G12656


Basic Information

Item Value
gene id G12656
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 418962 ~ 419235 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU14052
GGGGCCGGGAGCAGCAGCTCATTTGCATTTAAAGGGACACACACAAAAACGGCGTGTTTTTGCTCACACCCAAATAGGGACAAATTTGACAAGCTATAATAAATGATCTGTGGGGTATTTTGAGCTGAAACTTCACAGACACATTCTGGGGACACCAGAGACTTATATTACATCTTGTGAAACGGGCATTATAGGTCCCCTTTAAAACAACATGAGGGTGAGTCAATCATGGCAGAATTTTCATTTTTGGTTGAACTATCCCTTTAAAGAGCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14052 True 274 lncRNA 0.47 1 418962 419235

Neighbor

gene id symbol gene type direction distance location
CI01000001_00400604_00401694 NA coding upstream 17038 400425 ~ 401924 (+)
CI01000001_00353909_00354838 NA coding upstream 64124 353909 ~ 354838 (+)
CI01000001_00351249_00352199 NA coding upstream 65440 350551 ~ 353522 (+)
CI01000001_00343451_00343828 NA coding upstream 74563 343451 ~ 344399 (+)
CI01000001_00337674_00339265 NA coding upstream 79612 337281 ~ 339350 (+)
CI01000001_00426295_00431004 IYD coding downstream 6830 426065 ~ 431232 (+)
CI01000001_00433013_00435064 NA coding downstream 13778 433013 ~ 435539 (+)
CI01000001_00436821_00439097 NA coding downstream 17586 436731 ~ 439752 (+)
CI01000001_00440891_00444667 HTR6 coding downstream 21656 440891 ~ 444983 (+)
CI01000001_00483853_00488761 VWA1 coding downstream 64618 483853 ~ 488825 (+)
G12648 NA non-coding upstream 2121 414496 ~ 416841 (+)
G12629 NA non-coding upstream 45477 372764 ~ 373485 (+)
G12628 NA non-coding upstream 58745 359969 ~ 360217 (+)
G12618 NA non-coding upstream 59206 358871 ~ 359756 (+)
G12627 NA non-coding upstream 60580 358149 ~ 358382 (+)
G12664 NA non-coding downstream 48867 468102 ~ 468433 (+)
G12674 NA non-coding downstream 85252 504487 ~ 504749 (+)
G12685 NA non-coding downstream 105239 524474 ~ 538363 (+)
G12686 NA non-coding downstream 120461 539696 ~ 545356 (+)
G12614 NA other upstream 108021 309144 ~ 310941 (+)
G13051 NA other downstream 624478 1043713 ~ 1045152 (+)
CI01000001_01668334_01670035 CAMK2N1B other downstream 1248785 1667762 ~ 1671167 (+)
CI01000001_03618075_03620436 NA other downstream 3197013 3618075 ~ 3621451 (+)
G15794 NA other downstream 4641983 5061218 ~ 5064704 (+)

Expression


Co-expression Network