G154837


Basic Information

Item Value
gene id G154837
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 4249319 ~ 4305432 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU229284
GGGCGCCCCGGTTGGGGTCGTGGCAGAAAAGAATACCCTAGTTAAAGATGGCAACCCTCCGGGTTTGTAAGACCAATACTCTACAAGCGAAAGACGTGATGAGTTACACGTGATATAGTATGTTTACTGGCCATTTCATGAGTCACCTATACATCTCTCTACGACGTGGTCTGTACAGATTCACTACAGTCTATTGCTATTAAATAATCCcgactattttttttcttctgtctttaagtgtatatatagcatataataaaaatatactgagGAAATTGCTTCTAGTCTCGAAAGCACGTTACATTTTCGATCAAAGGGACACGGGTGGTCCGCGATCTATACATTATGGAGCGGAAGGCTTCGCGTAAAACGGTCGAGAGAGTGAGGAGGTCCTGATAGAGGTGTGTCTGCGACACGTGACATCAAGTGTGACCCGATCAAGTCCTGAAGAAGTACTTCCACTCGGACGAAGCTGAATAAAGAGGAGACGTTTATACGCCGTAACACCAGGTGATGAAAGAAATGCTTTAACCTTATCAAGGCGGGTGAGGGGGGAGGACAAACAGATACTTGTAAAACCAACGGAACAAATCTATACATATATCTACAGGTGTATGCATACAGAGGGCCGGAGGACTGCTCTCCAGACAGAGTTTTTAGTAGTAACGAGGGGCGTGGCATTCGAGCGCTTTCCTCCCTCCCATGCAGCAGAGGGCAGCGTCTCTATTTGTCCTTGTTCTCGTAAAACTCCACCCAGCGGCTCTCGAAGAAGCGGCGCATGGCGTGGCCGGCCTTGCCCACCTCCGACGTGTCCTCGTTGAAGAGCTCGCAGTTGTTGAAGACCAGCTGAGCGTCGGCGGCAAACTCCTCACAGCTGCAGT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229284 True 881 lncRNA 0.48 2 4249319 4305432

Neighbor

gene id symbol gene type direction distance location
syt2a syt2a,LOC107707366,LOC107673174,LOC107598127,LOC107601356 coding upstream 77395 4155742 ~ 4171924 (+)
LOC122328782 LOC107673421 coding upstream 138744 4094381 ~ 4110575 (+)
mybpha mybphl,mybpha,LOC107601323,LOC107696960,LOC107707373,LOC107746526 coding upstream 158018 4070796 ~ 4091301 (+)
LOC122328783 NA coding upstream 178533 4059298 ~ 4070786 (+)
LOC122329177 NA coding upstream 189987 4052531 ~ 4059332 (+)
p4htma zgc:158254,LOC107697012,LOC107705746,LOC107673293,LOC107601351 coding downstream 32768 4338200 ~ 4349928 (+)
si:ch211-117c9.5 si:ch211-117c9.5,slc6a8,LOC107601348,LOC107697011,LOC107566000,LOC107673283,LOC107750894,LOC105906418 coding downstream 46267 4351699 ~ 4362428 (+)
LOC122329078 LOC107696958,LOC107601318,LOC107723121,LOC107705667 coding downstream 226500 4531932 ~ 4539195 (+)
samd10b samd10b,samd10,LOC107697008,LOC107705743,LOC107673587 coding downstream 275111 4580543 ~ 4633899 (+)
znf512b si:dkey-256k13.2,LOC107601346,LOC107697007,LOC107723120,LOC107673337,LOC107705742,LOC107570867 coding downstream 336494 4641926 ~ 4686806 (+)
G154815 NA non-coding upstream 87699 4111382 ~ 4161620 (+)
G154759 NA non-coding upstream 200322 4048746 ~ 4048997 (+)
G154712 NA non-coding upstream 361563 3887121 ~ 3887756 (+)
G154699 NA non-coding upstream 445555 3800350 ~ 3803764 (+)
G154698 NA non-coding upstream 450035 3797354 ~ 3799284 (+)
G154934 NA non-coding downstream 245601 4551033 ~ 4553168 (+)
G154972 NA non-coding downstream 466558 4771990 ~ 4816862 (+)
G154989 NA non-coding downstream 530561 4835993 ~ 4838432 (+)
G154997 ddx23 non-coding downstream 558893 4864325 ~ 4915121 (+)
G155024 NA non-coding downstream 671237 4976669 ~ 4977310 (+)
ube2t ube2t,LOC107746510,LOC107707375,LOC107673550 other upstream 552297 3694652 ~ 3697022 (+)
mitfb LOC107704626,LOC107709243,LOC107748437,LOC108438070,LOC107687304,LOC107558923,LOC107709232 other upstream 1152284 3060509 ~ 3097035 (+)
rbm10 LOC107709225,LOC107687301,LOC107704624,LOC107748436 other upstream 1239302 2995169 ~ 3010017 (+)
G154424 NA other upstream 1292594 2923382 ~ 2956725 (+)
LOC122328459 g6pd,LOC107723128,LOC107697003,LOC107594489 other downstream 511933 4817365 ~ 4835484 (+)
si:ch211-220i18.4 LOC107551506,LOC107666586,LOC107559855,LOC107681367,LOC107705652,LOC108275527,LOC107100285 other downstream 2287170 6592602 ~ 6598532 (+)
G155561 NA other downstream 2920562 7225994 ~ 7238919 (+)
tcea2 tcea2,LOC107681409,LOC107551521,LOC107705683,LOC107571665,LOC107666524 other downstream 2992928 7298360 ~ 7305534 (+)
LOC122328506 klhl14,LOC107677170,LOC107599684,LOC107554641,LOC107717384 other downstream 4016273 8321705 ~ 8333376 (+)

Expression


Co-expression Network