G146378 (LOC107675202,LOC107581945,LOC107587211,LOC107697354,LOC107726795)


Basic Information

Item Value
gene id G146378
gene name LOC107675202,LOC107581945,LOC107587211,LOC107697354,LOC107726795
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 13819104 ~ 13823309 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU216140
TAGAGCATTTTCGTTCTTTAATAGACTAATATCCAAGAACATCAGTGCTTTCACAAAAAAGGAAATTGGCACTTGGAACATTCAATTAACAGTGTGATCTCAGGGAAAGGAAAACATTTCTCATAAGTAACATAACATACATATCTCcctttatttaacaaatacagATGTTTTGGCTATCAACTGTGTCCATAAATCCACATTTCTGAGGAAAATGTAAACTTCTAacagatttattaaacaaaaaaccctTTCAAATTGTTAACTTAATGcactaaaaactgaaataaacaaaactaaaacctaTATAGAATGTACTATAAATCTatgcaaaaaatgtgaaaactaatttaaaatgtcaacacaAATTATAGTAGTACCTCAGCGATGCTAAAATAAGTTCTCTGATCACAAATCATCCATTTAGCAGATATGATATGTAATGTAAGTTTAAGTTTAATGAAATTATTCATATAAGACATTTGTGACAGAACAGGAACAGCATAATTTTTCAGAACATATCAATCTCATTGGAAGCTCTGTTAAGATCCATGTGAGACAAATCTTTAAATGAAAGCTATATAGATTTGTTATGGAAGACCCTAAAGACTTCTGGTAtattaaacacaattaaagCCTAATTAAAAGTACTAAAGagcaaataacaataattttctTCAGGTGAGATACTTCACTGATAGTAAATGCTTTTAAGTCTGTGtggcaaaacacaaaacactcaacatgaataaaacagctCACAGAgctgtattaatacatttttttctaattttattcaAGTTTAAATATGACGCAAATatgaagcaacaaaaaaaaattaaactagaTTCATGCATCAGTTTAATATTTACGCAACTGACTTTCATGTGTGACTGATTATATGTAAGGTATATTCACACTAAATGGATATTTGAGTATATTATATCCATTTGGTATAGAAATTGTCATGATccctaaaataaagaaaaatttatATAAGACATACACGAATGTACAATTCTGTAATTATGAATTTCAATACCAGTGCTTATgttcataaaatgtgtttacatttaaatgcaaaattgtTGTAACCAGCACAAACAGATCTAAGATAATTAGAACcacactgaatatatatatatgaaaaaaaaatcatgaatgatgaaaaaaatcatgcaatttGGCTTGAAGAACAACAATGATGTATCATGTTTTGGTTTAGAATATAACACATATATTTCGCATATAAACCAAAGCCTGTGGCTTCTGTGGCACATTCTCACTAGCGCAAATGCTAGACAGGAACATGAGTGCTGGCTACAGGCATAGATACGAACACATATATACTCCACATATTCTCTGACACATTTCTTCACGCATACAGTTCTCTCTTGgtctaaaataaacacaaagatAAACCACACTTGAAATTATCTTCAGTTCTTGCTACCTCTGACATAAtgttgttacaaaaaataacCTGTTGCTTTACATGAGATTGTGACGTTCAGCCATATCCTACAACCCACTGAAGTTGCCAGCATTCCAGCTCATCTCTTAACGCTCATCATCTGCTATAGTGAGTTGTCAATGCTATCTTCTTATCAGTCTTTCACCGCCAACCAAGCCTGAAACTGATCTGCAGTCCGTGCCAGCTGTTATCAATGCTGAGCTGGGTGCTCCATCAGCGCAAAAGACAGCCTGTCAGGACATTGTGGGATTGATTGTTGCGGCTTGAGTAAGAGGCCCAAGAGACTTGAGCAGAGCTCCAAGCCAAGGCAGCCACTGCAGCCGTGGGTAGTGGTGAGAGAGGTCGAAGGAGGAGTGAAAAGGTACACTGAAATGGTGAGAAGGCTGCATGGAGTGTGAAGGCAGGAGGACCCTTTGCGACTTGAAAAACACCAGTGCAATCCACGAACCGATCAACTACACACACATAGCCTGCACACTCTGTTCGGAGTGAGAGCCACATTAGGATAAGTGCTTGGGAACCAGTGCATCCCTAACATTTGGTTACCACTATACATGTCTTCTTTTCTGAAAGCGCTCACTTTTCTACCACTATCTCCTCATATTTTGGCGGAGGATCACTGTAGGGTGCTGTCGTCTCGTCGCTGCTGCTCTCTAAGTGGCCGGTAACTTCCTCGTAGGATGGCGGTGGCGTCGCCCCGGACAGGTGGGAAGCCACAGACAAAGATGAATCTTGTACGTACAAGGAGCGATTGTTCTGAGAGTGGCTGGTGTGATGATGGGCGTCTTGAGGTGTGACCGAAGCCCCGCCCCTCTCTCCGCTGCTGACCACCACACTGGGCCTGTCATTGGCGTGAGAGTTCTCTGAATGCGAGGGAGGGTCGCGGTGCACCAGGATGCGCGGGAGGCTGCGGGCGTTCCGGTTTGCCAGATATCGGTTCTGGGTGTAGGCCGGACGCCGGCGAGTGGCCTTCTGCAGCTGACAGCGCCAGATGAGGAAGAGCGCAATGATGATGAGAAGAGCCACGCCCAGCAGGGGCACCACCATGTACACAGTGTCCGGGCGCTCCGAGCGGGAATCGGCATTACTGTTCACTGTGTAGATGCTGCGATTTTTCCA

