slc35f6 (slc35f6,LOC107721386,LOC107683918,LOC107737338,LOC107665330,LOC107555739)


Basic Information

Item Value
gene id slc35f6
gene name slc35f6,LOC107721386,LOC107683918,LOC107737338,LOC107665330,LOC107555739
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 13493264 ~ 13497767 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043219194.1
AGAGTCACATGATCGCCATCATATGATTTGCATACAGGGGAACGACCTGTTTAAGATAGCTGAACTCATCATCAGCGAGAAAGACACATCTCAAGACAGTTTGAGAGTTTGATGATCGGAGTCATCCACCATGGCTTGGACAAAATACCAGCTCTTTCTCGCCGGTCTGATGCTCACCACGGGCTCTATCAACACGCTCTCCGCAAAATGGGCTGATATGTTCTCTGCACCTGGTTGTCATGGTTCCCCAAATCATGCCTTCTCCCACCCTTTTGTACAGGCTGTGGGGATGTTTCTGGGAGAGCTTTCCTGTCTGGTGGTGTTCTACATTCTCCTTTGTCATGATCGGCACAAACCTGAGCCCACAATGGATCCGGGCCAAAGTTTCAACCCCCTGCTTTTTCTCCCCCCTGCCCTTTGTGACATGTTGGGAACATCCATCATGTATGTTGCACTGAACATGACCAGTGCCTCCAGTTTCCAGATGCTGCGAGGAGCTGTGATCATCTTCACTGGACTCTTGTCTGTAGCGTTTTTAGGACGCCGACTTCAGCCCAGTCAGTGGGTTGGGATACTAGTCACCATCTTTGGACTGGTGGTGGTTGGCCTAGCTGATTTCATGAGTGGCCATGGGGATGACTCCCATAAGCTCAGTGAGGTTATCACAGGGGACCTTTTGATCATCATGGCACAAATTATTGTTGCAGTCCAAATGGTCCTGGAGGAGAAGTTTGTTTACAAGCACAATGTGCATCCACTGAAGGCTGTTGGGACtgaagGTTTTTTCGGATTTGTCATCCTCTCTTTGCTTCTTATCCCAATGTTCTACATCCACGTGGGAAGTTTTGCTGATAACCCACGGCAGGTCCTTGAAGACGCGCTGGATGCCTTCTGTCAGATTGGCCATAAGCCCCTTATTTTACTGGCACTGCTGGGCAACACCGTGAGCATCGCCTTCTTTAACTTCGCTGGCATCAGCGTCACCAAGGAAATAAGTGCCACTACTCGCATGGTTCTGGACAGTCTGCGTACTCTGGTCATCTGGGTTGTGAGTTTACTGCTGGGTTGGGAGGTATTCCATGGCCTACAGATTTTAGGCTTCATCATCCTACTCGTGGGTACAGCACTATACAATGGACTCCACAAGCCCTTGATGGCCAAACTGCCCTGCTGCCACGGAGAGCAGAGAGTAGAGGAGGGAGAggctccagagagagagagactgcttGGTGCAGGAAAAGCTGCAAACGAGAGCTAATATTGGACTTTGATCAAAATGCTGCTcgcaaagcattttattttagttttaactgttatttcaattttaagaaTCACAATGTTTTTAGAGTTTGATTCAACACTTGGAAACCATCACTACTAATTGCCTACAGCCATTTTTGTGGGCATGtctcaacagttttttttttttaaaaaaaaaaaaaaaaagaacagttgtgctttagattttaaaatggtggaatgcacatttttacttTAGGAAAGGGAATTATATTTCATGATTTTGATGccaaaaatcttaatattttaaattttttaatccTGTGGTTTTTAATACCACAATTTATAGGTTTTAAAACATCTTGTTTATGTGCTGTTGTTTGGGAGGACATTATTTCTCTAaccattttatttgaataatatttttagtgatctGTGAAACGGGTATTGTgtactcacaaaaaaaaaaaatcttctgttAGTTGAAGTATATTTGGTTTATAAAAATATGGAAGGCTCGCTGAGTTTACTGCAAGTAAATATTacaatgttgttgttgttttttagcaCATGGAACCATAATCTCAAACAGTGTATCTGCATAAATCAGATAATTTGAAATTAtctattctttttatatatatatatatatgaatgaatgaatgaatatttgtttgttgttaatgAAAACATGAAGAAGAAAGAACTGAATGACTATGATGGATTAAATGCAAGTAATGTCTGTGTGACATATCTAA

Function

symbol description
slc35f6 Predicted to enable transmembrane transporter activity. Predicted to be involved in negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway and positive regulation of cell population proliferation. Predicted to act upstream of or within transmembrane transport. Predicted to be located in mitochondrion. Predicted to be integral component of membrane. Predicted to be active in intracellular membrane-bounded organelle and membrane. Is expressed in yolk syncytial layer. Orthologous to human SLC35F6 (solute carrier family 35 member F6).

