LOC122329177


Basic Information

Item Value
gene id LOC122329177
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 4052531 ~ 4059332 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043225374.1
AGCCTATGTCATATTTCTAGAGAGAAGAGgggaggaaggaaggaagacGATCATCTAATTCAGGATGTCGGTTCACCACATTTCAGATCGGGAAGCTTCCAACTTTAACTGCTAAAACTGTCAGATGCAGCATAACAACTTCGGTCTAAATTTTGTTTCAAACTGAGGAAATTTGTGACAGATGTCGCTTTTTTGtttTGAACGTCTAATCTAACAGGGCTACTGACAATAAGGTTTGAGGAACAAGGAAGTCCAAAAGCTTTGTTCGTGCTGGCTCTGCTTTGACTACAGCTACAAATGGAAAGGTTCAAAATCTTAGTTTTGACAGTGGCAGTGTGTGCGCAAGCAATGTCTCAAGACAGCACTACTGAATCTCCAGTTCAGATTTCCAAGCCCAAGATAACTGTGAATCCAGATCATGGGGTGCTGTACAATACTGAGAGCGTCACTCTGAGCTGTGAGATCTCTGAAGGACCCCCGGGGTTACAGTATGACTGGTACAAGGACTCAAAAGATCTTGGTCAACATCAGCGCAGCATCACTGTGAACGAGAACGGAAAATATGAATGCAaaggaaaaagaagagagaCTCGGTCTGAAAAAAGTGATGTTTACACTTTAACTCTGAAAGCTCTACCTAAACCACAAATCCAGTCTGCATGGACAGAAGCATTTACTGGTGAAGAAGTCTCTTTGCAGTGTTTGATTCCAAACGATTCTGAAAACTGGACTTATATGTGGTTCAGGGGCTCAGACAAGATTGTCTCCGGTGCTGAATCAAACATGAAAGGAAACAGTCTCACACTCTCAGTTCAGTCCAGTCATGACGGGGAGTATGTGTGTCAAGCTGAGCTGCACCACAGAAAGGTGACGACTGAAAAAAGTGCACCGCATTCGTTAACGGTTAAAGCTCTGCCTAAACCGCAAATCCAGTCTGAATGGACAGAAGCGTTTACTGGTGAAGAAGTCTCTTTGCAGTGTTTGATTCCAAACGATTCTGAAAACTGGACTTATATGTGGTTCAGGGCTCAGACAAGATTGTCTCCGGTGCTGAATCAAACATGA

Function

GO: NA

KEGG:

id description
ko05320 Autoimmune thyroid disease
ko05330 Allograft rejection
ko05332 Graft-versus-host disease

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043225374.1 True 1065 mRNA 0.43 7 4052531 4059332

Neighbor

gene id symbol gene type direction distance location
nav1a nav1a,LOC107673164,LOC107598126,LOC107696940,LOC107746511,LOC107707368 coding upstream 4571 3938707 ~ 4047960 (+)
LOC122328889 LOC107697023 coding upstream 169727 3868102 ~ 3882804 (+)
smpd2a LOC107696962,LOC107559169,LOC107598121,LOC107673059,LOC107707384 coding upstream 186401 3855092 ~ 3866130 (+)
tead3a tead3a,LOC107697024,LOC107746506,LOC107707383,LOC107673091,LOC107598123 coding upstream 198095 3828587 ~ 3854436 (+)
tulp1a LOC107559175,LOC107697025 coding upstream 225951 3817232 ~ 3826580 (+)
mybpha mybphl,mybpha,LOC107601323,LOC107696960,LOC107707373,LOC107746526 coding downstream 11464 4070796 ~ 4091301 (+)
LOC122328782 LOC107673421 coding downstream 35049 4094381 ~ 4110575 (+)
syt2a syt2a,LOC107707366,LOC107673174,LOC107598127,LOC107601356 coding downstream 96410 4155742 ~ 4171924 (+)
spo11 spo11 coding downstream 196570 4255902 ~ 4267013 (+)
rbm38 rbm38,LOC107705751,LOC107673236,LOC107697017 coding downstream 210514 4269846 ~ 4284232 (+)
G154759 NA non-coding upstream 3534 4048746 ~ 4048997 (+)
G154712 NA non-coding upstream 164775 3887121 ~ 3887756 (+)
G154699 NA non-coding upstream 248767 3800350 ~ 3803764 (+)
G154698 NA non-coding upstream 253247 3797354 ~ 3799284 (+)
G154690 NA non-coding upstream 323721 3699109 ~ 3728810 (+)
G154815 NA non-coding downstream 52050 4111382 ~ 4161620 (+)
G154837 NA non-coding downstream 189987 4249319 ~ 4305432 (+)
G154934 NA non-coding downstream 491701 4551033 ~ 4553168 (+)
G154972 NA non-coding downstream 712658 4771990 ~ 4816862 (+)
G154989 NA non-coding downstream 776661 4835993 ~ 4838432 (+)
ube2t ube2t,LOC107746510,LOC107707375,LOC107673550 other upstream 355509 3694652 ~ 3697022 (+)
mitfb LOC107704626,LOC107709243,LOC107748437,LOC108438070,LOC107687304,LOC107558923,LOC107709232 other upstream 955496 3060509 ~ 3097035 (+)
rbm10 LOC107709225,LOC107687301,LOC107704624,LOC107748436 other upstream 1042514 2995169 ~ 3010017 (+)
G154424 NA other upstream 1095806 2923382 ~ 2956725 (+)
LOC122328459 g6pd,LOC107723128,LOC107697003,LOC107594489 other downstream 758033 4817365 ~ 4835484 (+)
si:ch211-220i18.4 LOC107551506,LOC107666586,LOC107559855,LOC107681367,LOC107705652,LOC108275527,LOC107100285 other downstream 2533270 6592602 ~ 6598532 (+)
G155561 NA other downstream 3166662 7225994 ~ 7238919 (+)
tcea2 tcea2,LOC107681409,LOC107551521,LOC107705683,LOC107571665,LOC107666524 other downstream 3239028 7298360 ~ 7305534 (+)
LOC122328506 klhl14,LOC107677170,LOC107599684,LOC107554641,LOC107717384 other downstream 4262373 8321705 ~ 8333376 (+)

Expression


Co-expression Network