G154690


Basic Information

Item Value
gene id G154690
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056721.1
NCBI id CM032090.1
chromosome length 19062720
location 3699109 ~ 3728810 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU229062
aatacaacacCCATGATGCATCAGCGGTAAAGGCGCGCGACGCACATTTTGGCGCGCAAACGAAAGACCTGCTGTTTAAAGAAGCGTTCAGAAGTCGACCAAAACAACTCCATCCTCAGATTTTAAACACAGTAAACCAATACACGGAGACGAAAGAAGACCAAGTAATGGACAGTTGATGTTGGAATCCAGAAGAACAAGGACTTTGAGGTTGTAGAGGCCTTGGAACACGGGGCCAGGGATGTGTCTCAGGTGGTTGCCCGAGAGTCTCCTGTGGAAGGACAAAAGAAGTGGTTTGGTTCACTTGCAGTCCAACAAATTGATGACTTTAACAGAGAGAAGAGAATCTGGTAAATTCATAAAGACgagtatgaatgtgtgtgcgCTCAAGAGCTCATGGTGAAAACAAAAGTGAGAGATCTCCTTGGAAGCAAGAACCACAGCAGCTGGGGTTCAGATCTCTCGGCCGCTGGTCTTTACCGCTCACGTACAGAAATCTCTCTTTTGTATGGTCTCCAAACATGTCAACACATTTTGAAAGCAGAGCCAAGATATGAATGCGCTCTAAGCTCCTGTGGCAACAAACATGTCATAGTACAAGTGAATTTATACACAATGGCTAAAGATAAATACCCCTTATAAAATGGCCGTATACTGTACAGATAACAACCAACAGGAGCATCGTGGCTGATAGCTACCTTTGGAAAGTACTCGAGACACAGGAAAGACGTTCCCAAAGAGAGCGAGAGCAAATATCAACCAGCTGTAGGCTTACCCATCCGGACTAATCAATTTGTTTATCAAACAAATCACTTAATAAGCTTTCGTGCCAGTTTTTTTCCTGGGTGGCAGAGTTTGAGGAAAGTCTGTCGAAGCCTCACAAGGAGTCATGACAGGCTAAACAGGACCACCCATACCTCCAGACTTCTTTGCCTCAAAGTTGCTCCATCCTGCCGGAATAGCCTCAATCTGCTCATGTACtccaaatgattatttttttgtgtgacaAGATGAACGTTTTGCAGAGAATTGCTGCCAATGTTTAGCATGTAAGTCAGCTTAGCTAATGTGATGGGTGCGACAGCTCTGGCAAAGCAACAACTGTGTTGTATACAGGCACATTAAGGGCCACACGAGCCCAGAAAGCAGAACGACAAAACTCAGAATTGGGTCTATGTCAAGGTCTGACAGATCATACTCCCTTACGAGCTTACACACACTACCGTCTTCTGCCATCGAGCCATGAAGTCTCTGAGGTTTTTAATGGCTATCACTTCATGTTGTGCCAGACCACACTCCCATCCGTTGACTCTATTTCTGGTAAGACCGTGTGCCGccattctttcacaaacatttgttttgcgcagggcaagagacagagggaaATAAAGCAGGGGGATGGAGGGGCTGGGGaaggcaaaaataaaagtgtcagATTTGGAGGCTGCGAAGCTTAGCGGTTCACCCCGTGTAAATAGGCCAGTGATGGTTTCACATGCGTGTCGGATGAGGTTTCAGGCACGTACCACAGCAAGCTGTTCTGCTGAAAGCTCGTGCCAGCCCTGCGGTCAGCTTTTATCCCTCGTTATAATTCAGTCATGTATCTAAACACTGGAGCTTTCTGCTTTATGTATTCTCTCACATTACAGACAAACATGGCTTTAATGCTAATTGTCTTAAGCCACTTGTGTCAACATGTTGTATATTCTTCTGAAAAATGACGAGTGTATTGTTATGAATATTAAGAATGTTTGTAAAGTCTTCAAAATTGATTCTGGCCATGGGAATGAAATGAGAATTCTTTAATATCTCAATGCAATTACTTTTTGATGCTTTGTATACACAGAAAGACAAATCCAGTAGGATTTCGTCACTCAGTGGAAAGTATCCACAAATTGgaattttcttttctgtatATGAAGTCTTTCTCAATACAGCAGTGGTTTCTGATCCTTTTCCTGGAGGGCCATTGTCATGCAGattttagctccaacttgcccCATCACACCTGTCTAGATATTTCTCAACAGTAAAATTTCTCTCCATTAGCAAAGCCTGCACTAcatgttttaatgcagatttacttcatttgaaaaactggtctgCATTGAGTCATGTGAACTCGTATTATTTGCAGTCAATTTGAACCCAATCCACGCTAAACTGAATCTGTGAGCCTATATTCCAGAGGTAGTCAAACCTGCTCCTGGAGGTCTACCTTAATGTTACAACACACCTGCCCTTTATCATCAAGTAATCCTGAACACCTTTATtacattcaggtgtgtttgttaagggttggagctgaactctgctgTAGCCCACCGAAAGCATTGTTGGCAACCAATGCCTTCTAACCTAGTCATATTTTAgtagcattttaatattctgtGCAGCTTGTCTCAGAATAAATTGCCTTTAGAGAATGAAACTGTTGCAACCTCTTGTCTCTAGTCGTTAACTGATGGTGCTCAAGGTAGTATAGTCTCATTAAATACTTGGGCAGATGCTAGGGATCTACTACCACACAAGTTTTTCCTTTAGAGTTCCACGTCAACACTAACCAAACACACCAAGGTCAGAGGGTTGCTAGAAAGCTACAGGCGGGTGAGATTTTATCAAGGGTAGAGCAGGACTGTGGCTCTTCAGGACTGATGTCGGCCACCCCTATACAACATGTACTACCTCAAACCCAGCAATACAACATTAAAAGAGATCAGTGAAGGCAGGATGAGGGGGGGGTGTTCTGAGGTTCAGAACAAGCAATCAAACCAAGTGTGAAAACAGCCTAAGAGACACTGCATTAAACAGAACCCCTTTGAACCTTTCCCTCATAACCTGTGCCAGCCTTACTAGTCTTTGCTCTGAGTCCAAAATTATCCAAACTGCCCTCAACACTCCAC

