mettl24 (LOC107738893)


Basic Information

Item Value
gene id mettl24
gene name LOC107738893
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 25294844 ~ 25408775 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU209680
GAAGGAGAAGATGTCTACCAGCGCTCGGCTGACTTTCTGAAGGCATGCGGACGGAGAGAAGAAGCACGGAAGTCAACAAAACCAACACGGAGAGCAGAAGATCGAGGAGCGCTGCGTGAAAGAGcgtgtgtgtgtgtgtgtgtgtgtcgcgtCACACACAGATGGAAGGCTGAGATGAGCCGTCTGCGCAGCTGCAGGACGAGGACGAGTGTGTGCGGCCTGCTGCTGTCGCTCATCTGCGTCTGCGCTCACGTCTACGTGCTGCGTCTGCACAAACACGGCCAGCGGCGCAGGACCGTCGCCACGGCAACAGATGCTGGGTCCACCTGCTGCTCGGCGCTGAAGCATCCCAGACGGATCTCTAGATGGAAGATCTCTCTGGAGCCGTGGGCCGCTGAGACTCGAGGTTTCCAGGAGGAGGCGGATCGGTTCCTCAGATACATCTCCACTCCGCAGctgtcCTGCCGGAGACCCGAGTCTGTGCCGCCCGTCTCTGACGCAGAGCATCATGGGTCGTGGGTGCTGTGTTTAGACCCCAGGTTTAGTCTGGCGCAGCGGATCTTGTCCAAACACTGCCGAGTCTATTCGCTCAGGCTGGGAGCGGAGGACGATGCTCTGGAGCGGTCTCTGTCCGTCTCTGGCTGTGAGGTTCACTGTTTTGACCCCAGCATCAGACGAGCTCACCTGCAGGATCATAACATGTGGCTCCACCGGCTCTCTGTGGACTGGAGGGACCCCAACCCCGCCGTCCCCGTCCAGAGACTCCACAGGGGCTCCAAGAAGCTCTCCGCCATCCTCAGACACTTCGGACACACACAGCTGGACGTGCTGAAGGTGGACCTGGAGAGCGCCGAGTGGAAGATCCTGGAGAACCTGGTCCTGGAGCAGGTG
>TU209686
GGAAATAAAAGGGAGACATTTATTATCCtcaaaaagacagaaatgcGTGACACTGGAGATACAGATTCAttcattataaaacaacaaGCAGGAGCTGCAGTCTCTgacgcgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgactggaTACCAGTATATTAatcctcctcctcgtcctcctcctcagTCCCAGAGCTTGATCTGACCGTCCCAGCCGCAGGTGATCACCTTGGACGTCTCGTGAGGATGCCAGAGAGCGCTGATGCAGACCTTGTCGTGGGCCTTGATCCGATGATAGAGCTTGGTCGTCTTCCAGTCCCAGATGTTCAGCTTCCCGTCAGCGTCGCCCGAAACCACGTTTATAATTCATCTACGACGAGCAAACGCCTCCAAACTGGAGCAGAACACGGAAACCTGAAGCCCGCGATACGGGACCAGAACAAGCCCCGGAGACAACAGAGCGGCCAGAAATAACCGACCGGACACCAGAACCAGAGCAAGACAACCTCTCAAACCTGAGCAAGAAAACTAGAGCAACCTCAGCGTTCGTTTGGGAGGAACACGTCACATTAACATGGACCAAACGTCGCTAAACTTCACTTGTAGCAAGTTCAATATACAGTAATCAACTTtagcactctctattctaattctatttaaTCTATTTACAGACTTGACCCTCAAACACTCTCCACTCTGTTTGTTTCCTTAATAAAAAGCATGTTATCGCTCTC
