lpl (LOC107715086,LOC107665505,LOC107561902,LOC107588078)


Basic Information

Item Value
gene id lpl
gene name LOC107715086,LOC107665505,LOC107561902,LOC107588078
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 8417720 ~ 8422512 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223054.1
CGGTACCGATTTAAACTCTTGAGAGAAACTCTGGACACAAGACATCTAAAGCAGCTGCTGCCCCCCGACTGGAATATTAACCTGTTGTAACGCTGTAAATGCCCGGATCTCAACGGCTTTTGCACTCAGTTTAAAAAGTTGTTGCATCCGtgatcattataaatatataatcatggGGAGAGTAAGCAGCGCTTGTTTTATATCTTGGATGTATTTGGTCTACATTTCCTCGGGTTTTGCAACTACGATTGAGCCAGAGATTGAATTTACCACTTTTAATAACATCATGGAAAACGCCACAGAATGGATGACGGACTTCAGCGACATCGAGTCCAAGTTTTCCTTCAGGACCAGTGAAGAACCTGAAGAAGATCTGTGCTACATAGTTCCAGGTCAACCCGAATCCATCAAAGAATGTAACTTCAATCCAGACACCAAGACTTTCATAGTTATTCACGGATGGACGGTCACGGGTATGTTTGAAAGCTGGGTTCCCAAACTGGTAACAGCCCTGTATGATCGAGAGCCAACAGCCAACGTGATCGTAGTGGACTGGCTGTCCCGTGCGCAACAGCACTACCCAACATCAGCTGCCTACACCAAACTAGTTGGCAGGGACGTGGCCAAGTTTGTCAACTGGTTACAGGCTGAGATTGACTATCCTTGGGAGAGGCTGCACCTGTTGGGCTACAGTCTTGGTGCTCATGTAGCGGGAATCGCTGGACTTCTCACCAAACATAAAGTTAACAGAATCACTGGCATGGATCCTGCTGGCCCTAGTTTTGAGTACGCAGATGCCCAAAGCACTCTTTCCCCCGATGATGCCCTTTTCGTAGACGTCCTTCACACTAACACTCGCGGCTCTCCGGATCGTAGCATTGGTATCCAGAGGCCGGTGGGTCACATTGACATCTACCCCAACGGAGGAACCTTCCAACCCGGCTGTGACCTCCAGAACACTGTGCTGATGGTGGCCACCACTGGTTTAAGAAACATGGATCAGATTGTGAAGTGCTCCCACGAGCGCTCCATTCACTTATTCATCGATTCGCTCGTGAACCAGGAGCAAGAGAGCATGGCTTACCGCTGCAGCTCCAAAGACAGCTTCAACAAGGGCATGTGCCTCAGCTGCCGCAAGAACCGCTGCAACAAGGTGGGCTACGGAGTCAATAAAATTCGCTCACGCAGGAGCAGCAAGATGTACATGAAGACCAGAGACGTGATGCCTTTTAAAGTTTTCCACTATCAAGTGAAGGTCCACTTCTTCGGCAAGACAAAGTTAAGCTACACTGATCAGCCCGTGAAGATCTCACTGTACGGAATCCACGGCGAGAAGGAAAATATCCCCTACATTCTGCCTGCTATGAACACAAACGCCACAGTGTCTTTCCTGCTTACCACGGACGCAGACATCGGAGAGCTGCTGATGGTCAAACTTCTCTGGGAGAAAGACAGCCTCATCAGCTGGCCGTGGTGGAACCCCGATACCTTCCACATCCGCAAACTACGCATCAAATCAGGAGAAAGACAGTCGAAGATCATCTTCAGTGCCAAAGATGGTGAATTTTCCTACCTTTCCCGTGGAGGTGAGGCCTCCGTCTTCGTGAAAGACAAAGAAGCCCAGTCGAGTCGCAAAAACCAGAGATTGCACAAGTTGAAGATGCACGGAAGTTCGTTCAAACAGAGCACAGAGTAAAGACACGCGTCAAAATCCACCTCTGCTGGGATCTGGCACGGAAAACTGGAACGGTAGAGACTTAACCTCTCCCGAATATTCGGACTAGTAACCTTCACCCAATGCAAATCCAGAAACACATCCTGCAAGAAAAAGGCATCTTGAAAACATTGCTGCTGtgcagttttaaaacaaaacagtcacttcggATACCTCTCAAGATGCTGTACAGGTCATCCGAGATCTAGCTAGACAACCTTTCCTGCATCTTTAATCCATAATAATGATCAAGTCTCTATGCAACATACTTACGCAAGTAATACGTTTCGGTCTATCTAAAAATGACTTGCACTTAGTTAAAATGTTTGGGTAGTTGTTCACCAAAGACTCTTCTTTTGGAGAAAGATGCCACTCGGTTTATTTGGTttatcaatattaatttttgaaaCTCCACTCAACCAGGTTATTTAGCCGTTTGTTTGGATGTACTGTGAATTAGGTTGAACCAAAGCAGTTTTCTAGCTATGCTAATCTTCTTTGCTTCAGTTTAGAAAGCAAAACTTTTAGATTTGTCTGTTGCAACCGAAAATCAGTCTGAATTGCTTTAACCAAAAAAATGGGACCAAATCCTCTCTCTGCTGAATCAAGATGaaattattactgtaaatatttgtaattgtcATTATATATGCTTACAAACATCTCTTTGGATGTCTacctttctttcatttcttgggTTATTGTGTCTGGCACAGGTCACTTTAAAGGCTTCGCCTCCCTTTGATTCAGTATTGTTTGGTAAAATCAACAAACGATTCagttttttctatatttttttggtCACTTCTTTCAGTTCAGCTGTGTTtggtcaaagaaaaaaaaatcaacaaacgATTCGGtgacttttgctttgtttttcgtCAACCTCTTCAAACCAACTCAGGTTGTTTTGTATGCGTTTCAAGAAAGTAATGAGGCAAGAAACTACTTTATGCATGAGCcagccaaaaattaaaacaagatgCATTTGATCTACGAAACACTGACAGTTTTCCAGGCCTGACAGGGTTGACTGCCCCAAGTAATAGCCACAAATACACCCAAACTGTTCCTTTTTcctatttattaaatgtatatatttgtatattaagcacatcattatatatatatatatatatatatatatatatatatatatatatatatatatatatatatataggtaagtGCTCTTGCCTTCTTTTGAATTATGTAGCCTctctatttttataaataaactttgacTGATTGAAGTCACTGGAAGGAAAAGCAATGATCAGTTGTGATCATATGAATCTATATGCCGTGCACTGTatgatgtcattttaataaacgtTACTGCATTATGTTA

