G146536


Basic Information

Item Value
gene id G146536
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056719.1
NCBI id CM032088.1
chromosome length 19199999
location 14142468 ~ 14153410 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU216434
ttccaGTTTGGTGGACCTACCATTGCGATTTGTGAGAGCAGCTGAGTTCAGAAGCTCTTGAGTCTTGTGGCAGAATCAGACCTTTGAAGATTCAGCTCTGTGTTAAACTTCTATACAGTTTCAATTTTCATGAAAGAATATGTATATTTTGCCCCTGAAGTTGACATGATTAGATTAATTGATTCAATGATTGATTAAATTTCAATCATTTGGGTTTCAGTTTAGAAATGTTATGTTTGACTGTTGATAATGGTTTAGATATGCaattaaacattataacatTAGTTAGCTCTACAGTTAATAATGCACCATTTGTTACAAGGATCAAAAGTgcatttagtgttattttatgGGAAGTAATCAGAAGTAACTGCTCATGTTATTTGCTTGCTCATTCTCAGTGGGTTGTTCTGTGGGCTTTTGGTTTTTGATCATACTGCATcctgtgcatgcatatataacaGTTTCATTTGTAGGTAACCACCACATCACACACACCGTTTTATATAACAAtgttacttaattttttttttctgtactatGTTCACATTTATCATGTTGATTATGAGACCAAAAGGAGATAAACCACTACTCTATAAATTCAGAACATGGCGACATCAGCAAAATCCGGCTAGGACTGAGGAGACAGACAGGGAAGTGACAGataagtttgttttaataaaataaatagcttaaTATGATTTTATGGCTATTATTTGTAAAGCTTGTACTTGGCATGTAATAAatgtgctgttaaaaaaaacaaaaaaacaaacaaacaatatttagttgctaaaataaaagtttgtgacTGCTAATTCTGTCTAAAAATAATTctcatataaaacatttaatatatagttaaaCAATATGAAAGTTGCTTAATTTATAAAGTGGAGTAATTAtttgttacaattttatttgtcatctattttttattcatataaatttcaTGCTGCTAGTCTTTGGAGGACTTCCGTTAGAAACCATTTTGTTCTCAGATTGACAGTTGTTATGGTAAGCTACGTGTACAGTATTTTTATCAAAACCTTTATTATTCAATTGTTACTAATAAAGAAGATAGGATAATATTGAGTATCTATTGAAGCTTTTCATATATGTAACAATGGCAGCAGTGATACATTTAGgttgctacaaaaaaaaaaagaaaaagattgttAGTAACTTCCGTTAGATGGTGCACCATTTTTTGTGAGTTGTGGAAAACAGTTGTTATGGTAGGCTACGTATACCatggttaatatttttatcGTAATTACTCaatcattacttttaaaaagatagGATAATATTGAGCAACTATTGaagctttttttatatgtaacaaTGTCAGCAGTGTTATCATTTGGGTTGCTACAAAAACGTCGATTGTTAGCCTATTAGCCATGTGGCTTCTGTAAACCGCTGCATGTCACATCTGTGATTAGTCTAGGGTCTATAATTtcctattatttaaaaattcaatttttgTTGCCTTGTTTTTGGCCAATTGTTCATCTGTCGAGATCACTCTTAACCAATTAACTTGAGGTATATAATGAGGCCTTTTGAATATTACAGTTgtgaataaagttttaaaaatgctttatgtaCAACCTGTGGTGTGGTggttaaaattatgtttaaagtTTGGAAACCTACAAGGCCCGATCCATGAGTTATGGTCAAGATAAACCAAAAAATTCTTAAccttaattttttgtttttagtaaagTCAAGGCAGGTCTATGATAAGTCATGCAGGTTAAACGTGAATTTCTTCTTTTGGAGGAGTTCAAGTGTTTATTATGATGGTAAAATCATACTCTGGATTGAGGTCCTGCtaactatttttacatttgtttttaggGTGCTTTACACTGTATCCCACAACAACCCTCAGTGGGTCAAATCAAGTCCCCTGTCCAGTGTGTGGAGAATCCTGAAGGATCAGGTGGAATCATAATAAATGACCAGGAGACGTTCTGCATGAACAAACAACATCTGGTGGCAGTTCTTCTCTCTAGAGGTGAAAAGACCAGTTCTGTTGTAATGGCAAGTGAAGACAAGAAAGGAATGGCCCTAACATGTCACCCTTTATacttcaaataaagaaaacttacCATAATCTGTGCCTTCTGTGTCTTTAAAGAAACCGATGTCGTAACTTAGAATGTCAATATGAATTTTTTAAGTGCTTATACTCATGCTACAGACTAAGTCAGTGATAAGTTTCTTTCACAATGTAAATGTCCTTTGCTTGGATACtctatgtaatttattcatttgaagaACTGTAAAAGGTGAAAAAAATTGACCACATCCGTG
>TU216437
AGTTTCATTTGTAGATAACCACCGCATCGCACACATAATTTTATTGAACAATCAATCAGGGTTTTATGTTCAGTGTCTCAGCAGAATATGAGACCAACATATGGAAGAAACTTCAGAAGATTCCACTAAACCACTAAAGGATGTAAACCAAAGGATGTACTTTCCATAAATTCAGGACAAGAAGACAGCAGCAAAATTTGGTAGTGACTGAGGAAACAGTGAAGTGACaggATACAACAGACTGTCTCCCTCATCAACCCTCAGTGGGTcaaattaagTCCCCTGTCCAGTGTGTGGAGAACCCTGAAGGATCAGGTGGAATCATAATAAACGACCAGGATACGTTTGCCATGAACGAACAACACCCGgtGGCAGTTCTTCTCTCTAGAGGTTAAAAGACCATTTCTGTTGTAATGGCAAGTGAAGACAAGAAGGGATGCTTCCCAAGACCTTAACGTCTTACCCTttatacttcaaataaaataattttac

