G15609


Basic Information

Item Value
gene id G15609
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000001
NCBI id null
chromosome length 13537560
location 4353081 ~ 4353327 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU17440
CCGAGCTCGGCCTCCCACCGGATTGCGAATAAGCCTCCGAGAAGTCGTCTTGTGTGGTTTCTTCGACACTTTCAAAAAGCGGCGGTAATCAAGGCAGCTCTAAAGAAGCATGATGTCTTGACGGTTATCATGACGGTTCCAGACTACAGTTTTACTCTGACCTATCTGCGGAGGTTTTGCTTTAACGACGAGAGTTTTTTTTTTTTTTAAACATTTATTTTAGTTTTTTCTTTTTCACAGAACAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU17440 True 247 lncRNA 0.41 1 4353081 4353327

Neighbor

gene id symbol gene type direction distance location
CI01000001_04343042_04345953 NA coding downstream 6497 4342041 ~ 4346641 (-)
CI01000001_04334653_04338081 NA coding downstream 14312 4334163 ~ 4338769 (-)
CI01000001_04060101_04062122 NA coding downstream 290288 4059510 ~ 4062793 (-)
CI01000001_03853690_03853904 NA coding downstream 499177 3853670 ~ 3853904 (-)
CI01000001_03848621_03850592 NA coding downstream 502283 3848413 ~ 3850798 (-)
CI01000001_04378975_04384527 SDCBP2, SDCB1, SDCBP coding upstream 25558 4378885 ~ 4384586 (-)
CI01000001_04395469_04399381 FKBP1B.L, FKBP1B, FKBP1AA, FKBP1AB, FKBP1A, FKB1B, FKB1A coding upstream 42046 4392314 ~ 4399804 (-)
CI01000001_04402985_04419845 NA coding upstream 49453 4402780 ~ 4419877 (-)
CI01000001_04465168_04466295 CDC42.L, CDC42L2, CDC42P6, CDC42 coding upstream 111485 4463257 ~ 4466918 (-)
CI01000001_04468566_04523431 DNMT3BB.1 coding upstream 114882 4468209 ~ 4523431 (-)
G15608 NA non-coding downstream 1226 4349922 ~ 4351855 (-)
G15605 NA non-coding downstream 11863 4339284 ~ 4341218 (-)
G15533 NA non-coding downstream 36013 4270132 ~ 4317068 (-)
G15529 NA non-coding downstream 41480 4299568 ~ 4311601 (-)
G15625 NA non-coding upstream 95538 4448865 ~ 4449419 (-)
G15539 NA non-coding upstream 96882 4450209 ~ 4450461 (-)
G15546 NA non-coding upstream 102870 4456197 ~ 4458758 (-)
G15544 NA non-coding upstream 107648 4460975 ~ 4461433 (-)
G15537 NA non-coding upstream 108330 4461657 ~ 4461912 (-)
CI01000001_02258523_02262621 NA other downstream 2055869 2258442 ~ 2263103 (-)
G14228 NA other downstream 2296603 2055974 ~ 2056478 (-)
G14219 NA other downstream 2358183 1994210 ~ 1994898 (-)
G14104 NA other downstream 2585623 1763669 ~ 1771468 (-)
CI01000001_00362143_00378213 NA other downstream 3955948 361614 ~ 378213 (-)
CI01000001_04726550_04727511 PDPFB, PPDPFB, PPDPF other upstream 215755 4725927 ~ 4728210 (-)
G15736 NA other upstream 447574 4800901 ~ 4801395 (-)
G16332 NA other upstream 597362 4950689 ~ 4957842 (-)

Expression


Co-expression Network