CI01000001_10420931_10426716


Basic Information

Item Value
gene id CI01000001_10420931_10426716
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 10420318 ~ 10427147 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000001_10420931_10426716.mRNA
TTTTAAAAACGCAGTGCATTCAGAGCTCCCACACCTTTCAGCCAGTGGATTTCCATGATTTTTGCATTTACATTTATATTTGCATTGAATCATTAAGAGGAAGCTTTTATCCAAAATTACTTACAAATGAGGAGTCATAGCACATCATACACGAACAAATATTATTAGCAGTACCCAAGTAAACAATAACTTTTCCATAACTCAGATTTTTATAACATAATAATAATAAAAACTAGATTTTTAAAAATCGTTTTATAGAAACAGGATTAATTTATAAGCTATGAAATATTTTAGAGCATTTATATTCACTATAGAAATGTCCATGATTTTTCAGGATGTTATTCATTTTAGTGGCTTTTCAAATTCACATTTTTTCCCCAAAATCCCTGTGAAATACATGCATTTTTTTTAATCAAAGCCTGGTTCCTCAGGATCAATTCGGTCTGACATGGGGACAAGCAGCATCCTGCTGTTAACTTGGATTTCTCCTACTCAGCAGGTGGACGGTGTAGCGAGGTCCGGCTATAATCTGCCTCAGGCGTGCACTGTTTGATGCTGTCTGCTAGGAAACTGACAAAACAAACTGTATTAATAGCTCCAGCTGGAGCCAAGAATGAGGAATCTGGAGAGTGAGCTGCCAGAGAGTAAGGGAGACCCCACAAAAAGGGAGCGACGGAAAAGTGGGGCAGGGAGCAGAGAATGGAACGAATGGTTTTGGAGGGTGTTCGGTAACTCGCAGAGCCCTGAACGAGCAGCAGTGTTCGCGGAGACTTCGGTGGAAGACCACTGCCAGTCTGACAGCCTCACAGTCGCCTCATAAAAGTTACTCTCGATCATTTTTGACGAATATAAATAACGCTAGGACATTGTTTCACATTCAGACAATCATCTATTTCACATTTTTGACAAAATAAGAATGTTTACAAACTTACCACAGCGCCCCTCTATCCCACTCTCTCTCTCTCTCTCTCTCCTCTCTTGGAATCTGACACGCCCCTCCCCGTGAAGTATCGCGAGATTTTGGCGTCACATAGCCCGAGTTCCTCACCTGGGGTGTTTATGATCCTGTCAACTCGACATTCTTGATGCTTTTACTTTCTGTATGATGATACGGATTCATGATGATAAAGAATTCTAGCTCATATATTCTCTGACTGTAATAATGGTAAAGATTTTGGCATGTTAATATGAATGTTCTTAGTCTAAAATAGATTATTTTTAACTGTCTAGAATTTATCTGTATTTCGTAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000001_10420931_10426716.mRNA True 1251 mRNA 0.39 2 10420318 10427147

Neighbor

gene id symbol gene type direction distance location
CI01000001_10395420_10396473 NA coding upstream 23845 10394851 ~ 10396705 (+)
CI01000001_10328133_10329110 NA coding upstream 91208 10328040 ~ 10329110 (+)
CI01000001_10321783_10325266 NA coding upstream 95013 10321647 ~ 10325305 (+)
CI01000001_10150798_10152858 MIPA coding upstream 267380 10150373 ~ 10152938 (+)
CI01000001_10141190_10146911 PTGES3, PTGES3A coding upstream 272260 10141190 ~ 10148058 (+)
CI01000001_10525795_10530510 WNT1 coding downstream 96115 10523262 ~ 10530543 (+)
CI01000001_10538498_10539667 RPS26 coding downstream 111241 10538388 ~ 10539846 (+)
CI01000001_10573770_10582123 LMBR1L coding downstream 146623 10573770 ~ 10582238 (+)
CI01000001_10582439_10582802 NA coding downstream 155231 10582378 ~ 10582821 (+)
CI01000001_10590766_10595793 DHH coding downstream 163289 10590436 ~ 10596238 (+)
G18882 NA non-coding upstream 16408 10402230 ~ 10403910 (+)
G18876 NA non-coding upstream 28720 10390688 ~ 10391598 (+)
G18878 NA non-coding upstream 76197 10340037 ~ 10344121 (+)
G18880 NA non-coding upstream 82169 10336887 ~ 10338149 (+)
G18874 NA non-coding upstream 84402 10284763 ~ 10335916 (+)
G18951 NA non-coding downstream 4810 10431957 ~ 10433760 (+)
G18967 NA non-coding downstream 7072 10434219 ~ 10434542 (+)
G18968 NA non-coding downstream 8623 10435770 ~ 10435995 (+)
G18969 NA non-coding downstream 9506 10436653 ~ 10436873 (+)
G18929 NA non-coding downstream 10179 10437326 ~ 10440371 (+)
G18872 NA other upstream 138949 10271146 ~ 10281369 (+)
G18873 NA other upstream 159604 10223879 ~ 10260714 (+)
G18896 NA other upstream 178826 10239900 ~ 10241492 (+)
CI01000001_09435836_09436037 NA other upstream 982255 9435836 ~ 9436373 (+)
G18937 NA other downstream 47837 10474984 ~ 10476389 (+)
G19039 NA other downstream 423777 10850924 ~ 10853983 (+)
G19314 NA other downstream 1074047 11501194 ~ 11558673 (+)
G19395 NA other downstream 1254175 11681322 ~ 11681817 (+)

Expression


Co-expression Network