RNA id: TU209690



Basic Information


Item Value
RNA id TU209690
length 275
lncRNA type sense_over
GC content 0.45
exon number 2
gene id mettl24
representative False

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 25294844 ~ 25408775 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


TCCATTCACGGCCTGAAGAAATGTTTACATTGAAAATGAAGCGAAGGGGAAGCGGAAATAAAAGGGAGACATTTATTATCCtcaaaaagacagaaatgcGTGACACTGGAGATACAGATTCAttcattataaaacaacaaGCAGGAGCTGCAGTCTCTgacgcgcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU209674 lncRNA downstream 3312 25279727 ~ 25335044 (-) True G141974
TU209666 lncRNA downstream 9842 25326508 ~ 25328514 (-) False wasf1
TU209671 lncRNA downstream 12547 25277144 ~ 25325809 (-) True G141972
TU209659 lncRNA downstream 32653 25218529 ~ 25305703 (-) True G141966
TU209714 lncRNA upstream 5868 25399551 ~ 25400241 (-) True G141998
TU209725 lncRNA upstream 31935 25425618 ~ 25426323 (-) True G142006
TU209730 lncRNA upstream 37116 25430799 ~ 25431686 (-) True G142009
TU209754 lncRNA upstream 63726 25457409 ~ 25459232 (-) True G142026
TU209743 lncRNA upstream 80523 25474206 ~ 25596812 (-) True G142015
XM_043219886.1 mRNA downstream 115276 25212806 ~ 25223080 (-) True gata4
XM_043219885.1 mRNA downstream 126760 25202243 ~ 25211596 (-) False fdft1
XM_043219884.1 mRNA downstream 129123 25202241 ~ 25209233 (-) True fdft1
XM_043218747.1 mRNA downstream 139425 25190559 ~ 25198931 (-) False ctsbb
XM_043220554.1 mRNA upstream 2166 25395849 ~ 25408775 (-) True mettl24
XM_043220321.1 mRNA upstream 77099 25470782 ~ 25561241 (-) False LOC122325309
XM_043220320.1 mRNA upstream 77099 25470782 ~ 25540131 (-) True LOC122325309
XM_043220319.1 mRNA upstream 77099 25470782 ~ 25480800 (-) False LOC122325309
XM_043220311.1 mRNA upstream 182346 25576029 ~ 25596184 (-) False ppp2r5cb
TU209665 other downstream 8751 25328580 ~ 25329605 (-) False wasf1
TU209178 other downstream 486595 24847665 ~ 24851761 (-) False rhpn1
TU209125 other downstream 690935 24571413 ~ 24647421 (-) True G141651
TU209099 other downstream 807481 24525882 ~ 24530875 (-) False slc35b2
TU209065 other downstream 1077320 24257786 ~ 24261036 (-) False LOC122324315
TU209680 other upstream 2525 25396208 ~ 25407942 (-) False mettl24
unassigned_transcript_2514 other upstream 240177 25633860 ~ 25633943 (-) True trnas-gcu_30
TU209806 other upstream 254809 25648492 ~ 25650093 (-) True G142058
XR_006247208.1 other upstream 357234 25750917 ~ 25754008 (-) False LOC122324601
XR_006247205.1 other upstream 357240 25750923 ~ 25753677 (-) False LOC122324601

Expression Profile