G12583


Basic Information

Item Value
gene id G12583
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 205672 ~ 205988 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU13938
AAAAAGTTATTTGCTTTACATGCTCATTTGTAGTTATTTTGAGGAATTTTTTCATTTATTTTTTATTACCCTATATGTCCAAAACTGTAAATTTTCACCAAAATCAACATTTGGTTAAAATTTCATGTTATAAAAGATGAAGTGCTTTGCAGGATATTTAAGACAATATTGGCTGATTAGATGGCAATACTGTTTGCCACATCTCAGACCTCAAATACATAAAATATTAACCATTATAGCCAGTAATTTTAAAGTAAAGAGTAAAGGAAACACTATACAGTACTTATTGAAACAACAGTTCTTTATTTGCCCTTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU13938 True 317 lncRNA 0.34 1 205672 205988

Neighbor

gene id symbol gene type direction distance location
CI01000001_00089680_00091054 RNF146 coding upstream 114557 89680 ~ 91115 (+)
CI01000001_00231916_00237164 NA coding downstream 25167 231155 ~ 237540 (+)
CI01000001_00337674_00339265 NA coding downstream 131293 337281 ~ 339350 (+)
CI01000001_00343451_00343828 NA coding downstream 137463 343451 ~ 344399 (+)
CI01000001_00351249_00352199 NA coding downstream 144563 350551 ~ 353522 (+)
CI01000001_00353909_00354838 NA coding downstream 147921 353909 ~ 354838 (+)
G12581 NA non-coding upstream 941 204515 ~ 204731 (+)
G12579 NA non-coding upstream 2695 202771 ~ 202977 (+)
G12570 NA non-coding upstream 20519 184902 ~ 185153 (+)
G12569 NA non-coding upstream 21105 183448 ~ 184567 (+)
G12568 NA non-coding upstream 22290 183180 ~ 183382 (+)
G12588 NA non-coding downstream 36929 242917 ~ 245117 (+)
G12604 NA non-coding downstream 77547 283535 ~ 283735 (+)
G12606 NA non-coding downstream 80071 286059 ~ 302497 (+)
G12611 NA non-coding downstream 97159 303147 ~ 303452 (+)
G12627 NA non-coding downstream 152161 358149 ~ 358382 (+)
G12614 NA other downstream 103156 309144 ~ 310941 (+)
CI01000001_00483853_00488761 VWA1 other downstream 272398 483853 ~ 488825 (+)
G13051 NA other downstream 837725 1043713 ~ 1045152 (+)
CI01000001_01668334_01670035 CAMK2N1B other downstream 1462032 1667762 ~ 1671167 (+)
CI01000001_03618075_03620436 NA other downstream 3410260 3618075 ~ 3621451 (+)

Expression


Co-expression Network