RNA id: XM_043220554.1


Basic Information

Item Value
RNA id XM_043220554.1
length 1970
RNA type mRNA
GC content 0.53
exon number 8
gene id mettl24
representative True

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 25294844 ~ 25408775 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence

TCCCCGCACCCGTCggatttatattatttttgaaatgaaataaagttgtcatttaataaatgttaaattacgTTAGCGGCTCAGGGTTTCTAGAGATTGTAACGGACTCCTATACGACGTCAATAAGTCCATCAATCAATAATGACTTTTCCATctcatgctgtttttgtaaacaatgttttatttagtccTTTTTGCGTCTCATTAGCGTCTTCTTACCTCGTAAGACGAAATAAAAACAGGCTTGTGATTCAGCTTTCCAATTCCTCTCAACAGGATATCACTCTGAAAAGAAAAGCACTGAGAGCACTAAATCAAATATGACTGGGATACTGTATGCGTGCCTGAAACCTAGTTTCCGCTGATAACAAGAGATGTCAGTGTTGAGCAGAAACACACAACACTCATAGTTTAGAGCCTTTCTACCAGCAAAAGCTCTCCAGAACAACTGCGCTCGTGCCTCCAGCTTTACTTGATTCTCCATCAGTCCTTTTCTAGAAGAGtcaggatcttttgaggagAACCTCCAAAACTTTATTTCTCCAGCTCTCCATCAGACATCTCATTTTATAATCAGTATCTGATTCCCAGTACGACTGATGGCTTGTCTGTGTTCTGATTGAACTTGTTCCCATGAGTCTTTGCAGCAGAAGCGGTTTCCTCGTTCTTCTCTCCTCTGAAGAACATGCAGCATTGTGCCGAGGCTCCGGTCGAGGggcggagtgtgtgtgtgtgtgtgtgtgtgtgtctagagTTACACGCCTCATCTGTCCAGAGGCGTGTGGGTGGAGAGACTCAAATCCGTGTGTGTTCTGCGTTCAGACGCTCACAGAGAAGGAGAAGATGTCTACCAGCGCTCGGCTGACTTTCTGAAGGCATGCGGACGGAGAGAAGAAGCACGGAAGTCAACAAAACCAACACGGAGAGCAGAAGATCGAGGAGCGCTGCGTGAAAGAGcgtgtgtgtgtgtgtgtgtgtgtcgcgtCACACACAGATGGAAGGCTGAGATGAGCCGTCTGCGCAGCTGCAGGACGAGGACGAGTGTGTGCGGCCTGCTGCTGTCGCTCATCTGCGTCTGCGCTCACGTCTACGTGCTGCGTCTGCACAAACACGGCCAGCGGCGCAGGACCGTCGCCACGGCAACAGATGCTGGGTCCACCTGCTGCTCGGCGCTGAAGCATCCCAGACGGATCTCTAGATGGAAGATCTCTCTGGAGCCGTGGGCCGCTGAGACTCGAGGTTTCCAGGAGGAGGCGGATCGGTTCCTCAGATACATCTCCACTCCGCAGctgtcCTGCCGGAGACCCGAGTCTGTGCCGCCCGTCTCTGACGCAGAGCATCATGGGTCGTGGGTGCTGTGTTTAGACCCCAGGTTTAGTCTGGCGCAGCGGATCTTGTCCAAACACTGCCGAGTCTATTCGCTCAGGCTGGGAGCGGAGGACGATGCTCTGGAGCGGTCTCTGTCCGTCTCTGGCTGTGAGGTTCACTGTTTTGACCCCAGCATCAGACGAGCTCACCTGCAGGATCATAACATGTGGCTCCACCGGCTCTCTGTGGACTGGAGGGACCCCAACCCCGCCGTCCCCGTCCAGAGACTCCACAGGGGCTCCAAGAAGCTCTCCGCCATCCTCAGACACTTCGGACACACACAGCTGGACGTGCTGAAGGTGGACCTGGAGAGCGCCGAGTGGAAGATCCTGGAGAACCTGGTCCTGGAGCAGGTGTGTACTAGcgggctgctgctgctggagcaAGTACATCTGCAGTGGGTGGACCTGGCCTCTTCCTGCACAGAGCCCTGGGGAACACCAGCAGCTCGTtcactgctgctgctggagcTCAACACCCGCAGTCACGCCCCAAACATGACCTCGGTGGTGCGCTATTGGTTCAGTCTGCTGAGGGAGCTGGAGCACGCCCATATCTGGATGATCACATTTACAGAGGCTTTCATCCAAAACAACTTCTAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU209690 lncRNA downstream 2166 25338356 ~ 25393683 (-) False mettl24
TU209688 lncRNA downstream 2219 25294844 ~ 25393630 (-) False mettl24
TU209686 lncRNA downstream 2219 25388729 ~ 25393630 (-) False mettl24
TU209674 lncRNA downstream 60805 25279727 ~ 25335044 (-) True G141974
TU209666 lncRNA downstream 67335 25326508 ~ 25328514 (-) False wasf1
TU209725 lncRNA upstream 16843 25425618 ~ 25426323 (-) True G142006
TU209730 lncRNA upstream 22024 25430799 ~ 25431686 (-) True G142009
TU209754 lncRNA upstream 48634 25457409 ~ 25459232 (-) True G142026
TU209743 lncRNA upstream 65431 25474206 ~ 25596812 (-) True G142015
TU209776 lncRNA upstream 105472 25514247 ~ 25579261 (-) True G142042
XM_043218756.1 mRNA downstream 37854 25326611 ~ 25357995 (-) True wasf1
XM_043219886.1 mRNA downstream 172769 25212806 ~ 25223080 (-) True gata4
XM_043219885.1 mRNA downstream 184253 25202243 ~ 25211596 (-) False fdft1
XM_043219884.1 mRNA downstream 186616 25202241 ~ 25209233 (-) True fdft1
XM_043218747.1 mRNA downstream 196918 25190559 ~ 25198931 (-) False ctsbb
XM_043220321.1 mRNA upstream 62007 25470782 ~ 25561241 (-) False LOC122325309
XM_043220320.1 mRNA upstream 62007 25470782 ~ 25540131 (-) True LOC122325309
XM_043220319.1 mRNA upstream 62007 25470782 ~ 25480800 (-) False LOC122325309
XM_043220311.1 mRNA upstream 167254 25576029 ~ 25596184 (-) False ppp2r5cb
XM_043220310.1 mRNA upstream 167254 25576029 ~ 25596175 (-) True ppp2r5cb
TU209701 other downstream 18433 25330926 ~ 25377416 (-) False wasf1
TU209665 other downstream 66244 25328580 ~ 25329605 (-) False wasf1
TU209178 other downstream 544088 24847665 ~ 24851761 (-) False rhpn1
TU209125 other downstream 748428 24571413 ~ 24647421 (-) True G141651
TU209099 other downstream 864974 24525882 ~ 24530875 (-) False slc35b2
unassigned_transcript_2514 other upstream 225085 25633860 ~ 25633943 (-) True trnas-gcu_30
TU209806 other upstream 239717 25648492 ~ 25650093 (-) True G142058
XR_006247208.1 other upstream 342142 25750917 ~ 25754008 (-) False LOC122324601
XR_006247205.1 other upstream 342148 25750923 ~ 25753677 (-) False LOC122324601
XR_006247207.1 other upstream 343766 25752541 ~ 25754004 (-) False LOC122324601

Expression Profile