RNA id: TU209688



Basic Information


Item Value
RNA id TU209688
length 289
lncRNA type sense_over
GC content 0.46
exon number 2
gene id mettl24
representative False

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 25294844 ~ 25408775 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


GGAAATAAAAGGGAGACATTTATTATCCtcaaaaagacagaaatgcGTGACACTGGAGATACAGATTCAttcattataaaacaacaaGCAGGAGCTGCAGTCTCTgacgcgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagtgtgtgtgtgtgtgtgtgtgagtgtgagagtgtgtgtgagagagtgtgtgtgagtctgtgtgtgtgtgtgagagagtgtgtgtgtgtgtgtgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU209679 lncRNA downstream 396 25293302 ~ 25294448 (-) True G141979
TU209631 lncRNA downstream 126245 25165238 ~ 25168599 (-) True G141951
TU209611 lncRNA downstream 163652 25066735 ~ 25131192 (-) True G141941
TU209616 lncRNA downstream 175081 25068982 ~ 25119763 (-) False G141943
TU209615 lncRNA downstream 224435 25068982 ~ 25070409 (-) True G141943
TU209714 lncRNA upstream 5921 25399551 ~ 25400241 (-) True G141998
TU209725 lncRNA upstream 31988 25425618 ~ 25426323 (-) True G142006
TU209730 lncRNA upstream 37169 25430799 ~ 25431686 (-) True G142009
TU209754 lncRNA upstream 63779 25457409 ~ 25459232 (-) True G142026
TU209743 lncRNA upstream 80576 25474206 ~ 25596812 (-) True G142015
XM_043219886.1 mRNA downstream 71764 25212806 ~ 25223080 (-) True gata4
XM_043219885.1 mRNA downstream 83248 25202243 ~ 25211596 (-) False fdft1
XM_043219884.1 mRNA downstream 85611 25202241 ~ 25209233 (-) True fdft1
XM_043218747.1 mRNA downstream 95913 25190559 ~ 25198931 (-) False ctsbb
XM_043220554.1 mRNA upstream 2219 25395849 ~ 25408775 (-) True mettl24
XM_043220321.1 mRNA upstream 77152 25470782 ~ 25561241 (-) False LOC122325309
XM_043220320.1 mRNA upstream 77152 25470782 ~ 25540131 (-) True LOC122325309
XM_043220319.1 mRNA upstream 77152 25470782 ~ 25480800 (-) False LOC122325309
XM_043220311.1 mRNA upstream 182399 25576029 ~ 25596184 (-) False ppp2r5cb
TU209178 other downstream 443083 24847665 ~ 24851761 (-) False rhpn1
TU209125 other downstream 647423 24571413 ~ 24647421 (-) True G141651
TU209099 other downstream 763969 24525882 ~ 24530875 (-) False slc35b2
TU209065 other downstream 1033808 24257786 ~ 24261036 (-) False LOC122324315
TU208856 other downstream 1288179 24004687 ~ 24006665 (-) True G141502
TU209680 other upstream 2578 25396208 ~ 25407942 (-) False mettl24
unassigned_transcript_2514 other upstream 240230 25633860 ~ 25633943 (-) True trnas-gcu_30
TU209806 other upstream 254862 25648492 ~ 25650093 (-) True G142058
XR_006247208.1 other upstream 357287 25750917 ~ 25754008 (-) False LOC122324601
XR_006247205.1 other upstream 357293 25750923 ~ 25753677 (-) False LOC122324601

Expression Profile