LOC122327246 (LOC107715077,LOC107715076,LOC107561909,LOC107665520,LOC107561911,LOC107561910,LOC107665518)


Basic Information

Item Value
gene id LOC122327246
gene name LOC107715077,LOC107715076,LOC107561909,LOC107665520,LOC107561911,LOC107561910,LOC107665518
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 8249669 ~ 8256496 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043222455.1
TTGACTTTTGGCTCAGTAACATCTCAAACATGGCTCAGCAGGAATACAAAATGCTTGGGGACAAAATGTTTACCTACAAAGGAACTGTGATAACTTTGGCAGACAATCATGATCTCACTCCAGAATATATTGACAGTTTGGATGGTTTTGAAACAAAGGATGATGATGTCTTTGTTGTTACCTTCCCCAAATCTGGTACAGTGTGGACCCAACGGATCATGACCTTAATATATGCTGAAGATTTCCCAGACAAAGTCAATGAAACCACCCATGACCAGATGCCATGGCTGGAGTATCGAGCAATGCAGAATAATTACAACACACGACCATCTCCAAGACTCTTCTGCTCCCATTTACTCCAGCCGCTGATGCCCAAAATGCtgcaaagaaaaggaaaaGTCATCTATGTCATGAGAAACCCTAAAGACGTCATGGTGtcatatttccatttttccaaCAACATGAAAAACATGTATTCTTCCGAGAACTTTGATGAGATGCTGGAAAAATTCTTCACAGGATTCATGGTAGGTGGCTGTTGGTTTGATCATGTTAAAGGATGGAtcacaaataaagacaaatacgACATCCTGATCCTTACTTATGAAGAAATGATTAAGGACCTCAGATCTGTCGTTGTGAAAATCTGTGAGTTTGTGGGAAAGAATCTGTCGGACGCAGCAATTGATAAAGTGGTGGAAACAGCCACATTCAAGAACATGAAGAAAGACCCCGTGGCCAACTATGAATTTCTTCCTAAGGATATCACAGATCAGCCAAAAGGACTGTTTTTGCGCAAAGGAACAATTGGGGACTGGAAGATCTCTTTAACCGTGGCTCAAAGTGAATGTTTTGACCGCGTCTACCAAGAAAGAATGAAGGACGTACCTCTTAACTTTGTCTGGAACATCTCAGAATTGCATGGCTGAAAACTCAAGCTGTGGCATCCCCTCCATTATACAAATTAATGAGATAAAtcactattaaataaaaacttagcttttgctttttttttattgataaaacTGACTCAAAGCGATGACGGTCTCGAATATATGGCAGCTTTCATTGGCCAAGGCCCGTCCATGAAGCCGTTTGACTAGCATGTCAAACAACCAAACatgttaaacattaaaacattaaaaatgttgccATAATAA

Function

NR:

description
PREDICTED: amine sulfotransferase-like

GO:

id name namespace
GO:0008146 sulfotransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043222455.1 True 1160 mRNA 0.40 6 8249669 8256496

Neighbor

gene id symbol gene type direction distance location
LOC122328183 NA coding upstream 3402 8241412 ~ 8246267 (+)
LOC122327248 LOC107715077,LOC107665520,LOC107715076,LOC107561909,LOC107561910,LOC107561911,LOC107665518 coding upstream 15825 8230717 ~ 8233844 (+)
LOC122327241 LOC107561911,LOC107715077,LOC107665520,LOC107665518,LOC107561910 coding upstream 135856 8110386 ~ 8113813 (+)
gtpbp1l gtpbp1l,gtpbp1,LOC107665522,LOC107600991,LOC107653610,LOC107561891,LOC103371799 coding upstream 342203 7896686 ~ 7907466 (+)
bzw1a bzw1a,bzw1,LOC108414345,LOC107600987,LOC107565493,LOC108245120,LOC107384676 coding upstream 711391 7532490 ~ 7538278 (+)
LOC122327243 LOC107715077,LOC107561911,LOC107665520,LOC107561910,LOC107665518,LOC107561909 coding downstream 5308 8261804 ~ 8268258 (+)
LOC122327244 LOC107715077,LOC107665520,LOC107561910,LOC107561911,LOC107665518,LOC107561909 coding downstream 12354 8268850 ~ 8271016 (+)
LOC122327245 LOC107715077,LOC107665520,LOC107561910,LOC107561911,LOC107665518,LOC107561909 coding downstream 14622 8271118 ~ 8273178 (+)
rrp36 LOC107715062,LOC107665499,LOC107561897,LOC107600960,LOC107757450 coding downstream 16738 8273234 ~ 8276094 (+)
gpc5b LOC107665526,LOC107561907,LOC107757472,LOC107653614,LOC107588083 coding downstream 53700 8310196 ~ 8348215 (+)
G150744 LOC107561915,LOC107715074,LOC107665528,LOC107600994 non-coding upstream 36338 8095822 ~ 8213331 (+)
LOC122327252 NA non-coding upstream 105330 8144012 ~ 8144339 (+)
G150720 NA non-coding upstream 279435 7963787 ~ 7970234 (+)
LOC122327074 NA non-coding upstream 291105 7948879 ~ 7958564 (+)
G150708 NA non-coding upstream 356643 7892798 ~ 7893026 (+)
G150769 tmem264,LOC107757465,LOC107715063,LOC107653574,LOC107588123,LOC107665501,LOC107561895 non-coding downstream 29921 8286417 ~ 8289459 (+)
G150771 NA non-coding downstream 34588 8291084 ~ 8291315 (+)
G150772 NA non-coding downstream 38098 8294594 ~ 8294807 (+)
G150829 NA non-coding downstream 141482 8397978 ~ 8398696 (+)
G150846 NA non-coding downstream 202092 8458588 ~ 8458894 (+)
G150756 NA other upstream 81397 8167449 ~ 8168272 (+)
G150369 NA other upstream 1540778 6708488 ~ 6708891 (+)
ccnt2b ccnt2b,LOC107593034,LOC107663476,LOC107739335,LOC107586955,LOC107653589,LOC107745988 other upstream 1739213 6502914 ~ 6510456 (+)
npb npb,LOC107663585,LOC107587005,LOC107756033,LOC107704419,LOC107593099 other upstream 2010312 6236117 ~ 6239357 (+)
G149895 NA other upstream 2057010 6191647 ~ 6192659 (+)
G150862 s1pr1,LOC107715096,LOC107592715,LOC107669844,LOC107653630,LOC107588065 other downstream 357793 8614289 ~ 8617605 (+)
pdzk1ip1 NA other downstream 634126 8890622 ~ 8892199 (+)
G150940 NA other downstream 644647 8901143 ~ 8902311 (+)
G150945 NA other downstream 662783 8919279 ~ 8919780 (+)
G150946 NA other downstream 665202 8921698 ~ 8921967 (+)

Expression


Co-expression Network