zbtb2b (zbtb2b,LOC107721350,LOC107556169,LOC107711638,LOC107665357,LOC107555769,LOC107659215)


Basic Information

Item Value
gene id zbtb2b
gene name zbtb2b,LOC107721350,LOC107556169,LOC107711638,LOC107665357,LOC107555769,LOC107659215
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056718.1
NCBI id CM032087.1
chromosome length 27616869
location 13691382 ~ 13699864 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043220439.1
AATAAGGCTCATTAAGTTTATTGCAGCCTGTGGGTGTGAAATCATCATCGCGCTCCAAATAATACACGCATTTCTCGCGAGCCCGTTTCTGTTGGCTGTAAAAGTGCACAGTCTGTCAACTGAAATGCAAATAGCCCTTCTGCGTGTATCTGTCTCGATACGTTATCTTCATGTGGGGGTGGGTAGCGTGACCTACGGCTATCCAACTCCACTAAAATCCGTTTATCTGTAACGTTCACCAACGATCGTCGCCCCTGAACGATCGCTCAACATTCGTCTCCGCCGCACCGTGAACACATGAGGAGAACGACACCCGTAACGTTCACCAGCGCACTCGTTTGGCGGCTCTTAGCGCCAAAGACCGTTTGTTTTGGCATCCCAGGGAAGTGGGTTTTACAACCGCTGTTTTTAAGCCCTTTTAGACAGTCATGTGATTGTAACGTAACCCGACCGGAAAACACCGACGACCATCGCCGCCAATGCTGCGTTTGAGAGGAACAGAGCAGCTGCGAGCCCAACGGACAAGTCCCCCGGTAACAGACAACAACTCGCCCAACTCCACACGCTCGAGCGGAGGAAAGGTGGAAGTATGGAGCTGGCCAATCATGGTCTTATCCTTCTGCAGCAGCTCAACGCGCAGAGGGAGTTTGGCTTCCTGTGTGACTGCACGGTCGCCATCGGCGATGTCTTTTTCAAAGCACACAAGGCTGTACTGGCCGCATTCTCAAACTACTTCAGAATGCTATTTATACACCAGGACAGTGACTGTGTCCGCTTGAAACCTGCTGACATTCAACCCGACATCTTCAGCTACCTCCTCAATCTGATGTACACCGGAAAACTGGCGACGCAGCTTATCGATCCAGCTCGCCTGGAGCAGGGCGTCAAGTTCCTCCACGCGTACCCTCTGATTCAGGAGGCAAGTCTGGCTAGCCATGCGGCTCAGGCACATCCTGAGGTCAGTCTTCCCCTGTCGTCCTCTCTTTATGGCATTCAGATATCAGACCAACAGGCTACGCTCACAAATCGCGTCTCAACGAGAACGCATCTCTCTTCGCCGTTCGACCTGGAAGGTTTGCTCGATGGGAAGTGTGCTACCACGAACAAAGCTACCTCACTGACGCGGCCTGTATCCAAGCACAGGCAAGCTCTGTCAGAAGCAGAGGTAGAATCGTCGGCGAGCACCAGTCAATTTGTGAGGGAAGGCGGCGAGACCGAAGCATCTGGAGGTGAAGCCCCATCTTGCTCCCTGAACGCCAACACCATTCTGCATGTGAAGCCCAGCATCATGAGAAGAAGTTCCTCTTTGAGGAAGCATTATACGTGCCACGTCTGCGGGGGGCGCTTTACCCAGCGGGGCGCCTTGCGAGAGCACCTGCTTCTACACACCCAGGCTATGCTCCCCCTGGTGTTAGAGTCTGTCGGTGCAGCTTCCCCAATGCCGCCTGGAGGTGCTGCCACACCAGAGGTGGAGGAAGTCTTCAGAGGCAGCGAAGCGGTAGCAGCCACTCCCATCATCGTGGATGCTGCTAGTGACAGTGAGCAACATCTGTACTCAAAAGACTCGCCACACCCCGAAACCGCCATGCCCGTCCCAACAACGACCGCAGTCAGCCTGTGCACCGCTCAGCCCCAGGCGGACACACCGCCTCCGTCCGATATCGCTGATATCGACAACCTAGAAGGTGCGGCTGACATGGAGCGGGAAGTGAAGCGGAGGAAATATGAGTGCTCCACTTGTGGTCGCAAGTTCATCCAGAAGAGCCACTGGAGAGAGCACATGTACATCCATACGGGAAAGCCGTACCGCTGCAGCGCCTGCGGCAAGAGCTTTTGTCGGGCCAACCAGGCGGCGCGGCACGTTTGCATGAATCTGGGCTCGGAGCCAGCGTACACCATGGTGGACCGACAGAGCATGGAGCTGTGCGCCGCAGACGACTCCAGCCAAATGGAGGCGTTGTTTCTCGGTTCTTCTGGGAGGCCGTACAAATGCAATGTTTGTGAAATGACCTTTTCCAGTCCTAATGAGGTGATCAAGCACCTGTGTTTTAACCAGGGAGCTCTAGCGGGTGCAGCGGCTGGAGAAATGGGTGTCAGCGGGCTGAACAGTGACAGCCTGGCCAAAGACGAAGGCTCAGATTCATCCAACGGTGGGCCTTTGATAACGCCCATCAAAACCGAGGAAGTCTTTGTAGAATAGCTTCACATTCATCCACTTCAGAGtattgttgttgtgtttttttttttttttttttttttttttgttttttttcaattgtattGCATTTGTGGGTAAATTATGATCAGAAGTTAAGCTACAGAGAGAAAATTCTgttatattgtttcttttttttttttttcagggaatTTTACTTCTACTGAAaagttatacttttttttttttttcatgcattcatttactatatttataacaGATTTACGGTAGGTTTAATCCAACAATTCAAAGTCCTGCTTCGTTCTGTGTTTCTTTCAAGGGTTTTACTGTTTACTCGGGTCACTTGTAGTGCTGCGGTTAAAGCTCTTCCTCTGCCTAACGGTCTACAGGAAAAGGATGTAGTGAACTGCTAAAATCCTGCTTTTGTCACAGACCAAATCAGATGTAGACCTCATTAGGTTGGATCgggaatatttaaaattattaaagccACAAAATGATTGGTTCATGGGTACAACACCaaaatttcttttgaaaataagaaatgtcaCTTTCTGAGCAGCTAAATGGAGGTTCTGGTTTAGGATGAGTATTCACTACCTCAACCGGTTTCAGACATGCAATATCAGACTTACCTGAAATTTGCATCAAAGGGTCGAGGATCAAAGTCAACTTTATTTTTCCAGTGCCTCCGAGGAGTTATACAGATCTcaaagttttttctttcttacacCGTTTCTAATTTCTCATTACATGCTTTGGGTTAGCAAGAGCAAGGTGTAATTGTAGATAACCTTCATGCAGTGCCAGATTACCTGTCGAACATCGCTTATATTGTTAATGTGACCCACGACATATTTGCCTAATTATCCACTTTTGTCAGTTTGttacagtgcttttttttttcgtgcCAATGCCACCTAAACATTCATGCTGTAAAATTGGTCGGCGGCAGCAGCTCATCAGCGATTCGGTTGTGTTGCTCTCACTGTGGTTCAACATGTTTACAGTTGTGCTGTGCGTTTAATCAAAGTTGTTACTGTGTGTGATTTTAGAAGACACTGTGGCCAAtcgtatatatatgtgtataacaTTTGCTTGAAGGGAGATATTTCTGTCACTGTTTGCTGATTTAATTTTTGCCATGATTTGCTTAAATATGCTCTTAAATTCCttatttttgagttttataTAACTTTTCTAATTTTATGTACAGTGCTTTATTTACAAAGAATTATAATCTCAGAGGTTGTAtattgtttaatgcatttactgtagaatattagccatttgtAGTGTAGCACaagtatgtgtatatttgtcatctgtctttgttttaatgaaactgACAGTGAAGTCATGCTGTAAAAGCACTGATGTCTGCTAAAGATTCCGACTACTTTCATCAATATACTTGTGCTACATCAGGAAACGTTTGTCATTTGCAGCCAGGGTGATTTACATTCAGTGCTTTATATTTCTTCCATCTTTCTCTTTGTAAAAACCTTGTAGGAATTTATTTTAAGAGCACTGTGAGAGCACTGTGAGTTAAGTTACTACTGAATAGTTCATTAAAGCCCAGGAATGACCATTTGCTTCATTTTGTtacaaggattttttttttctttttaccgtaatgttacttttttttttttttttttttttttttttttttttttttaatcatacatCAGGCGATGTCATGCCTTTTTCCCCGTAGTATTGTTACAACTCTTTGTTATTTGTACATATGCAAGTTGTTACTATTTGAGACAGTTTTAGGGAGGAAGGGGTAAAGGTGCCCCCTCAAACGCACAAACCCCAAAGCCAAGGCAAAACATACTGTGATCTCTCGCTCCTCAGGAACATGAACAGTCGTCTctggaaaaaaatacttcctttgcattttcattgtgaataatgataataaatccttatgtttttgaaa

Function

symbol description
zbtb2b Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleoplasm. Is expressed in several structures, including alar plate midbrain region; immature eye; optic tectum; vasculature; and ventral mesoderm. Orthologous to human ZBTB2 (zinc finger and BTB domain containing 2).

