGCGCGTCCTCcgctttc

Function

NR:

description
NF-kappa-B inhibitor epsilon

GO: NA

KEGG:

id description
K05872 NFKBIE; NF-kappa-B inhibitor epsilon

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219086.1 True 1424 mRNA 0.61 6 24532504 24544049

Neighbor

gene id symbol gene type direction distance location
rbm25b rbm25,rbm25b,LOC107704053,LOC107669447,LOC107568207 coding downstream 21974 24492752 ~ 24510530 (-)
atp6v1d atp6v1d,LOC107568214,LOC107559096,LOC107669460,LOC107726702 coding downstream 47016 24482072 ~ 24485488 (-)
tmem121ab tmem121b,LOC107548420,LOC107704034,LOC107719437,LOC107669431,LOC107559097,LOC108257619 coding downstream 473667 24014150 ~ 24058837 (-)
serinc1 serinc1,LOC107675227,LOC107727646,LOC107675084,LOC107602188,LOC107598085 coding downstream 580070 23946175 ~ 23952434 (-)
gja12.2 cx28.1,LOC107727590,LOC107675221,LOC107717169,LOC107598107,LOC107697092 coding downstream 692481 23836485 ~ 23840023 (-)
tcte1 tcte1,LOC107732501,LOC107669456,LOC107726700,LOC107559077 coding upstream 11699 24555748 ~ 24569128 (-)
rnf8 rnf8,LOC107704050,LOC107732490,LOC107726708,LOC107669457,LOC107559076 coding upstream 31299 24575348 ~ 24582578 (-)
LOC122325099 LOC107732491,LOC107704049,LOC107559114,LOC107568220,LOC100536673,LOC107726709,LOC107669415 coding upstream 39735 24583784 ~ 24587254 (-)
disp1 disp1,LOC107732496,LOC107704044,LOC107568221 coding upstream 76409 24620458 ~ 24673062 (-)
LOC122324925 LOC107559109,LOC107669446,LOC100330838,LOC107704031,LOC107568211,LOC107732492 coding upstream 130161 24674210 ~ 24677624 (-)
G141622 NA non-coding downstream 8673 24522383 ~ 24523831 (-)
G141634 NA non-coding downstream 10293 24521977 ~ 24522211 (-)
G141627 gphn non-coding downstream 88314 24440791 ~ 24444190 (-)
LOC122325262 NA non-coding downstream 173666 24356942 ~ 24358838 (-)
G141625 NA non-coding downstream 338838 24192973 ~ 24193666 (-)
G141624 NA non-coding upstream 967 24545016 ~ 24545549 (-)
LOC122325459 tlr5b,tlr5a,LOC107712572,LOC107669417,LOC107559111 non-coding upstream 67817 24611866 ~ 24616647 (-)
G141662 NA non-coding upstream 147953 24692002 ~ 24692486 (-)
G141648 NA non-coding upstream 180893 24724942 ~ 24726684 (-)
G141650 NA non-coding upstream 183012 24727061 ~ 24727733 (-)
slc35b2 slc35b2,LOC107704052,LOC107568229,LOC107559116,LOC107669435 other downstream 141 24524069 ~ 24532363 (-)
LOC122324315 rbm25,rbm25b,hsp90ab1,LOC107704053,LOC107669447,LOC107732485,LOC107732486,LOC107568216,LOC107704054 other downstream 14761 24254393 ~ 24517743 (-)
G141502 NA other downstream 525839 24004687 ~ 24006665 (-)
tbc1d32 tbc1d32,LOC107602184,LOC107727650,LOC107675228,LOC107716900,LOC107697130 other downstream 709454 23785752 ~ 23823050 (-)
mcm9 mcm9,LOC107678857,LOC107549683,LOC107743310,LOC107697136,LOC107727573,LOC107603056 other downstream 1131113 23384571 ~ 23401391 (-)
G141651 NA other upstream 27364 24571413 ~ 24647421 (-)
rhpn1 rhpn1,LOC107704026,LOC107669421 other upstream 294603 24838652 ~ 24851779 (-)
mettl24 LOC107738893 other upstream 750795 25294844 ~ 25408775 (-)
wasf1 wasf1,LOC107661360,LOC107556997,LOC107564591,LOC107739187,LOC107667835 other upstream 782459 25326508 ~ 25377416 (-)
G142058 NA other upstream 1104443 25648492 ~ 25650093 (-)

Expression


Co-expression Network