NR:

description
PREDICTED: solute carrier family 35 member F6

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043219194.1 True 1997 mRNA 0.41 6 13493264 13497767

Neighbor

gene id symbol gene type direction distance location
zgc:153896 zgc:153896,LOC107737337,LOC107721358,LOC107665343,LOC107556161 coding upstream 10923 13478785 ~ 13482341 (+)
ppat ppat,LOC107721366,LOC107737308,LOC107683925,LOC107665312,LOC107556156 coding upstream 80752 13402524 ~ 13412512 (+)
LOC122325386 cyp2p9,cyp2p8,LOC107556152,LOC107737305,LOC107665313,LOC107556153 coding upstream 96556 13393212 ~ 13396708 (+)
LOC122325385 cyp2p8,LOC107737305,LOC107665313,LOC107556153,LOC107556152 coding upstream 109633 13378868 ~ 13383631 (+)
LOC122325382 cyp2v1,LOC107556151,LOC107737300 coding upstream 126091 13363279 ~ 13367173 (+)
ttbk2b ttbk2b,LOC107721367,LOC107737314,LOC107556162,LOC107659228,LOC107665301,LOC108424489 coding downstream 477 13498244 ~ 13508603 (+)
znf106b NA coding downstream 13142 13510909 ~ 13517188 (+)
nrbp1 nrbp1,LOC107665360,LOC107659221,LOC107737320 coding downstream 28682 13526449 ~ 13538512 (+)
zbtb2b zbtb2b,LOC107721350,LOC107556169,LOC107711638,LOC107665357,LOC107555769,LOC107659215 coding downstream 193615 13691382 ~ 13699864 (+)
stx11b.1 stx11b.1,LOC107577280,LOC107659168,LOC107556142,LOC107711624,LOC107665418 coding downstream 267850 13765617 ~ 13767828 (+)
G138103 LOC107721365,LOC107683924,LOC107555745,LOC107737306,LOC107556155,LOC107665310 non-coding upstream 87395 13404566 ~ 13405869 (+)
G138081 NA non-coding upstream 132777 13349160 ~ 13360487 (+)
G138079 NA non-coding upstream 153155 13319806 ~ 13340109 (+)
G138068 NA non-coding upstream 207211 13284887 ~ 13286053 (+)
LOC122325040 NA non-coding upstream 245733 13228352 ~ 13247531 (+)
LOC122325034 NA non-coding downstream 176396 13674163 ~ 13675427 (+)
G138244 armt1,LOC107721382,LOC107555770,LOC107556129,LOC107737326 non-coding downstream 184618 13682385 ~ 13686730 (+)
G138322 NA non-coding downstream 285731 13783498 ~ 13784748 (+)
G138380 NA non-coding downstream 447476 13945243 ~ 13945743 (+)
G138372 NA non-coding downstream 564297 14062064 ~ 14089796 (+)
cep135 cep135 other upstream 31561 13446610 ~ 13461703 (+)
aasdh aasdh other upstream 58751 13416680 ~ 13434513 (+)
LOC122325384 cyp2p7,cyp2p10,cyp2p8,LOC107556152,LOC107737305,LOC107665313,LOC107556153 other upstream 105614 13384365 ~ 13387650 (+)
LOC122324921 LOC107601942,LOC107755262,LOC107683940,LOC107665389,LOC107739375 other upstream 1464964 12026309 ~ 12028300 (+)
LOC122324922 nek1,LOC107755260,LOC107683980,LOC107665351,LOC107601920 other upstream 1518049 11950748 ~ 11975215 (+)
syne1a LOC107737324,LOC107665323,LOC107556168,LOC107659217,LOC107555741 other downstream 74079 13571846 ~ 13671275 (+)
tmem251 tmem251 other downstream 554202 14051969 ~ 14054833 (+)
si:dkey-85n7.8 si:dkey-85n7.8,LOC107602311 other downstream 610526 14108293 ~ 14109604 (+)
prima1 si:dkey-85n7.6,LOC107602279,LOC107659191,LOC107583807,LOC108424448,LOC103041400 other downstream 628248 14126015 ~ 14147913 (+)
LOC122324585 kif26aa,LOC107721264,LOC107602192,LOC107711661,LOC107668200,LOC107569886,LOC107659150 other downstream 712255 14210022 ~ 14270338 (+)

Expression


Co-expression Network