NR:

description
PREDICTED: zinc finger and BTB domain-containing protein 2

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K10489 ZBTB2; zinc finger and BTB domain-containing protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043220439.1 True 4124 mRNA 0.45 3 13691382 13699864

Neighbor

gene id symbol gene type direction distance location
nrbp1 nrbp1,LOC107665360,LOC107659221,LOC107737320 coding upstream 152870 13526449 ~ 13538512 (+)
znf106b NA coding upstream 174194 13510909 ~ 13517188 (+)
ttbk2b ttbk2b,LOC107721367,LOC107737314,LOC107556162,LOC107659228,LOC107665301,LOC108424489 coding upstream 182779 13498244 ~ 13508603 (+)
slc35f6 slc35f6,LOC107721386,LOC107683918,LOC107737338,LOC107665330,LOC107555739 coding upstream 193615 13493264 ~ 13497767 (+)
zgc:153896 zgc:153896,LOC107737337,LOC107721358,LOC107665343,LOC107556161 coding upstream 209041 13478785 ~ 13482341 (+)
stx11b.1 stx11b.1,LOC107577280,LOC107659168,LOC107556142,LOC107711624,LOC107665418 coding downstream 65753 13765617 ~ 13767828 (+)
irf4b irf4b,LOC107555743,LOC107721284,LOC107659166,LOC107711625,LOC107665387 coding downstream 73288 13773152 ~ 13778082 (+)
foxq1b foxq1b,LOC107659165,LOC107721275,LOC107711626,LOC107665328,LOC107555749,LOC107556144 coding downstream 130692 13830556 ~ 13832068 (+)
foxf2b foxf2b,LOC107721287,LOC107659210,LOC107555773,LOC107711627,LOC107665339,LOC107556145 coding downstream 137440 13837304 ~ 13839876 (+)
foxc1b foxc1b,foxc1,LOC107556146,LOC107555772,LOC107721387,LOC107711628 coding downstream 145425 13845289 ~ 13847239 (+)
G138244 armt1,LOC107721382,LOC107555770,LOC107556129,LOC107737326 non-coding upstream 4652 13682385 ~ 13686730 (+)
LOC122325034 NA non-coding upstream 15955 13674163 ~ 13675427 (+)
G138103 LOC107721365,LOC107683924,LOC107555745,LOC107737306,LOC107556155,LOC107665310 non-coding upstream 285513 13404566 ~ 13405869 (+)
G138081 NA non-coding upstream 330895 13349160 ~ 13360487 (+)
G138079 NA non-coding upstream 351273 13319806 ~ 13340109 (+)
G138322 NA non-coding downstream 83634 13783498 ~ 13784748 (+)
G138380 NA non-coding downstream 245379 13945243 ~ 13945743 (+)
G138372 NA non-coding downstream 362200 14062064 ~ 14089796 (+)
LOC122324590 NA non-coding downstream 721637 14421501 ~ 14422765 (+)
G138484 NA non-coding downstream 727095 14426959 ~ 14428282 (+)
syne1a LOC107737324,LOC107665323,LOC107556168,LOC107659217,LOC107555741 other upstream 20107 13571846 ~ 13671275 (+)
cep135 cep135 other upstream 229679 13446610 ~ 13461703 (+)
aasdh aasdh other upstream 256869 13416680 ~ 13434513 (+)
LOC122325384 cyp2p7,cyp2p10,cyp2p8,LOC107556152,LOC107737305,LOC107665313,LOC107556153 other upstream 303732 13384365 ~ 13387650 (+)
LOC122324921 LOC107601942,LOC107755262,LOC107683940,LOC107665389,LOC107739375 other upstream 1663082 12026309 ~ 12028300 (+)
tmem251 tmem251 other downstream 352105 14051969 ~ 14054833 (+)
si:dkey-85n7.8 si:dkey-85n7.8,LOC107602311 other downstream 408429 14108293 ~ 14109604 (+)
prima1 si:dkey-85n7.6,LOC107602279,LOC107659191,LOC107583807,LOC108424448,LOC103041400 other downstream 426151 14126015 ~ 14147913 (+)
LOC122324585 kif26aa,LOC107721264,LOC107602192,LOC107711661,LOC107668200,LOC107569886,LOC107659150 other downstream 510158 14210022 ~ 14270338 (+)
slc10a1 slc10a1,LOC107668231,LOC107671779,LOC107756602,LOC107721315 other downstream 1303546 15003410 ~ 15015372 (+)

Expression


Co-expression Network