Function

GO:

id name namespace
GO:0000003 reproduction biological_process
GO:0022412 cellular process involved in reproduction in multicellular organism biological_process
GO:0022414 reproductive process biological_process
GO:0003006 developmental process involved in reproduction biological_process
GO:0046332 SMAD binding molecular_function
GO:0070412 R-SMAD binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU229062 True 2903 lncRNA 0.43 3 3699109 3728810

Neighbor

gene id symbol gene type direction distance location
LOC122328357 LOC107559166,LOC107696944,LOC107559158,LOC107746523,LOC107696945 coding upstream 148 3697205 ~ 3698961 (+)
LOC122329176 LOC107559158,LOC107746523,LOC107559166,LOC107696944,LOC107696945 coding upstream 5128 3691282 ~ 3693981 (+)
LOC122328631 LOC107696966,LOC107746508,LOC107559163 coding upstream 25517 3669197 ~ 3673592 (+)
kcna10a kcna10a,LOC107696967,LOC107746531,LOC107559162,LOC107746341,LOC107673534,LOC107598151 coding upstream 43504 3650109 ~ 3655605 (+)
kcna2b kcna2b,LOC107746332,LOC107711719,LOC107697029,LOC107673029,LOC107566069,LOC107598117,LOC108438074 coding upstream 67344 3628747 ~ 3631765 (+)
tulp1a LOC107559175,LOC107697025 coding downstream 88422 3817232 ~ 3826580 (+)
tead3a tead3a,LOC107697024,LOC107746506,LOC107707383,LOC107673091,LOC107598123 coding downstream 99777 3828587 ~ 3854436 (+)
smpd2a LOC107696962,LOC107559169,LOC107598121,LOC107673059,LOC107707384 coding downstream 126282 3855092 ~ 3866130 (+)
LOC122328889 LOC107697023 coding downstream 139292 3868102 ~ 3882804 (+)
nav1a nav1a,LOC107673164,LOC107598126,LOC107696940,LOC107746511,LOC107707368 coding downstream 209897 3938707 ~ 4047960 (+)
LOC122328634 NA non-coding upstream 13001 3678719 ~ 3686108 (+)
G154673 NA non-coding upstream 41704 3657099 ~ 3657405 (+)
G154667 NA non-coding upstream 58428 3639863 ~ 3640681 (+)
G154661 NA non-coding upstream 62832 3634764 ~ 3636277 (+)
LOC122329308 NA non-coding upstream 84265 3608363 ~ 3614844 (+)
G154698 NA non-coding downstream 68544 3797354 ~ 3799284 (+)
G154699 NA non-coding downstream 71540 3800350 ~ 3803764 (+)
G154712 NA non-coding downstream 158311 3887121 ~ 3887756 (+)
G154759 NA non-coding downstream 319936 4048746 ~ 4048997 (+)
G154815 NA non-coding downstream 382572 4111382 ~ 4161620 (+)
ube2t ube2t,LOC107746510,LOC107707375,LOC107673550 other upstream 2087 3694652 ~ 3697022 (+)
mitfb LOC107704626,LOC107709243,LOC107748437,LOC108438070,LOC107687304,LOC107558923,LOC107709232 other upstream 602074 3060509 ~ 3097035 (+)
rbm10 LOC107709225,LOC107687301,LOC107704624,LOC107748436 other upstream 689092 2995169 ~ 3010017 (+)
G154424 NA other upstream 742384 2923382 ~ 2956725 (+)
LOC122329169 NA other upstream 755303 2925308 ~ 2943806 (+)
LOC122328459 g6pd,LOC107723128,LOC107697003,LOC107594489 other downstream 1088555 4817365 ~ 4835484 (+)
si:ch211-220i18.4 LOC107551506,LOC107666586,LOC107559855,LOC107681367,LOC107705652,LOC108275527,LOC107100285 other downstream 2863792 6592602 ~ 6598532 (+)
G155561 NA other downstream 3497184 7225994 ~ 7238919 (+)
tcea2 tcea2,LOC107681409,LOC107551521,LOC107705683,LOC107571665,LOC107666524 other downstream 3569550 7298360 ~ 7305534 (+)
LOC122328506 klhl14,LOC107677170,LOC107599684,LOC107554641,LOC107717384 other downstream 4592895 8321705 ~ 8333376 (+)

Expression


Co-expression Network