G146469 (LOC107587225,LOC107731971,LOC107704804)


Basic Information

Item Value
gene id G146469
gene name LOC107587225,LOC107731971,LOC107704804
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 14088262 ~ 14090520 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU216313
gcacgtattacatattttattattcagtattttcatAACAACAGTTCATAAGATTAACTGAGATCATTATATCGTATTGTATAATAAGGTCATTTATAGTAATGCATGCAAGACTATTGTAATGTAACACATCAGGAATACTTCGAActataatattattagtatagaTTCATTTTCGTAAATGGCATCTAATTAAGCAATAAcattatcaataaaaaaaacctttataatCAACTCAAATATGGAATCCTTGTTTCTTATCTTTTTTCTGACAGGTCCTTTTCTTTACATCCCAGCCAATACTTGCCAATGGATCTTGGGTAAGGAGGGTTTACGTAGTCAATCCGTTTAGTCTGCAGGTCCACCCTGTAATATTTATCTTCTTAAAGAAGTAGACATTCTGCACAGGTGTGGCCTTTTCTTGGACAAGCTCCACATCTGTGTAGTCATCCAGGTCATAGCTCATGTCAAACCAAAATGGACGTCTTCCACGGCCCTTTCTTTGGTTTCTACCACGCTTTTCTGCTCCATAATACCtacataacaaatatttattcatgcagtATAATCTATACATATACTATACATACACAAGGTATACATGTCCTCTCAACAAACCTTTCCTCATAGTCTAACCCAAAGTCTTCCCAGAACAGCGAGCGGCTCACTCTGGCCCCTTGACGCCTGTTCTTCTTTCTCCGTCCGGTTCGGCCCCTGCTCAGGCTTGTTGCTGGAGACGGTGAAGGACCAGGGCTGATATACAGTCGGCCAACCATTGCTGCATCTATGGGAGGTTTGATTCCAATCCAGTCTTTCGAAATGAAACGCGGCCCTTTGTGATGCCCGTTAA

Function

NR:

description
PREDICTED: vitronectin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU216313 True 850 lncRNA 0.39 2 14088262 14090520

Neighbor

gene id symbol gene type direction distance location
slc13a2 slc13a2,LOC107713211,LOC107581931,LOC107704803,LOC107675208,LOC107587224 coding downstream 8863 14072632 ~ 14079399 (-)
cryba1b cryba1b,LOC107581934,LOC107731981,LOC107713158,LOC107587221,LOC107704801,LOC107675182 coding downstream 36804 14048052 ~ 14051458 (-)
cpdb LOC107675205,LOC107587220,LOC107731961,LOC107713140,LOC107578777,LOC107581996 coding downstream 41466 14038413 ~ 14046796 (-)
c21h17orf97 LOC107731962,LOC107713141 coding downstream 63672 14018513 ~ 14024590 (-)
ccdc92bb si:ch211-274p24.4,LOC107697332,LOC107731968,LOC107713213,LOC107675210,LOC107577773 coding downstream 82624 13997915 ~ 14005638 (-)
ddx52 ddx52,LOC107661753,LOC107713207,LOC107704808,LOC107731976 coding upstream 83276 14173796 ~ 14179360 (-)
hnf1bb hnf1bb,LOC107731964,LOC107713205,LOC107587298,LOC107581926,LOC107661752,LOC107704798,LOC108431320 coding upstream 96357 14186877 ~ 14196071 (-)
heatr6 heatr6,LOC107704811,LOC107713138,LOC107731958 coding upstream 110758 14201278 ~ 14214738 (-)
pigs pigs,LOC107581923,LOC107661745,LOC107704812,LOC107587228 coding upstream 137242 14227762 ~ 14233061 (-)
aldocb aldoc,LOC107581922,LOC107661747,LOC107587231,LOC107704813,LOC107731973,LOC103040804 coding upstream 143028 14233548 ~ 14242625 (-)
G146468 NA non-coding downstream 80 14084506 ~ 14088182 (-)
G146378 LOC107675202,LOC107581945,LOC107587211,LOC107697354,LOC107726795 non-coding downstream 264953 13819104 ~ 13823309 (-)
G146373 NA non-coding downstream 288691 13799336 ~ 13799571 (-)
G146312 NA non-coding downstream 403058 13683037 ~ 13685204 (-)
G146284 NA non-coding downstream 503465 13584454 ~ 13584797 (-)
LOC122326919 NA non-coding upstream 23273 14113793 ~ 14115899 (-)
LOC122326813 NA non-coding upstream 33652 14124172 ~ 14125723 (-)
G146492 NA non-coding upstream 40113 14130633 ~ 14130908 (-)
G146494 NA non-coding upstream 40633 14131153 ~ 14131525 (-)
G146495 LOC107673793,LOC107693849,LOC107571542,LOC107733475 non-coding upstream 41087 14131607 ~ 14132148 (-)
LOC122326201 cox7b,LOC107713147,LOC107582003,LOC107675192,LOC107697350,LOC107726769,LOC107598778 other downstream 220619 13866415 ~ 13867643 (-)
LOC122326016 NA other downstream 986741 13100116 ~ 13101521 (-)
G146159 NA other downstream 1004768 13083124 ~ 13083494 (-)
LOC122326748 LOC107739910 other downstream 1605098 12482213 ~ 12483164 (-)
G145910 NA other downstream 1712717 12374846 ~ 12375545 (-)
LOC122326208 NA other upstream 41734 14132254 ~ 14139158 (-)
dynll2b dynll2a,LOC107554284 other upstream 128087 14218607 ~ 14222690 (-)
srsf1b srsf1b,LOC107704814,LOC107587230,LOC108278759,LOC108415197,LOC107661749,LOC103029385 other upstream 132623 14223143 ~ 14227266 (-)
G146556 LOC107673793,LOC107693849,LOC107571542,LOC107733475 other upstream 169165 14259685 ~ 14263667 (-)
stc2b stc2b,LOC107587244,LOC107713187,LOC107581911,LOC107661727,LOC107727250,LOC108441629 other upstream 822569 14913089 ~ 14920554 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
tiger barb (Puntius tetrazona) G145073 pipox,LOC107664955,LOC107585605 non-coding NC_056719.1 CM032088.1 9598336 ~ 9600929 (-)