G12540


Basic Information

Item Value
gene id G12540
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 63634 ~ 64817 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU13889
GCGGGATTGTGAGGGCATCTCATCCAGATTTGGTTGAGTAAAGGTCCTGTGGAAATCGCCACTGCTCTCTGCATCTTGGCTGCCAATCATTATAGTTTGCACTTCCTGTCCACTGTTTTTTAACCCAGACAGAGGCTTTAGCAGGATCACGCTGGAGTCTGATAGGCCGTCCAGTGTAGATCTGTCAGGTCCCTTTTCACCATGTTCAGTTTCAGTTACCTCTACTACAGGAGTTAGTTCAGTGGGAATGAAATCATCTTGAGATATTCTAGATATTTTGGAGTTCTGGCTAAGAGGTGATGCTGTTGTCTTTGTGATTTCTGGTATATCTTTGGATTTGGGATGAAAATTCTTCATAATATGTGGAGTAAAATCTGTGTTCACACTTGCACCAGACAACAGAACTGGAGTCAGTGTGATTTCAAATCCAGTTTTTTCAATCTGCACGTGATCTTCTTTGTTGCTTTTTGGCGAAATCATCAAATTATCGTCATTTTTATCTGTTAATCTCAAGCTTGGTGTTCCTGCAGTGTTGGCAAATGGCATCTCACTTTGCCCTTCCTCCATGTCTAGACGCTGTACCTGACTGTCTTTCCTTGCAGTTTGCAAACGGTCCTCACGTTTCCATCTTCTCAGACGAGCACTACTTCCCCCGAGCTCTAAGCACATGCACAGGAAGAGCGATGCTGCCCAGATACGGCCACTCATCGTGCCTCACTTCGTTATTAGTCACAATGTTTGCCACGGGGGAAAGAACAATAAGATCGACCTTCACTCACGCTCTGTCTCGCTGAGTGGATGGCTGCTCCATTCATCTCCTCTTCTTAATTCCTTATTCTTCATGAGGCTCAGTGGTCATTTAGCATCTTATCCGCTTTTGAGGATTACATTTCTCTCTTTGGGTCAGGTTAAACACAGAGGGTGATTCCCATGGTTTGGGTCTGATTGGGCAAACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13889 True 957 lncRNA 0.43 2 63634 64817

Neighbor

gene id symbol gene type direction distance location
CI01000001_00089680_00091054 RNF146 coding downstream 24863 89680 ~ 91115 (+)
CI01000001_00205299_00213625 TGM1L3 coding downstream 140482 205299 ~ 213958 (+)
CI01000001_00231916_00237164 NA coding downstream 166338 231155 ~ 237540 (+)
CI01000001_00337674_00339265 NA coding downstream 272464 337281 ~ 339350 (+)
CI01000001_00343451_00343828 NA coding downstream 278634 343451 ~ 344399 (+)
G12494 NA non-coding upstream 41827 17375 ~ 21807 (+)
G12557 NA non-coding downstream 89847 154664 ~ 154908 (+)
G12559 NA non-coding downstream 97406 162223 ~ 162683 (+)
G12522 NA non-coding downstream 98978 163795 ~ 164525 (+)
G12568 NA non-coding downstream 118363 183180 ~ 183382 (+)
G12569 NA non-coding downstream 118631 183448 ~ 184567 (+)
G12614 NA other downstream 244327 309144 ~ 310941 (+)
CI01000001_00483853_00488761 VWA1 other downstream 413569 483853 ~ 488825 (+)
G13051 NA other downstream 978896 1043713 ~ 1045152 (+)
CI01000001_01668334_01670035 CAMK2N1B other downstream 1603203 1667762 ~ 1671167 (+)
CI01000001_03618075_03620436 NA other downstream 3551431 3618075 ~ 3621451 (+)

Expression


Co-expression Network