G154108 (plcg1)


Basic Information

Item Value
gene id G154108
gene name plcg1
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 1964273 ~ 1965117 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU228200
GTCAAGACAGCTTGGATATCGACATTCGCCTAAATATAGTTTAACCGAAGAAAGCCATAAGAGTTGACAAGGATGAATTGGATTGTCCTATTGTCCTCGATTGGATAAaggtgtctgctaaatgactaaacgtAAATGCGCATGAAGCGTCTCCGTCAGTTCTCTGGACTCACTCTTTGCTCTCGTGAGCGTTGGTCTGAGGCACCGGCTCGGTCAGCTTCATCTCAAACTCGTTGCAGCGCAGAGGCACCTGCTGGTAATGTGTGATGAGGGCGAACAGAGTGTCGAACACCAGGTTATCCGTCAGGTAGAACTTGGGGCTGCCGGCTTCCTGCCGAGAGTGAATCCTGCAGTGCTGAACCCGACCGGACCGCCGGAAGGATCCGTCCGGCGCACCGGTCTCCAGACAGTACTCCGACAGCAGCCGTTCTGCGATCTGACGCCCGTCACGTCCCGCTCCCAGTTTCCCGTGAAACCACTTCTCCGTCACGTGCTGGTCCATGCCGTTACAGATCTGCGGAGGAACAGCAGCTACAGGCTGAACGCTCAAGAACCTGCCTTCAAAGAGCTACTGCTGCCGCTCGGCATCATGAACGTCTTTAAAAGACGTCTCaaggcc

Function

symbol description
plcg1 Predicted to enable phosphatidylinositol phospholipase C activity. Acts upstream of or within several processes, including blood vessel morphogenesis; fin regeneration; and hemopoiesis. Is expressed in brain; intermediate cell mass of mesoderm; ovary; pericardial region; and vasculature. Orthologous to human PLCG1 (phospholipase C gamma 1).

NR:

description
Phospholipase C, gamma 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU228200 True 619 TUCP 0.54 2 1964273 1965117

Neighbor

gene id symbol gene type direction distance location
zhx3b zhx3,LOC107663202,LOC107747727,LOC107703618,LOC107713571,LOC107562626,LOC107557488 coding upstream 12145 1941304 ~ 1952128 (+)
rnf114 rnf114,LOC107713569,LOC107724213 coding upstream 306690 1652564 ~ 1657583 (+)
pacsin1a pacsin1a,LOC107680734,LOC107738788,LOC107678076,LOC107571226,LOC107557481,LOC108276336 coding upstream 416388 1520315 ~ 1547885 (+)
nudt3a nudt3a,nudt3,LOC107738789,LOC107678075,LOC107724214,LOC107680732 coding upstream 445844 1513396 ~ 1518429 (+)
opn7b opn7b,LOC107724216,LOC107572883,LOC107567959 coding upstream 481632 1445480 ~ 1482641 (+)
LOC122328839 LOC107549167,LOC107723011 coding downstream 106622 2071739 ~ 2087419 (+)
LOC122328881 NA coding downstream 123195 2088312 ~ 2102681 (+)
ndnf ndnf,LOC107549170,LOC107723023,LOC107698518,LOC107558793,LOC107710242,LOC107669702 coding downstream 322864 2287981 ~ 2304033 (+)
slc34a2b LOC107698513,LOC107570774,LOC107669705,LOC107710230 coding downstream 486573 2451690 ~ 2461440 (+)
psmb11b LOC107549161,LOC107719954,LOC103370428,LOC105925323,LOC102212057 coding downstream 514542 2479659 ~ 2483007 (+)
G154074 NA non-coding upstream 158186 1805663 ~ 1806087 (+)
G154034 NA non-coding upstream 252730 1711342 ~ 1711543 (+)
G154031 NA non-coding upstream 258920 1705152 ~ 1705353 (+)
G154029 NA non-coding upstream 268242 1695824 ~ 1696031 (+)
G154028 NA non-coding upstream 268677 1695257 ~ 1695596 (+)
G154122 NA non-coding downstream 28976 1994093 ~ 1995156 (+)
G154130 LOC107557491,LOC107723017,LOC107663200 non-coding downstream 40215 2005332 ~ 2023144 (+)
G154155 NA non-coding downstream 143217 2108334 ~ 2108572 (+)
G154156 LOC107558790,LOC107669693 non-coding downstream 144276 2109393 ~ 2111333 (+)
G154146 tcp1,LOC107669696,LOC107549175,LOC107558788,LOC107694622 non-coding downstream 167893 2133010 ~ 2133923 (+)
G154092 NA other upstream 9590 1952171 ~ 1954683 (+)
mafba mafba,LOC107680735,LOC107562627,LOC107557486,LOC107703617,LOC107713570 other upstream 259697 1699034 ~ 1704576 (+)
hmga1a LOC107738790,LOC107724210,LOC107690106,LOC107567961,LOC107678077 other upstream 438526 1499071 ~ 1525747 (+)
LOC122328339 NA other upstream 684066 1275737 ~ 1280207 (+)
LOC122328753 LOC107704474,LOC107710267,LOC107730816 other upstream 878848 1082847 ~ 1085425 (+)
snai1b LOC107694621,LOC107723015,LOC107549169,LOC107558792,LOC107738552,LOC107669687 other downstream 84915 2050032 ~ 2053975 (+)
LOC122328880 LOC107723010,LOC107683284,LOC107694619 other downstream 103551 2068668 ~ 2071399 (+)
LOC122328869 LOC107723021,LOC107694620,LOC107577481 other downstream 164881 2129998 ~ 2132833 (+)
prdm5 prdm5,LOC107698519,LOC107669703 other downstream 347605 2312722 ~ 2356727 (+)
G154424 NA other downstream 958265 2923382 ~ 2956725 (+)

Expression


Co-expression Network