G13180


Basic Information

Item Value
gene id G13180
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 1176644 ~ 1177048 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU14676
ACTGTAATTTACAAACAAGAAAATTTGAATGTAAACCAATAAATTCAACAATGCACACTACTATTAAAATCTGTTTTGTAACTTTAAAATATACTGACAACCACCATTATAATGCAGGTGGTAAACGACAAAGCCACATGAAGAATCAGAGTTCATCACAAATAGCTTTTACACGAGCTGAAGTATATACTTATATAAAGAAGGTGCACAGAGTGATTCACGCAAACGCAAAACACCATCATGGTAACCCACAACACTTACACAATGCAATAAACATTCATTAAACAACAGAAGAAGTAACATAAAACTCTAATGTACATAACTGATAACAAAAACTATTAAGAAACATGATTATTTAAACAAAATACTTTCAAATGTGGAGTGTCACACAGGGAATTGTGGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU14676 True 405 lncRNA 0.31 1 1176644 1177048

Neighbor

gene id symbol gene type direction distance location
CI01000001_01168378_01169553 NA coding upstream 7002 1167517 ~ 1169642 (+)
CI01000001_01088316_01091350 TSHZ2 coding upstream 85066 1088316 ~ 1091578 (+)
CI01000001_00483853_00488761 VWA1 coding upstream 687819 483853 ~ 488825 (+)
CI01000001_00440891_00444667 HTR6 coding upstream 731661 440891 ~ 444983 (+)
CI01000001_00436821_00439097 NA coding upstream 736914 436731 ~ 439752 (+)
CI01000001_01209204_01212045 PFDN4 coding downstream 32156 1209204 ~ 1212252 (+)
CI01000001_01248946_01251200 NA coding downstream 71898 1248946 ~ 1252096 (+)
CI01000001_01357469_01365104 NA coding downstream 180219 1357267 ~ 1365576 (+)
CI01000001_01504275_01507238 NA coding downstream 327227 1504275 ~ 1507494 (+)
CI01000001_01511371_01514291 NA coding downstream 334323 1511371 ~ 1514687 (+)
G13167 NA non-coding upstream 31671 1144750 ~ 1144973 (+)
G13166 NA non-coding upstream 31913 1144491 ~ 1144731 (+)
G13154 NA non-coding upstream 43691 1132634 ~ 1132953 (+)
G13059 NA non-coding upstream 50021 1078701 ~ 1126623 (+)
G13048 NA non-coding upstream 112337 1053125 ~ 1064307 (+)
G13187 NA non-coding downstream 8404 1185452 ~ 1185727 (+)
G13190 NA non-coding downstream 16256 1193304 ~ 1196821 (+)
G13188 NA non-coding downstream 20808 1197856 ~ 1200792 (+)
G13191 NA non-coding downstream 27115 1204163 ~ 1205074 (+)
G13434 NA non-coding downstream 109269 1286317 ~ 1286730 (+)
G13051 NA other upstream 131492 1043713 ~ 1045152 (+)
G12614 NA other upstream 865703 309144 ~ 310941 (+)
CI01000001_01668334_01670035 CAMK2N1B other downstream 490972 1667762 ~ 1671167 (+)
CI01000001_03618075_03620436 NA other downstream 2439200 3618075 ~ 3621451 (+)
G15794 NA other downstream 3884170 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 4109701 5279837 ~ 5287698 (+)
G15995 NA other downstream 4534837 5711885 ~ 5714951 (+)

Expression


Co-expression Network