>TU209688
GGAAATAAAAGGGAGACATTTATTATCCtcaaaaagacagaaatgcGTGACACTGGAGATACAGATTCAttcattataaaacaacaaGCAGGAGCTGCAGTCTCTgacgcgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagtgtgtgtgtgtgtgtgtgtgagtgtgagagtgtgtgtgagagagtgtgtgtgagtctgtgtgtgtgtgtgagagagtgtgtgtgtgtgtgtgtg
>TU209689
GAAGGAGAAGATGTCTACCAGCGCTCGGCTGACTTTCTGAAGGCATGCGGACGGAGAGAAGAAGCACGGAAGTCAACAAAACCAACACGGAGAGCAGAAGATCGAGGAGCGCTGCGTGAAAGAGCTTTTCTTACCACACTGCTGTCTGaacacagcgtgtgtgtgtgtgtgtgtgtgtcgcgtCACACACAGATGGAAGGCTGAGATGAGCCGTCTGCGCAGCTGCAGGACGAGGACGAGTGTGTGCGGCCTGCTGCTGTCGCTCATCTGCGTCTGCGCTCACGTCTACGTGCTGCGTCTGCACAAACACGGCCAGCGGCGCAGGACCGTCGCCACGGCAACAGATGCTGGGTCCACCTGCTGCTCGGCGCTGAAGCATCCCAGACGGATCTCTAGATGGAAGATCTCTCTGGAGCCGTGGGCCGCTGAGACTCGAGGTTTCCAGGAGGAGGCGGATCGGTTCCTCAGATACATCTCCACTCCGCAGGCTGGGAGCGGAGGACGATGCTCTGGAGCGGTCTCTGTCCGTCTCTGGCTGTGAGGTTCACTGTTTTGACCCCAGCATCAGACGAGCTCACCTGCAGGATCATAACATGTGGCTCCACCGGCTCTCTGTGGACTGGAGGGACCCCAACCCCGCCGTCCCCGTCCAGAGACTCCACAGGGGCTCCAAGAAGCTCTCCGCCATCCTCAGACACTTCGGACACACACAGTCCCAGAGCTTGATCTGACCGTCCCAGCCGCAGGTGATCACCTTGGACGTCTCGTGAGGATGCCAGAGAGCGCTGATGCAGACCTTGTCGTGGGCCTTGATCCGATGATAGAGCTTGGTCGTCTTCCAGTCCCAGATGTTCAGCTTCCCGTCAGCGTCGCCCGAAACCACGTAACTGCAGCGCAGCGACAGAAACGCGTTAAAACACCCAGATATCACTTCATGTGTGCGGACGGATGATTGCATCCCAAATAAACGctttggtttacataatatacacacattaaata
>TU209690
TCCATTCACGGCCTGAAGAAATGTTTACATTGAAAATGAAGCGAAGGGGAAGCGGAAATAAAAGGGAGACATTTATTATCCtcaaaaagacagaaatgcGTGACACTGGAGATACAGATTCAttcattataaaacaacaaGCAGGAGCTGCAGTCTCTgacgcgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgt
>XM_043220554.1
