CI01000001_10328133_10329110


Basic Information

Item Value
gene id CI01000001_10328133_10329110
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10328040 ~ 10329110 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_10328133_10329110.mRNA
AAATATATTTGACCGTTATCCCAACAGACACATTTCTCGTGTTAAACGTACAGCGTCACGCGAATCTGTCGCTCAGAACTGAACGCCACCGCGATGACCCGTGACATGAAATTTCTCATTTTTCTGGGTGCTGTGGGGTGGGGGGTAATATTTTATTTTTCCGCAGTCTCTAACCCGCCCGCTCCATATCTAAAGTGCGGCGACAGGCCTGAGAGAGAAATTAAACATCGAAACACTCGGATGATCGGAGGTGAGAACGTCAGCGTGGATGTTTGGCCGTGGCAGGTGTCGGTGCTGTACCGGCCCGATCCATCTGCCCCGTTCACTCAAGTCTGTGGTGGAGCTATTATCGACAAATACTGGATAATGACTGCAGCTTCATGTGCAAATGTGAAGGATCAAAGCAAACTTTTGATCCGAGCGGGAAGCAGTAGACTGGATGTTGATGATGAGTTCACACAGAAGTCAGAAGTCGCCAGAATTATCACACACGAACGATTCAATCCTGTCACTCTGCGGTACAGTATCGCTCTTTATCGAATGAAGACGCCTTTTGTGTTCAGTGAGTTCGTGAGTCCCGTCTGTGTGCCTGATGACGCGGCTGCGGATCACAAATATGAGTCCTGTCACATCACGGGATATAACGCTCAGCCTGGCGGTGATCTTGGCGCACTGCAAGAAGCAAATGTGTACATAATGTCACGGTCACTGTGCAACAAACCAGAGTACTGGAACTTCTCTGTGGCAGCGGACATGCTCTGTGTCGGCGAGTTCGGTGGAGGTGTGGACGGATGTAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_10328133_10329110.mRNA True 798 mRNA 0.50 4 10328040 10329110

Neighbor

gene id symbol gene type direction distance location
CI01000001_10321783_10325266 NA coding upstream 2735 10321647 ~ 10325305 (+)
CI01000001_10150798_10152858 MIPA coding upstream 175102 10150373 ~ 10152938 (+)
CI01000001_10141190_10146911 PTGES3, PTGES3A coding upstream 179982 10141190 ~ 10148058 (+)
CI01000001_10093069_10104108 RND1B, RND1, RND1A coding upstream 222341 10092902 ~ 10105699 (+)
CI01000001_10072627_10081119 CACNB3, CACNB3A, CACNB3B coding upstream 246861 10072627 ~ 10081179 (+)
CI01000001_10395420_10396473 NA coding downstream 65741 10394851 ~ 10396705 (+)
CI01000001_10420931_10426716 NA coding downstream 91208 10420318 ~ 10427147 (+)
CI01000001_10525795_10530510 WNT1 coding downstream 194152 10523262 ~ 10530543 (+)
CI01000001_10538498_10539667 RPS26 coding downstream 209278 10538388 ~ 10539846 (+)
CI01000001_10573770_10582123 LMBR1L coding downstream 244660 10573770 ~ 10582238 (+)
G18884 NA non-coding upstream 7965 10304931 ~ 10320075 (+)
G18873 NA non-coding upstream 67326 10223879 ~ 10260714 (+)
G18902 NA non-coding upstream 75386 10252108 ~ 10252654 (+)
G18890 NA non-coding upstream 102512 10224926 ~ 10225528 (+)
G18870 NA non-coding upstream 116594 10211229 ~ 10211446 (+)
G18880 NA non-coding downstream 7777 10336887 ~ 10338149 (+)
G18878 NA non-coding downstream 10927 10340037 ~ 10344121 (+)
G18876 NA non-coding downstream 61578 10390688 ~ 10391598 (+)
G18882 NA non-coding downstream 73120 10402230 ~ 10403910 (+)
G18951 NA non-coding downstream 102847 10431957 ~ 10433760 (+)
G18872 NA other upstream 46671 10271146 ~ 10281369 (+)
G18896 NA other upstream 86548 10239900 ~ 10241492 (+)
CI01000001_09435836_09436037 NA other upstream 889977 9435836 ~ 9436373 (+)
G17354 NA other upstream 1087363 9234463 ~ 9240677 (+)
G18937 NA other downstream 145874 10474984 ~ 10476389 (+)
G19039 NA other downstream 521814 10850924 ~ 10853983 (+)
G19314 NA other downstream 1172084 11501194 ~ 11558673 (+)

Expression


Co-expression Network