Function

NR:

description
PREDICTED: transmembrane gamma-carboxyglutamic acid protein 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU216140 True 2593 lncRNA 0.40 3 13819104 13823309

Neighbor

gene id symbol gene type direction distance location
cldn2 cldn2,LOC107675184,LOC107738380,LOC107587291,LOC107697356,LOC107582022,LOC107726767 coding downstream 17111 13799768 ~ 13801993 (-)
klf8 klf8,LOC107675193,LOC107581946 coding downstream 24574 13762475 ~ 13794530 (-)
pou4f4 zgc:158291,LOC107697335,LOC107581947,LOC100711063,LOC107675183,LOC107387148,LOC107587290 coding downstream 119893 13696497 ~ 13699211 (-)
LOC122326187 LOC107732318,LOC107692787,LOC107582024,LOC107726770,LOC107697336,LOC107587205 coding downstream 226420 13590437 ~ 13592684 (-)
rbmx2 rbmx2,LOC107692788,LOC107581955,LOC107732309,LOC107697337,LOC107587203 coding downstream 229471 13586310 ~ 13589633 (-)
amot amot,LOC107581942,LOC107675187,LOC107738375,LOC107697351,LOC107587213,LOC107726781 coding upstream 5900 13829209 ~ 13856805 (-)
pgk1 pgk1,LOC107675189,LOC107697352 coding upstream 34188 13857497 ~ 13864923 (-)
pgrmc1 pgrmc1,LOC107713219,LOC107581940,LOC107726794,LOC107697348,LOC107675190 coding upstream 45731 13869040 ~ 13870971 (-)
mrps17 mrps17,LOC107713160,LOC107581941,LOC107587217,LOC107697349 coding upstream 53123 13876432 ~ 13877409 (-)
mntb LOC107581939,LOC107675180,LOC107726777,LOC107713217,LOC103362281 coding upstream 121354 13944663 ~ 13961672 (-)
G146373 NA non-coding downstream 19533 13799336 ~ 13799571 (-)
G146312 NA non-coding downstream 133900 13683037 ~ 13685204 (-)
G146284 NA non-coding downstream 234307 13584454 ~ 13584797 (-)
G146155 NA non-coding downstream 756371 13062086 ~ 13062733 (-)
G146153 NA non-coding downstream 757482 13060420 ~ 13061622 (-)
G146468 NA non-coding upstream 261197 14084506 ~ 14088182 (-)
G146469 LOC107587225,LOC107731971,LOC107704804 non-coding upstream 264953 14088262 ~ 14090520 (-)
LOC122326919 NA non-coding upstream 290484 14113793 ~ 14115899 (-)
LOC122326813 NA non-coding upstream 300863 14124172 ~ 14125723 (-)
G146492 NA non-coding upstream 307324 14130633 ~ 14130908 (-)
LOC122326016 NA other downstream 717583 13100116 ~ 13101521 (-)
G146159 NA other downstream 735610 13083124 ~ 13083494 (-)
LOC122326748 LOC107739910 other downstream 1335940 12482213 ~ 12483164 (-)
G145910 NA other downstream 1443559 12374846 ~ 12375545 (-)
LOC122326615 LOC101885612 other downstream 1657437 12158672 ~ 12161667 (-)
LOC122326201 cox7b,LOC107713147,LOC107582003,LOC107675192,LOC107697350,LOC107726769,LOC107598778 other upstream 43106 13866415 ~ 13867643 (-)
LOC122326208 NA other upstream 308945 14132254 ~ 14139158 (-)
dynll2b dynll2a,LOC107554284 other upstream 395298 14218607 ~ 14222690 (-)
srsf1b srsf1b,LOC107704814,LOC107587230,LOC108278759,LOC108415197,LOC107661749,LOC103029385 other upstream 399834 14223143 ~ 14227266 (-)
G146556 LOC107673793,LOC107693849,LOC107571542,LOC107733475 other upstream 436376 14259685 ~ 14263667 (-)

Expression


Co-expression Network