TCCCCGCACCCGTCggatttatattatttttgaaatgaaataaagttgtcatttaataaatgttaaattacgTTAGCGGCTCAGGGTTTCTAGAGATTGTAACGGACTCCTATACGACGTCAATAAGTCCATCAATCAATAATGACTTTTCCATctcatgctgtttttgtaaacaatgttttatttagtccTTTTTGCGTCTCATTAGCGTCTTCTTACCTCGTAAGACGAAATAAAAACAGGCTTGTGATTCAGCTTTCCAATTCCTCTCAACAGGATATCACTCTGAAAAGAAAAGCACTGAGAGCACTAAATCAAATATGACTGGGATACTGTATGCGTGCCTGAAACCTAGTTTCCGCTGATAACAAGAGATGTCAGTGTTGAGCAGAAACACACAACACTCATAGTTTAGAGCCTTTCTACCAGCAAAAGCTCTCCAGAACAACTGCGCTCGTGCCTCCAGCTTTACTTGATTCTCCATCAGTCCTTTTCTAGAAGAGtcaggatcttttgaggagAACCTCCAAAACTTTATTTCTCCAGCTCTCCATCAGACATCTCATTTTATAATCAGTATCTGATTCCCAGTACGACTGATGGCTTGTCTGTGTTCTGATTGAACTTGTTCCCATGAGTCTTTGCAGCAGAAGCGGTTTCCTCGTTCTTCTCTCCTCTGAAGAACATGCAGCATTGTGCCGAGGCTCCGGTCGAGGggcggagtgtgtgtgtgtgtgtgtgtgtgtgtctagagTTACACGCCTCATCTGTCCAGAGGCGTGTGGGTGGAGAGACTCAAATCCGTGTGTGTTCTGCGTTCAGACGCTCACAGAGAAGGAGAAGATGTCTACCAGCGCTCGGCTGACTTTCTGAAGGCATGCGGACGGAGAGAAGAAGCACGGAAGTCAACAAAACCAACACGGAGAGCAGAAGATCGAGGAGCGCTGCGTGAAAGAGcgtgtgtgtgtgtgtgtgtgtgtcgcgtCACACACAGATGGAAGGCTGAGATGAGCCGTCTGCGCAGCTGCAGGACGAGGACGAGTGTGTGCGGCCTGCTGCTGTCGCTCATCTGCGTCTGCGCTCACGTCTACGTGCTGCGTCTGCACAAACACGGCCAGCGGCGCAGGACCGTCGCCACGGCAACAGATGCTGGGTCCACCTGCTGCTCGGCGCTGAAGCATCCCAGACGGATCTCTAGATGGAAGATCTCTCTGGAGCCGTGGGCCGCTGAGACTCGAGGTTTCCAGGAGGAGGCGGATCGGTTCCTCAGATACATCTCCACTCCGCAGctgtcCTGCCGGAGACCCGAGTCTGTGCCGCCCGTCTCTGACGCAGAGCATCATGGGTCGTGGGTGCTGTGTTTAGACCCCAGGTTTAGTCTGGCGCAGCGGATCTTGTCCAAACACTGCCGAGTCTATTCGCTCAGGCTGGGAGCGGAGGACGATGCTCTGGAGCGGTCTCTGTCCGTCTCTGGCTGTGAGGTTCACTGTTTTGACCCCAGCATCAGACGAGCTCACCTGCAGGATCATAACATGTGGCTCCACCGGCTCTCTGTGGACTGGAGGGACCCCAACCCCGCCGTCCCCGTCCAGAGACTCCACAGGGGCTCCAAGAAGCTCTCCGCCATCCTCAGACACTTCGGACACACACAGCTGGACGTGCTGAAGGTGGACCTGGAGAGCGCCGAGTGGAAGATCCTGGAGAACCTGGTCCTGGAGCAGGTGTGTACTAGcgggctgctgctgctggagcaAGTACATCTGCAGTGGGTGGACCTGGCCTCTTCCTGCACAGAGCCCTGGGGAACACCAGCAGCTCGTtcactgctgctgctggagcTCAACACCCGCAGTCACGCCCCAAACATGACCTCGGTGGTGCGCTATTGGTTCAGTCTGCTGAGGGAGCTGGAGCACGCCCATATCTGGATGATCACATTTACAGAGGCTTTCATCCAAAACAACTTCTAA

