LOC122327665 (LOC107751463,LOC107653569,LOC107687862,LOC107739318,LOC107687887,LOC107571702,LOC107751488,LOC107565491,LOC107565490)


Basic Information

Item Value
gene id LOC122327665
gene name LOC107751463,LOC107653569,LOC107687862,LOC107739318,LOC107687887,LOC107571702,LOC107751488,LOC107565491,LOC107565490
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056720.1
NCBI id CM032089.1
chromosome length 18002998
location 7503171 ~ 7504323 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043223137.1
ATGGACACAAGAGCCTCCCTCTCcattctgctgctgctgtttggcATTTCACAGGCATCTCCTCTCATGAAATTTGAAGGGGTTTTTGTAGAGCCTCAAATTGTGGACATCACTACAAGGATTTTGGAGTCCAACAATGgaTCTTCTGAAGTCTTGATTGAAGGAGATCTAGTGTTTCCCAAAACCAGAAATGCTCTCTACTGCTTTAACAACAACTGTTTCTGGAAGAAAAACTCTAACAACATAGTGGAGGTCCCTTACATAGTGAGCAGTGAATACTCCTCTTATGACAAATCAGTGATTACGAATGCTATGTCCACTTTTCACTCCAAAACCTGCATCCGCTTTGTGGCCAGATCAACTCAGACTGACTACATCAGCATTGAGAACAAAGATGGGTGCTACTCTTCTCTTGGCAGAACTGGTGGTAAACAGGTGGTCTCCCTCAACAGACAAGGCTGTGTGTATACCGGCATCGTTCAGCATGAGCTCAATCATGCCCTGGGCTTCTACCATGAACACACCAGGAGCGATCGTGACCAGTACGTCAAGATCAACTTTCAGAACATCTCTCCTGAACAGGCCTACAACTTCCAGAAACAAAACACCAACAACCAGAACACTCCATACGACTACGGCTCCGTCATGCACTATGGAAGAACAGCCTTCTCCATCCAACCCGGCCTGGAAACCATCACTCCCATTCCTGATGATACGGTGGAAATCGGACAGAGACAGGGACTGTCCAACATCGACATCCTGAGGATCAACAAGCTGTATGGATGCTGA

Function

NR:

description
PREDICTED: high choriolytic enzyme 1-like

GO: NA

KEGG:

id description
K08778 ASTL; astacin-like metalloendopeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043223137.1 True 789 mRNA 0.46 5 7503171 7504323

Neighbor

gene id symbol gene type direction distance location
LOC122327662 LOC107751463,LOC107687862,LOC107653569,LOC107739318,LOC107571702,LOC107687887,LOC107751488,LOC107565490,LOC107565491 coding upstream 1911 7500099 ~ 7501260 (+)
aox6 aox6,LOC107600982 coding upstream 12152 7477642 ~ 7491019 (+)
arl4ca arl4ca,arl4c,LOC107600967,LOC107739351,LOC105905671,LOC106575223 coding upstream 49735 7450747 ~ 7453436 (+)
sh3bp4a sh3bp4a,sh3bp4,LOC107571706,LOC107687864,LOC107751470,LOC107739319,LOC107653607 coding upstream 64502 7409342 ~ 7438669 (+)
stat1a LOC107754245,LOC107687870,LOC107600977,LOC107739326 coding upstream 678967 6811786 ~ 6824204 (+)
LOC122327663 LOC107739316,LOC107653609,LOC107600986 coding downstream 1329 7505652 ~ 7506790 (+)
LOC122327664 LOC107687863,LOC107739317,LOC107653608,LOC107751463,LOC107739318,LOC107653569,LOC107571702,LOC107687887,LOC107687862,LOC107565490 coding downstream 3752 7508075 ~ 7509220 (+)
LOC122327066 LOC107751463,LOC107653569,LOC107739318,LOC107571702,LOC107687862,LOC107687887,LOC107565490 coding downstream 23292 7527615 ~ 7528772 (+)
LOC122327063 LOC107751463,LOC107571702,LOC107653569,LOC107687862,LOC107739318,LOC107687887,LOC107565490 coding downstream 26349 7530672 ~ 7531834 (+)
bzw1a bzw1a,bzw1,LOC108414345,LOC107600987,LOC107565493,LOC108245120,LOC107384676 coding downstream 28167 7532490 ~ 7538278 (+)
LOC122327669 NA non-coding upstream 8570 7493874 ~ 7494601 (+)
G150595 NA non-coding upstream 64057 7439018 ~ 7439114 (+)
G150593 NA non-coding upstream 109239 7393704 ~ 7393932 (+)
G150591 NA non-coding upstream 115072 7332565 ~ 7388099 (+)
G150570 NA non-coding upstream 271604 7230679 ~ 7231567 (+)
G150656 NA non-coding downstream 126522 7630845 ~ 7631407 (+)
G150649 NA non-coding downstream 144243 7648566 ~ 7651337 (+)
G150696 NA non-coding downstream 353476 7857799 ~ 7866242 (+)
G150708 NA non-coding downstream 388475 7892798 ~ 7893026 (+)
LOC122327074 NA non-coding downstream 444556 7948879 ~ 7958564 (+)
G150369 NA other upstream 794280 6708488 ~ 6708891 (+)
ccnt2b ccnt2b,LOC107593034,LOC107663476,LOC107739335,LOC107586955,LOC107653589,LOC107745988 other upstream 992715 6502914 ~ 6510456 (+)
npb npb,LOC107663585,LOC107587005,LOC107756033,LOC107704419,LOC107593099 other upstream 1263814 6236117 ~ 6239357 (+)
G149895 NA other upstream 1310512 6191647 ~ 6192659 (+)
LOC122327524 NA other upstream 1490490 5923907 ~ 6012681 (+)
G150756 NA other downstream 663126 8167449 ~ 8168272 (+)
G150862 s1pr1,LOC107715096,LOC107592715,LOC107669844,LOC107653630,LOC107588065 other downstream 1109966 8614289 ~ 8617605 (+)
pdzk1ip1 NA other downstream 1386299 8890622 ~ 8892199 (+)
G150940 NA other downstream 1396820 8901143 ~ 8902311 (+)
G150945 NA other downstream 1414956 8919279 ~ 8919780 (+)

Expression


Co-expression Network