G150829


Basic Information

Item Value
gene id G150829
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 8397978 ~ 8398696 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU223244
ACCTCCTTCAGCTTGTCACTAAGAACTTTAATTTCCTCTTCATACTTGTCTTCTTTTTCTGAGTACTGAAACTTTCTCTGCCTGAGCCTCTAGGGATTTAAGGTTGTTGGTAACGTTCTTCAATTCCTCCTCTAAATCACTAGCTTTGCTGGAAGCGTTTGAgaagaaaacaatgttttaaccGGTCAAGCAACAAACATCCACATCTTAAAGTGTGAGAACAGAAGTGTGAGAATAGACAGATGATACCATTCAGCGACTTCGGCTCTCTCCTCGGCTCGCTCCAGCTCCCCCTCGAGAATCACCAGTTTACGGGCCACCTGTAGCAGAGATGACGTTCGGATGAACAACTTCAAGCTTCGCACATCTGGAAGCTATGTTCCTTCAGGCGCTTGTAACCCACCTCTTCGTATTTGCGGTCGGCCTCCTCAGCGATGTGTTTGGCCTCCTTCAGCTGCATCTCCTGGATCTCCATCTTCTCCTCGTCCTTCATGGCACGGTTCTCGATTACCTTCATGCCT

Function

GO:

id name namespace
GO:0072359 circulatory system development biological_process
GO:0007507 heart development biological_process
GO:0008015 blood circulation biological_process
GO:0003013 circulatory system process biological_process

KEGG:

id description
ko04260 Cardiac muscle contraction
ko04261 Adrenergic signaling in cardiomyocytes
ko05410 Hypertrophic cardiomyopathy
ko05414 Dilated cardiomyopathy

RNA

RNA id representative length rna type GC content exon number start site end site
TU223244 True 521 lncRNA 0.47 2 8397978 8398696

Neighbor

gene id symbol gene type direction distance location
gpc1a gpc1a,LOC107715080,LOC107653615,LOC107665524,LOC107561905,LOC107588081 coding upstream 22586 8350241 ~ 8375392 (+)
gpc5b LOC107665526,LOC107561907,LOC107757472,LOC107653614,LOC107588083 coding upstream 49763 8310196 ~ 8348215 (+)
rrp36 LOC107715062,LOC107665499,LOC107561897,LOC107600960,LOC107757450 coding upstream 121884 8273234 ~ 8276094 (+)
LOC122327245 LOC107715077,LOC107665520,LOC107561910,LOC107561911,LOC107665518,LOC107561909 coding upstream 124800 8271118 ~ 8273178 (+)
LOC122327244 LOC107715077,LOC107665520,LOC107561910,LOC107561911,LOC107665518,LOC107561909 coding upstream 126962 8268850 ~ 8271016 (+)
lpl LOC107715086,LOC107665505,LOC107561902,LOC107588078 coding downstream 19024 8417720 ~ 8422512 (+)
LOC122327703 LOC107665504,LOC107561901,LOC107715087,LOC107757476,LOC107588077,LOC100331214 coding downstream 25901 8424597 ~ 8429824 (+)
fam32a fam32a,LOC107757479 coding downstream 69907 8468603 ~ 8470026 (+)
klf2a klf2a,LOC107592721,LOC107715091,LOC107665506,LOC107653623,LOC107757481,LOC107588070 coding downstream 142438 8541134 ~ 8543765 (+)
stil stil,LOC107715092,LOC107669819,LOC107653624,LOC107757483 coding downstream 171053 8569749 ~ 8577618 (+)
G150772 NA non-coding upstream 103171 8294594 ~ 8294807 (+)
G150771 NA non-coding upstream 106663 8291084 ~ 8291315 (+)
G150769 tmem264,LOC107757465,LOC107715063,LOC107653574,LOC107588123,LOC107665501,LOC107561895 non-coding upstream 108519 8286417 ~ 8289459 (+)
G150744 LOC107561915,LOC107715074,LOC107665528,LOC107600994 non-coding upstream 184647 8095822 ~ 8213331 (+)
LOC122327252 NA non-coding upstream 253639 8144012 ~ 8144339 (+)
G150846 NA non-coding downstream 59892 8458588 ~ 8458894 (+)
G150847 LOC107757454,LOC107588074,LOC107653622,LOC107715088,LOC107561899,LOC107665497 non-coding downstream 65943 8464639 ~ 8465025 (+)
G150850 NA non-coding downstream 67459 8466155 ~ 8467630 (+)
G150858 NA non-coding downstream 161706 8560402 ~ 8561173 (+)
G150860 NA non-coding downstream 168265 8566961 ~ 8567313 (+)
G150756 NA other upstream 229706 8167449 ~ 8168272 (+)
G150369 NA other upstream 1689087 6708488 ~ 6708891 (+)
ccnt2b ccnt2b,LOC107593034,LOC107663476,LOC107739335,LOC107586955,LOC107653589,LOC107745988 other upstream 1887522 6502914 ~ 6510456 (+)
npb npb,LOC107663585,LOC107587005,LOC107756033,LOC107704419,LOC107593099 other upstream 2158621 6236117 ~ 6239357 (+)
G149895 NA other upstream 2205319 6191647 ~ 6192659 (+)
G150862 s1pr1,LOC107715096,LOC107592715,LOC107669844,LOC107653630,LOC107588065 other downstream 215593 8614289 ~ 8617605 (+)
pdzk1ip1 NA other downstream 491926 8890622 ~ 8892199 (+)
G150940 NA other downstream 502447 8901143 ~ 8902311 (+)
G150945 NA other downstream 520583 8919279 ~ 8919780 (+)
G150946 NA other downstream 523002 8921698 ~ 8921967 (+)

Expression


Co-expression Network