G13924


Basic Information

Item Value
gene id G13924
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 2380892 ~ 2381140 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU15560
CATTTTTTTACTTTGTTAATAGTTATGACGAAAAAGACTGTGTATACATCTGACCTAAATGTTTATCTTATGTTAGAGGTTTTCAGCTTCGCTTGGCATTCTGATACAGCTCCCACAGGTGCACCTACATAAAGTATAACAGTGACACTACTATCATGTCTTATACATACCGCAAACTAAGGTGACACTTACCATAGAGAAACGTCCTACTCCAGTCATGATTGCGAATCTGTTTCTGGTTGATCGACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU15560 True 249 lncRNA 0.39 1 2380892 2381140

Neighbor

gene id symbol gene type direction distance location
CI01000001_02166796_02171151 CBX5 coding upstream 208713 2166796 ~ 2172179 (+)
CI01000001_02152125_02157921 NFE2 coding upstream 222269 2151932 ~ 2158623 (+)
CI01000001_02106280_02114656 ZNF740B, ZNF740 coding upstream 265641 2105979 ~ 2115251 (+)
CI01000001_02090800_02101722 CSAD coding upstream 279026 2090687 ~ 2101866 (+)
CI01000001_02084996_02088477 NA coding upstream 291560 2084996 ~ 2089332 (+)
CI01000001_02393859_02406849 CALCOCO1A coding downstream 12719 2393859 ~ 2407235 (+)
CI01000001_02492831_02495337 NA coding downstream 111291 2492431 ~ 2495411 (+)
CI01000001_02505727_02507172 MFSD5 coding downstream 124255 2505395 ~ 2507357 (+)
CI01000001_02526729_02544932 JPH2 coding downstream 145589 2526729 ~ 2544986 (+)
CI01000001_02567315_02569427 TUBA1C, TUBA1B, TUBA1A, TUBA1A.S, TUBA1D coding downstream 185535 2566675 ~ 2569605 (+)
G13922 NA non-coding upstream 12681 2367979 ~ 2368211 (+)
G13898 NA non-coding upstream 83681 2290804 ~ 2297211 (+)
G13887 NA non-coding upstream 123027 2257488 ~ 2257865 (+)
G13822 NA non-coding upstream 184719 2184418 ~ 2196173 (+)
G13869 NA non-coding downstream 44461 2425601 ~ 2440092 (+)
G13971 NA non-coding downstream 183594 2564734 ~ 2565307 (+)
G13973 NA non-coding downstream 196379 2577519 ~ 2577814 (+)
G14555 NA non-coding downstream 591719 2972859 ~ 2973084 (+)
G14597 NA non-coding downstream 697050 3078190 ~ 3078503 (+)
CI01000001_01668334_01670035 CAMK2N1B other upstream 709888 1667762 ~ 1671167 (+)
G13051 NA other upstream 1335740 1043713 ~ 1045152 (+)
CI01000001_00483853_00488761 VWA1 other upstream 1888835 483853 ~ 488825 (+)
G12614 NA other upstream 2069951 309144 ~ 310941 (+)
CI01000001_03618075_03620436 NA other downstream 1235108 3618075 ~ 3621451 (+)
G15794 NA other downstream 2680078 5061218 ~ 5064704 (+)
CI01000001_05279884_05287123 NA other downstream 2905609 5279837 ~ 5287698 (+)
G15995 NA other downstream 3330745 5711885 ~ 5714951 (+)
CI01000001_07531945_07539781 NA other downstream 5151432 7531541 ~ 7540586 (+)

Expression


Co-expression Network