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0005576 extracellular region cellular_component
GO:0004465 lipoprotein lipase activity molecular_function

KEGG:

id description
K01059 LPL; lipoprotein lipase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223054.1 True 3065 mRNA 0.43 10 8417720 8422512

Neighbor

gene id symbol gene type direction distance location
gpc1a gpc1a,LOC107715080,LOC107653615,LOC107665524,LOC107561905,LOC107588081 coding upstream 42328 8350241 ~ 8375392 (+)
gpc5b LOC107665526,LOC107561907,LOC107757472,LOC107653614,LOC107588083 coding upstream 69505 8310196 ~ 8348215 (+)
rrp36 LOC107715062,LOC107665499,LOC107561897,LOC107600960,LOC107757450 coding upstream 141626 8273234 ~ 8276094 (+)
LOC122327245 LOC107715077,LOC107665520,LOC107561910,LOC107561911,LOC107665518,LOC107561909 coding upstream 144542 8271118 ~ 8273178 (+)
LOC122327244 LOC107715077,LOC107665520,LOC107561910,LOC107561911,LOC107665518,LOC107561909 coding upstream 146704 8268850 ~ 8271016 (+)
LOC122327703 LOC107665504,LOC107561901,LOC107715087,LOC107757476,LOC107588077,LOC100331214 coding downstream 2085 8424597 ~ 8429824 (+)
fam32a fam32a,LOC107757479 coding downstream 46091 8468603 ~ 8470026 (+)
klf2a klf2a,LOC107592721,LOC107715091,LOC107665506,LOC107653623,LOC107757481,LOC107588070 coding downstream 118622 8541134 ~ 8543765 (+)
stil stil,LOC107715092,LOC107669819,LOC107653624,LOC107757483 coding downstream 147237 8569749 ~ 8577618 (+)
rc3h1a LOC107715093,LOC107653627,LOC107588069,LOC107757484 coding downstream 155618 8578130 ~ 8599620 (+)
G150829 NA non-coding upstream 19024 8397978 ~ 8398696 (+)
G150772 NA non-coding upstream 122913 8294594 ~ 8294807 (+)
G150771 NA non-coding upstream 126405 8291084 ~ 8291315 (+)
G150769 tmem264,LOC107757465,LOC107715063,LOC107653574,LOC107588123,LOC107665501,LOC107561895 non-coding upstream 128261 8286417 ~ 8289459 (+)
G150744 LOC107561915,LOC107715074,LOC107665528,LOC107600994 non-coding upstream 204389 8095822 ~ 8213331 (+)
G150846 NA non-coding downstream 36076 8458588 ~ 8458894 (+)
G150847 LOC107757454,LOC107588074,LOC107653622,LOC107715088,LOC107561899,LOC107665497 non-coding downstream 42127 8464639 ~ 8465025 (+)
G150850 NA non-coding downstream 43643 8466155 ~ 8467630 (+)
G150858 NA non-coding downstream 137890 8560402 ~ 8561173 (+)
G150860 NA non-coding downstream 144449 8566961 ~ 8567313 (+)
G150756 NA other upstream 249448 8167449 ~ 8168272 (+)
G150369 NA other upstream 1708829 6708488 ~ 6708891 (+)
ccnt2b ccnt2b,LOC107593034,LOC107663476,LOC107739335,LOC107586955,LOC107653589,LOC107745988 other upstream 1907264 6502914 ~ 6510456 (+)
npb npb,LOC107663585,LOC107587005,LOC107756033,LOC107704419,LOC107593099 other upstream 2178363 6236117 ~ 6239357 (+)
G149895 NA other upstream 2225061 6191647 ~ 6192659 (+)
G150862 s1pr1,LOC107715096,LOC107592715,LOC107669844,LOC107653630,LOC107588065 other downstream 191777 8614289 ~ 8617605 (+)
pdzk1ip1 NA other downstream 468110 8890622 ~ 8892199 (+)
G150940 NA other downstream 478631 8901143 ~ 8902311 (+)
G150945 NA other downstream 496767 8919279 ~ 8919780 (+)
G150946 NA other downstream 499186 8921698 ~ 8921967 (+)

Expression


Co-expression Network