Function

NR:

description
PREDICTED: methyltransferase-like protein 24

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU209680 False 891 TUCP 0.60 6 25396208 25407942
TU209686 False 769 lncRNA 0.48 2 25388729 25393630
TU209688 False 289 lncRNA 0.46 2 25294844 25393630
TU209689 False 1002 TUCP 0.57 5 25393120 25407942
TU209690 False 275 lncRNA 0.45 2 25338356 25393683
XM_043220554.1 True 1970 mRNA 0.53 8 25395849 25408775

Neighbor

gene id symbol gene type direction distance location
gata4 gata4,LOC107671084,LOC107739180,LOC107557004,LOC107661355,LOC107728131,LOC107564601 coding downstream 71764 25212806 ~ 25223080 (-)
fdft1 fdft1,LOC107661354,LOC107671088 coding downstream 83248 25202241 ~ 25211596 (-)
ctsbb ctsbb,LOC107557005,LOC107661356 coding downstream 95913 25190559 ~ 25198931 (-)
LOC122325043 LOC107671087,LOC107728123,LOC107661362,LOC107556999 coding downstream 105324 25169118 ~ 25189520 (-)
bphl bphl coding downstream 141724 25151212 ~ 25153120 (-)
LOC122325309 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 coding upstream 62007 25470782 ~ 25561241 (-)
ppp2r5cb ppp2r5cb,LOC107704375,LOC108411434,LOC103025090,LOC108257814,LOC103369946 coding upstream 167254 25576029 ~ 25596184 (-)
hsp90aa1.2 LOC100701982,LOC102800076,LOC107378075,LOC103155532,LOC103457915,LOC105909576 coding upstream 188338 25597113 ~ 25609145 (-)
hsp90aa1.1 hsp90aa1.1,LOC107704377,LOC107557012,LOC107564585,LOC103024454,LOC106533044 coding upstream 200541 25609316 ~ 25615276 (-)
LOC122325306 mgat2,LOC107728126,LOC107564584,LOC107730605,LOC107704380 coding upstream 217877 25626652 ~ 25630935 (-)
G141979 NA non-coding downstream 396 25293302 ~ 25294448 (-)
G141951 NA non-coding downstream 126245 25165238 ~ 25168599 (-)
G141941 slc22a23,LOC107739176,LOC107572580,LOC107578994 non-coding downstream 163652 25066735 ~ 25131192 (-)
G141943 NA non-coding downstream 175081 25068982 ~ 25119763 (-)
G141920 phactr1,LOC107739173,LOC107655832,LOC107557022 non-coding downstream 234923 25054807 ~ 25059921 (-)
G142006 NA non-coding upstream 16843 25425618 ~ 25426323 (-)
G142009 NA non-coding upstream 22024 25430799 ~ 25431686 (-)
G142026 NA non-coding upstream 48634 25457409 ~ 25459232 (-)
G142015 NA non-coding upstream 65431 25474206 ~ 25596812 (-)
G142042 NA non-coding upstream 105472 25514247 ~ 25579261 (-)
rhpn1 rhpn1,LOC107704026,LOC107669421 other downstream 443065 24838652 ~ 24851779 (-)
G141651 NA other downstream 647423 24571413 ~ 24647421 (-)
slc35b2 slc35b2,LOC107704052,LOC107568229,LOC107559116,LOC107669435 other downstream 762481 24524069 ~ 24532363 (-)
LOC122324315 rbm25,rbm25b,hsp90ab1,LOC107704053,LOC107669447,LOC107732485,LOC107732486,LOC107568216,LOC107704054 other downstream 777101 24254393 ~ 24517743 (-)
G141502 NA other downstream 1288179 24004687 ~ 24006665 (-)
G142058 NA other upstream 239717 25648492 ~ 25650093 (-)
LOC122324601 slc25a29,LOC107678310,LOC107557018,LOC107728117,LOC107564594,LOC106608124 other upstream 338892 25747667 ~ 25754008 (-)
LOC122324466 samd15 other upstream 642054 26050829 ~ 26054469 (-)
pgfa LOC107712199,LOC107704385,LOC107564316,LOC107659813,LOC107575298 other upstream 679640 26088415 ~ 26096971 (-)
G142281 NA other upstream 776885 26185660 ~ 26187919 (-)

Expression


Co-expression Network