RNA id: TU209659



Basic Information


Item Value
RNA id TU209659
length 359
lncRNA type sense_over
GC content 0.46
exon number 3
gene id G141966
representative True

Chromosome Information


Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 25218529 ~ 25305703 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome
species tiger barb
(Puntius tetrazona)

Sequence


CGCGTCTAATTTCTTGGTATCATTGTTCCTCTCCACCTTGTGCTGGTTCTGGCCCAGATGAGcaaatctataaacacagaGATAAACGATGAAAGCATCAGTGATCTTAATCAGCGGCGACAAATTCCATTCACAGCTCAAAGACAACGAGACTCCTGAAGAGACACGGATAAAAGGGTGACAGAGTTTCCTAGAAATTTCTGCATTTCAcctatgggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU209631 lncRNA downstream 49930 25165238 ~ 25168599 (-) True G141951
TU209611 lncRNA downstream 87337 25066735 ~ 25131192 (-) True G141941
TU209616 lncRNA downstream 98766 25068982 ~ 25119763 (-) False G141943
TU209615 lncRNA downstream 148120 25068982 ~ 25070409 (-) True G141943
TU209575 lncRNA downstream 158608 25054807 ~ 25059921 (-) True G141920
TU209666 lncRNA upstream 20805 25326508 ~ 25328514 (-) False wasf1
TU209690 lncRNA upstream 32653 25338356 ~ 25393683 (-) False mettl24
TU209686 lncRNA upstream 83026 25388729 ~ 25393630 (-) False mettl24
TU209714 lncRNA upstream 93848 25399551 ~ 25400241 (-) True G141998
TU209725 lncRNA upstream 119915 25425618 ~ 25426323 (-) True G142006
XM_043219885.1 mRNA downstream 6933 25202243 ~ 25211596 (-) False fdft1
XM_043219884.1 mRNA downstream 9296 25202241 ~ 25209233 (-) True fdft1
XM_043218747.1 mRNA downstream 19598 25190559 ~ 25198931 (-) False ctsbb
XM_043218748.1 mRNA downstream 19602 25190559 ~ 25198927 (-) True ctsbb
XM_043219874.1 mRNA downstream 29013 25169118 ~ 25189516 (-) False LOC122325043
XM_043218756.1 mRNA upstream 20908 25326611 ~ 25357995 (-) True wasf1
XM_043220554.1 mRNA upstream 90146 25395849 ~ 25408775 (-) True mettl24
XM_043220321.1 mRNA upstream 165079 25470782 ~ 25561241 (-) False LOC122325309
XM_043220320.1 mRNA upstream 165079 25470782 ~ 25540131 (-) True LOC122325309
XM_043220319.1 mRNA upstream 165079 25470782 ~ 25480800 (-) False LOC122325309
TU209178 other downstream 366768 24847665 ~ 24851761 (-) False rhpn1
TU209125 other downstream 571108 24571413 ~ 24647421 (-) True G141651
TU209099 other downstream 687654 24525882 ~ 24530875 (-) False slc35b2
TU209065 other downstream 957493 24257786 ~ 24261036 (-) False LOC122324315
TU208856 other downstream 1211864 24004687 ~ 24006665 (-) True G141502
TU209665 other upstream 22877 25328580 ~ 25329605 (-) False wasf1
TU209701 other upstream 25223 25330926 ~ 25377416 (-) False wasf1
TU209689 other upstream 87417 25393120 ~ 25407942 (-) False mettl24
TU209680 other upstream 90505 25396208 ~ 25407942 (-) False mettl24
unassigned_transcript_2514 other upstream 328157 25633860 ~ 25633943 (-) True trnas-gcu_30

Expression Profile