G15539


Basic Information

Item Value
gene id G15539
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 4450209 ~ 4450461 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17361
GGGATTCTTGAGCAAGTTACGTCGATTCTTAGCTAGAAAGCTAAAACAGGCGCCAGTCCTCTGGGGGTCTGGAAGCATCACAGGGCTGGATCTCCTCTCTCTCACAGCGCTCTCTCCAGTGTGAAGCACTGTCCACCAACTCCTTCCACTCACGACACACCAGCCGACAGACTCGCACCACCTGATTTGCAGGCAGGTACAGTAGGATCTCCTCAACCACAGCTAGAGGAACATCTGGAACATCTGACTGCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17361 True 253 lncRNA 0.54 1 4450209 4450461

Neighbor

gene id symbol gene type direction distance location
CI01000001_04402985_04419845 NA coding downstream 30332 4402780 ~ 4419877 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A coding downstream 50405 4392314 ~ 4399804 (-)
CI01000001_04378975_04384527 SDCBP2, SDCB1, SDCBP coding downstream 65623 4378885 ~ 4384586 (-)
CI01000001_04343042_04345953 NA coding downstream 103625 4342041 ~ 4346641 (-)
CI01000001_04334653_04338081 NA coding downstream 111440 4334163 ~ 4338769 (-)
CI01000001_04465168_04466295 CDC42.L, CDC42L2, CDC42P6, CDC42 coding upstream 14351 4463257 ~ 4466918 (-)
CI01000001_04468566_04523431 DNMT3BB.1 coding upstream 17748 4468209 ~ 4523431 (-)
CI01000001_04726550_04727511 PDPFB, PPDPFB, PPDPF coding upstream 275943 4725927 ~ 4728210 (-)
CI01000001_04732844_04744038 NA coding upstream 282383 4732844 ~ 4744038 (-)
CI01000001_04746153_04754209 NA coding upstream 295672 4746133 ~ 4754209 (-)
G15625 NA non-coding downstream 790 4448865 ~ 4449419 (-)
G15609 NA non-coding downstream 96882 4353081 ~ 4353327 (-)
G15608 NA non-coding downstream 98354 4349922 ~ 4351855 (-)
G15605 NA non-coding downstream 108991 4339284 ~ 4341218 (-)
G15546 NA non-coding upstream 5736 4456197 ~ 4458758 (-)
G15544 NA non-coding upstream 10514 4460975 ~ 4461433 (-)
G15537 NA non-coding upstream 11196 4461657 ~ 4461912 (-)
G15638 NA non-coding upstream 117283 4567744 ~ 4568009 (-)
CI01000001_02258523_02262621 NA other downstream 2152997 2258442 ~ 2263103 (-)
G14228 NA other downstream 2393731 2055974 ~ 2056478 (-)
G14219 NA other downstream 2455311 1994210 ~ 1994898 (-)
G14104 NA other downstream 2682751 1763669 ~ 1771468 (-)
G15736 NA other upstream 350440 4800901 ~ 4801395 (-)
G16332 NA other upstream 500228 4950689 ~ 4957842 (-)
G16462 NA other upstream 772316 5222777 ~ 5229585 (-)

Expression


Co-expression Network