Function

GO:

id name namespace
GO:0006950 response to stress biological_process

KEGG:

id description
ko03070 Bacterial secretion system
ko02024 Quorum sensing

RNA

RNA id representative length rna type GC content exon number start site end site
TU216434 True 2328 lncRNA 0.33 3 14142468 14145081
TU216437 False 492 lncRNA 0.40 4 14146766 14153410

Neighbor

gene id symbol gene type direction distance location
slc13a2 slc13a2,LOC107713211,LOC107581931,LOC107704803,LOC107675208,LOC107587224 coding downstream 63069 14072632 ~ 14079399 (-)
cryba1b cryba1b,LOC107581934,LOC107731981,LOC107713158,LOC107587221,LOC107704801,LOC107675182 coding downstream 91010 14048052 ~ 14051458 (-)
cpdb LOC107675205,LOC107587220,LOC107731961,LOC107713140,LOC107578777,LOC107581996 coding downstream 95672 14038413 ~ 14046796 (-)
c21h17orf97 LOC107731962,LOC107713141 coding downstream 117878 14018513 ~ 14024590 (-)
ccdc92bb si:ch211-274p24.4,LOC107697332,LOC107731968,LOC107713213,LOC107675210,LOC107577773 coding downstream 136830 13997915 ~ 14005638 (-)
ddx52 ddx52,LOC107661753,LOC107713207,LOC107704808,LOC107731976 coding upstream 20386 14173796 ~ 14179360 (-)
hnf1bb hnf1bb,LOC107731964,LOC107713205,LOC107587298,LOC107581926,LOC107661752,LOC107704798,LOC108431320 coding upstream 33467 14186877 ~ 14196071 (-)
heatr6 heatr6,LOC107704811,LOC107713138,LOC107731958 coding upstream 47868 14201278 ~ 14214738 (-)
pigs pigs,LOC107581923,LOC107661745,LOC107704812,LOC107587228 coding upstream 74352 14227762 ~ 14233061 (-)
aldocb aldoc,LOC107581922,LOC107661747,LOC107587231,LOC107704813,LOC107731973,LOC103040804 coding upstream 80138 14233548 ~ 14242625 (-)
G146495 LOC107673793,LOC107693849,LOC107571542,LOC107733475 non-coding downstream 10320 14131607 ~ 14132148 (-)
G146494 NA non-coding downstream 10943 14131153 ~ 14131525 (-)
G146492 NA non-coding downstream 11560 14130633 ~ 14130908 (-)
LOC122326813 NA non-coding downstream 16745 14124172 ~ 14125723 (-)
LOC122326919 NA non-coding downstream 26569 14113793 ~ 14115899 (-)
LOC122326149 NA non-coding upstream 16318 14169728 ~ 14172799 (-)
G146622 dach2,dacha,LOC107581921 non-coding upstream 288589 14441999 ~ 14442891 (-)
LOC122326073 NA non-coding upstream 717838 14871248 ~ 14873810 (-)
G146753 NA non-coding upstream 799801 14953211 ~ 15001740 (-)
G146803 NA non-coding upstream 1015266 15168676 ~ 15168913 (-)
LOC122326208 NA other downstream 3310 14132254 ~ 14139158 (-)
LOC122326201 cox7b,LOC107713147,LOC107582003,LOC107675192,LOC107697350,LOC107726769,LOC107598778 other downstream 274825 13866415 ~ 13867643 (-)
LOC122326016 NA other downstream 1040947 13100116 ~ 13101521 (-)
G146159 NA other downstream 1058974 13083124 ~ 13083494 (-)
LOC122326748 LOC107739910 other downstream 1659304 12482213 ~ 12483164 (-)
dynll2b dynll2a,LOC107554284 other upstream 65197 14218607 ~ 14222690 (-)
srsf1b srsf1b,LOC107704814,LOC107587230,LOC108278759,LOC108415197,LOC107661749,LOC103029385 other upstream 69733 14223143 ~ 14227266 (-)
G146556 LOC107673793,LOC107693849,LOC107571542,LOC107733475 other upstream 106275 14259685 ~ 14263667 (-)
stc2b stc2b,LOC107587244,LOC107713187,LOC107581911,LOC107661727,LOC107727250,LOC108441629 other upstream 759679 14913089 ~ 14920554 (-)
G146999 LOC107603265,LOC107742454,LOC107661689,LOC107692966,LOC107578430,LOC107739203 other upstream 2000954 16154364 ~ 16162231 (-)

Expression


Co-expression Network